RNA–Protein interactions for RNA: ENST00000294728.6

VCAM1-201, Transcript of vascular cell adhesion molecule 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCAM1, Length 3,083 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAM1-201ENST00000294728 ATRQ13535 2644 aa4.42□□□□□ -1.7
VCAM1-201ENST00000294728 ZANQ9Y493 2812 aa4.42□□□□□ -1.7
VCAM1-201ENST00000294728 IGHV3OR16-12A0A075B7B8 117 aa4.42□□□□□ -1.7
VCAM1-201ENST00000294728 F5H768 121 aa4.42□□□□□ -1.7
VCAM1-201ENST00000294728 DEFB114Q30KQ6 69 aa4.42□□□□□ -1.7
VCAM1-201ENST00000294728 Q6ZSN1 163 aa4.42□□□□□ -1.7
VCAM1-201ENST00000294728 CDKN2A-AS1Q9UH64 79 aa4.42□□□□□ -1.7
VCAM1-201ENST00000294728 SMIM1B2RUZ4 78 aa4.42□□□□□ -1.7
VCAM1-201ENST00000294728 RPL28P46779 137 aaKnown RBP4.42□□□□□ -1.7
VCAM1-201ENST00000294728 DEFB131AP59861 70 aa4.42□□□□□ -1.7
VCAM1-201ENST00000294728 TMEM95Q3KNT9 176 aa4.42□□□□□ -1.7
VCAM1-201ENST00000294728 TTC32Q5I0X7 151 aa4.42□□□□□ -1.7
VCAM1-201ENST00000294728 C15orf53Q8NAA6 179 aa4.42□□□□□ -1.7
VCAM1-201ENST00000294728 LINC01561Q8N1V8 128 aa4.41□□□□□ -1.7
VCAM1-201ENST00000294728 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.41□□□□□ -1.7
VCAM1-201ENST00000294728 TRAV13-2A0A0B4J235 113 aa4.41□□□□□ -1.7
VCAM1-201ENST00000294728 PRSS2P07478 247 aa4.41□□□□□ -1.7
VCAM1-201ENST00000294728 LINC00643Q86TS7 51 aa4.41□□□□□ -1.7
VCAM1-201ENST00000294728 CDC42SE2Q9NRR3 84 aa4.41□□□□□ -1.7
VCAM1-201ENST00000294728 KNCNA6PVL3 124 aa4.4□□□□□ -1.7
VCAM1-201ENST00000294728 INAFM2P0DMQ5 153 aa4.4□□□□□ -1.7
VCAM1-201ENST00000294728 RPL36AP83881 106 aaKnown RBP4.4□□□□□ -1.7
VCAM1-201ENST00000294728 RPL36ALQ969Q0 106 aaKnown RBP4.4□□□□□ -1.7
VCAM1-201ENST00000294728 IGHV3-64A0A075B6Q5 118 aa4.4□□□□□ -1.71
VCAM1-201ENST00000294728 K7EQD1 137 aa4.4□□□□□ -1.71
VCAM1-201ENST00000294728 IGKV3-20P01619 116 aa4.4□□□□□ -1.71
VCAM1-201ENST00000294728 PROK1P58294 105 aa4.4□□□□□ -1.71
VCAM1-201ENST00000294728 C10orf99Q6UWK7 81 aa4.4□□□□□ -1.71
VCAM1-201ENST00000294728 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.4□□□□□ -1.71
VCAM1-201ENST00000294728 OBSCN-AS1Q96MR7 158 aa4.4□□□□□ -1.71
VCAM1-201ENST00000294728 TMEM126AQ9H061 195 aa4.4□□□□□ -1.71
VCAM1-201ENST00000294728 LINC00694P0DN24 101 aa4.4□□□□□ -1.71
VCAM1-201ENST00000294728 HIST2H2BDQ6DRA6 164 aa4.4□□□□□ -1.71
VCAM1-201ENST00000294728 LINC01587Q99440 93 aa4.4□□□□□ -1.71
VCAM1-201ENST00000294728 NBEAL1Q6ZS30 2694 aa4.39□□□□□ -1.71
VCAM1-201ENST00000294728 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.39□□□□□ -1.71
VCAM1-201ENST00000294728 TRBV6-4A0A1B0GX49 114 aa4.39□□□□□ -1.71
VCAM1-201ENST00000294728 IGKV2-29A2NJV5 120 aaPredicted RBP4.39□□□□□ -1.71
VCAM1-201ENST00000294728 CEMP1Q6PRD7 247 aaPredicted RBP4.39□□□□□ -1.71
VCAM1-201ENST00000294728 Q9H8V8 135 aa4.39□□□□□ -1.71
VCAM1-201ENST00000294728 A0A1W2PRX2 142 aa4.39□□□□□ -1.71
VCAM1-201ENST00000294728 COX6A2Q02221 97 aa4.39□□□□□ -1.71
VCAM1-201ENST00000294728 DGAT2L7PQ6IED9 249 aa4.39□□□□□ -1.71
VCAM1-201ENST00000294728 C5orf38Q86SI9 138 aa4.39□□□□□ -1.71
VCAM1-201ENST00000294728 C1orf158Q8N1D5 194 aa4.39□□□□□ -1.71
VCAM1-201ENST00000294728 A0A1B0GX51 115 aa4.38□□□□□ -1.71
VCAM1-201ENST00000294728 H0YGX0 51 aa4.38□□□□□ -1.71
VCAM1-201ENST00000294728 H7C2G1 150 aa4.38□□□□□ -1.71
VCAM1-201ENST00000294728 SLURP1P55000 103 aa4.38□□□□□ -1.71
VCAM1-201ENST00000294728 ADARB2-AS1A8MUL3 147 aa4.38□□□□□ -1.71
VCAM1-201ENST00000294728 CLEC2BQ92478 149 aa4.38□□□□□ -1.71
VCAM1-201ENST00000294728 C22orf24Q9Y442 160 aa4.38□□□□□ -1.71
VCAM1-201ENST00000294728 IBA57-AS1B1ANH7 110 aa4.37□□□□□ -1.71
VCAM1-201ENST00000294728 TGFAP01135 160 aa4.37□□□□□ -1.71
VCAM1-201ENST00000294728 HIST1H4AP62805 103 aaKnown RBP4.37□□□□□ -1.71
VCAM1-201ENST00000294728 ODF3L2Q3SX64 289 aa4.37□□□□□ -1.71
VCAM1-201ENST00000294728 SOSTDC1Q6X4U4 206 aa4.37□□□□□ -1.71
VCAM1-201ENST00000294728 NTM-AS1Q6ZSK4 140 aa4.37□□□□□ -1.71
VCAM1-201ENST00000294728 C16orf74Q96GX8 76 aa4.37□□□□□ -1.71
VCAM1-201ENST00000294728 MEGF8Q7Z7M0 2845 aa4.37□□□□□ -1.71
VCAM1-201ENST00000294728 MEIG1Q5JSS6 88 aa4.37□□□□□ -1.71
VCAM1-201ENST00000294728 DYNLRB2Q8TF09 96 aa4.37□□□□□ -1.71
VCAM1-201ENST00000294728 SONP18583 2426 aaKnown RBP4.37□□□□□ -1.71
VCAM1-201ENST00000294728 IGHV3-73A0A0B4J1V6 119 aa4.37□□□□□ -1.71
VCAM1-201ENST00000294728 LINC00167Q96N53 147 aa4.37□□□□□ -1.71
VCAM1-201ENST00000294728 TMEM243Q9BU79 118 aa4.37□□□□□ -1.71
VCAM1-201ENST00000294728 Q9UF83 564 aa4.37□□□□□ -1.71
VCAM1-201ENST00000294728 C11orf44Q8N8P7 122 aa4.36□□□□□ -1.71
VCAM1-201ENST00000294728 MUC7Q8TAX7 377 aa4.36□□□□□ -1.71
VCAM1-201ENST00000294728 TLN2Q9Y4G6 2542 aa4.36□□□□□ -1.71
VCAM1-201ENST00000294728 STHQ8IWL8 128 aa4.36□□□□□ -1.71
VCAM1-201ENST00000294728 DEFB104AQ8WTQ1 72 aa4.36□□□□□ -1.71
VCAM1-201ENST00000294728 A0A087WZ39 114 aa4.35□□□□□ -1.71
VCAM1-201ENST00000294728 PLAC8L1A1L4L8 177 aa4.35□□□□□ -1.71
VCAM1-201ENST00000294728 A8MZ25 164 aa4.35□□□□□ -1.71
VCAM1-201ENST00000294728 BAALC-AS2P0C853 105 aa4.35□□□□□ -1.71
VCAM1-201ENST00000294728 LINC00612Q8N6U2 182 aa4.35□□□□□ -1.71
VCAM1-201ENST00000294728 COX7B2Q8TF08 81 aa4.35□□□□□ -1.71
VCAM1-201ENST00000294728 C16orf95Q9H693 158 aa4.35□□□□□ -1.71
VCAM1-201ENST00000294728 RNASE13Q5GAN3 156 aaKnown RBP4.35□□□□□ -1.71
VCAM1-201ENST00000294728 IGHV3OR16-9A0A0B4J2B5 98 aa4.35□□□□□ -1.71
VCAM1-201ENST00000294728 B5MCH6 92 aa4.35□□□□□ -1.71
VCAM1-201ENST00000294728 MALP21145 153 aa4.35□□□□□ -1.71
VCAM1-201ENST00000294728 Q6ZSV7 163 aa4.35□□□□□ -1.71
VCAM1-201ENST00000294728 A0A1B0GUV1 79 aa4.34□□□□□ -1.71
VCAM1-201ENST00000294728 CCDC179H3BU77 68 aa4.34□□□□□ -1.71
VCAM1-201ENST00000294728 UQCRQO14949 82 aa4.34□□□□□ -1.71
VCAM1-201ENST00000294728 CRPP02741 224 aa4.34□□□□□ -1.71
VCAM1-201ENST00000294728 CSNK1G2-AS1Q8NCQ2 148 aa4.34□□□□□ -1.71
VCAM1-201ENST00000294728 IGKV2-28A0A075B6P5 120 aa4.34□□□□□ -1.72
VCAM1-201ENST00000294728 IGHV3-38A0A0C4DH36 116 aa4.34□□□□□ -1.72
VCAM1-201ENST00000294728 IGKV2D-28P01615 120 aa4.34□□□□□ -1.72
VCAM1-201ENST00000294728 KIR2DL5BQ8NHK3 375 aa4.34□□□□□ -1.72
VCAM1-201ENST00000294728 LINC00526Q96FQ7 95 aa4.34□□□□□ -1.72
VCAM1-201ENST00000294728 TRGV1A0A0A0MS02 117 aa4.33□□□□□ -1.72
VCAM1-201ENST00000294728 UBE2L6O14933 153 aa4.33□□□□□ -1.72
VCAM1-201ENST00000294728 NDUFC2O95298 119 aa4.33□□□□□ -1.72
VCAM1-201ENST00000294728 GIG44P09565 113 aaPredicted RBP4.33□□□□□ -1.72
VCAM1-201ENST00000294728 COX17Q14061 63 aa4.33□□□□□ -1.72
VCAM1-201ENST00000294728 Q6JHZ5 121 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms