RNA–Protein interactions for RNA: ENST00000288986.6

NCK1-201, Transcript of NCK adaptor protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCK1, Length 1,937 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-201ENST00000288986 TINCRA0A1B0GVN0 87 aa10.42□□□□□ -0.74
NCK1-201ENST00000288986 DLEU1O43261 78 aa10.42□□□□□ -0.74
NCK1-201ENST00000288986 ZNF22P17026 224 aaPredicted RBP10.42□□□□□ -0.74
NCK1-201ENST00000288986 SLC25A34Q6PIV7 304 aa10.42□□□□□ -0.74
NCK1-201ENST00000288986 BOD1L2Q8IYS8 172 aa10.42□□□□□ -0.74
NCK1-201ENST00000288986 TMEM101Q96IK0 257 aa10.42□□□□□ -0.74
NCK1-201ENST00000288986 KRTAP1-5Q9BYS1 174 aa10.42□□□□□ -0.74
NCK1-201ENST00000288986 DNAH6Q9C0G6 4158 aa10.42□□□□□ -0.74
NCK1-201ENST00000288986 E9PLD3 99 aa10.41□□□□□ -0.74
NCK1-201ENST00000288986 Q8N3U1 123 aa10.41□□□□□ -0.74
NCK1-201ENST00000288986 IGLV4-60A0A075B6I1 120 aa10.41□□□□□ -0.74
NCK1-201ENST00000288986 K7EP13 123 aa10.4□□□□□ -0.74
NCK1-201ENST00000288986 TP73-AS1Q9UF72 201 aa10.4□□□□□ -0.74
NCK1-201ENST00000288986 IGLV5-45A0A087WSX0 123 aa10.39□□□□□ -0.75
NCK1-201ENST00000288986 TMEM223A0PJW6 202 aa10.39□□□□□ -0.75
NCK1-201ENST00000288986 NMUP48645 174 aa10.39□□□□□ -0.75
NCK1-201ENST00000288986 PCP2Q8IVA1 136 aa10.39□□□□□ -0.75
NCK1-201ENST00000288986 C10orf126Q8N4M7 172 aa10.39□□□□□ -0.75
NCK1-201ENST00000288986 DNAH2Q9P225 4427 aa10.39□□□□□ -0.75
NCK1-201ENST00000288986 TMEM170BQ5T4T1 132 aa10.39□□□□□ -0.75
NCK1-201ENST00000288986 C1orf134Q5TEV5 83 aa10.39□□□□□ -0.75
NCK1-201ENST00000288986 HNRNPA3P51991 378 aaKnown RBP10.38□□□□□ -0.75
NCK1-201ENST00000288986 RBX1P62877 108 aa10.38□□□□□ -0.75
NCK1-201ENST00000288986 MPV17L2Q567V2 206 aa10.38□□□□□ -0.75
NCK1-201ENST00000288986 LINC00242Q5T6M2 205 aa10.38□□□□□ -0.75
NCK1-201ENST00000288986 HERVK_113P61574 105 aa10.37□□□□□ -0.75
NCK1-201ENST00000288986 SEC11AP67812 179 aa10.37□□□□□ -0.75
NCK1-201ENST00000288986 C6orf223Q8N319 242 aa10.37□□□□□ -0.75
NCK1-201ENST00000288986 C2orf91Q6ZV80 131 aa10.37□□□□□ -0.75
NCK1-201ENST00000288986 HERVK_113P63121 156 aa10.36□□□□□ -0.75
NCK1-201ENST00000288986 TTTY13Q9BZ97 58 aa10.36□□□□□ -0.75
NCK1-201ENST00000288986 IBA57-AS1B1ANH7 110 aa10.35□□□□□ -0.75
NCK1-201ENST00000288986 COX6A2Q02221 97 aa10.35□□□□□ -0.75
NCK1-201ENST00000288986 KLK12Q9UKR0 248 aa10.35□□□□□ -0.75
NCK1-201ENST00000288986 TRAV13-1A0A0B4J241 112 aa10.35□□□□□ -0.75
NCK1-201ENST00000288986 ANGP03950 147 aaKnown RBP10.35□□□□□ -0.75
NCK1-201ENST00000288986 CTAG1AP78358 180 aa10.35□□□□□ -0.75
NCK1-201ENST00000288986 MAPKAPK5-AS1Q8N8E1 139 aa10.35□□□□□ -0.75
NCK1-201ENST00000288986 GEMIN7Q9H840 131 aaKnown RBP10.35□□□□□ -0.75
NCK1-201ENST00000288986 Q9HAA7 133 aa10.34□□□□□ -0.75
NCK1-201ENST00000288986 CDKN2A-AS1Q9UH64 79 aa10.34□□□□□ -0.75
NCK1-201ENST00000288986 LEPROTO15243 131 aa10.33□□□□□ -0.76
NCK1-201ENST00000288986 TSPEAR-AS2P59090 65 aa10.33□□□□□ -0.76
NCK1-201ENST00000288986 LINC00469Q8N7U9 141 aa10.33□□□□□ -0.76
NCK1-201ENST00000288986 DNAH10Q8IVF4 4471 aa10.32□□□□□ -0.76
NCK1-201ENST00000288986 FRAS1Q86XX4 4008 aa10.32□□□□□ -0.76
NCK1-201ENST00000288986 RTL8CO15255 209 aa10.32□□□□□ -0.76
NCK1-201ENST00000288986 UBE2WQ96B02 151 aa10.32□□□□□ -0.76
NCK1-201ENST00000288986 HIGD1BQ9P298 99 aa10.32□□□□□ -0.76
NCK1-201ENST00000288986 IGHV1-58A0A0C4DH39 117 aa10.31□□□□□ -0.76
NCK1-201ENST00000288986 MYMXA0A1B0GTQ4 84 aa10.31□□□□□ -0.76
NCK1-201ENST00000288986 LINC00959A0A1B0GUT2 108 aa10.31□□□□□ -0.76
NCK1-201ENST00000288986 TRAV8-3A0A0A6YYJ7 113 aa10.31□□□□□ -0.76
NCK1-201ENST00000288986 H3BRM9 83 aa10.31□□□□□ -0.76
NCK1-201ENST00000288986 J3QQQ9 107 aa10.31□□□□□ -0.76
NCK1-201ENST00000288986 CCL25O15444 150 aa10.31□□□□□ -0.76
NCK1-201ENST00000288986 LINC00269Q8N2A0 174 aa10.31□□□□□ -0.76
NCK1-201ENST00000288986 PLEKHB2Q96CS7 222 aa10.31□□□□□ -0.76
NCK1-201ENST00000288986 SNHG12Q9BXW3 62 aa10.31□□□□□ -0.76
NCK1-201ENST00000288986 CRPP02741 224 aa10.3□□□□□ -0.76
NCK1-201ENST00000288986 IGHV3OR16-9A0A0B4J2B5 98 aa10.29□□□□□ -0.76
NCK1-201ENST00000288986 IGLV5-39A0A0G2JS06 123 aa10.29□□□□□ -0.76
NCK1-201ENST00000288986 CLPSL2Q6UWE3 100 aa10.29□□□□□ -0.76
NCK1-201ENST00000288986 M0R143 59 aa10.29□□□□□ -0.76
NCK1-201ENST00000288986 PRR34Q9NV39 138 aa10.29□□□□□ -0.76
NCK1-201ENST00000288986 ZNF815PA8K554 130 aa10.28□□□□□ -0.76
NCK1-201ENST00000288986 SMIM1B2RUZ4 78 aa10.28□□□□□ -0.76
NCK1-201ENST00000288986 EREGO14944 169 aa10.28□□□□□ -0.76
NCK1-201ENST00000288986 SPINK8P0C7L1 97 aa10.28□□□□□ -0.76
NCK1-201ENST00000288986 ENHOQ6UWT2 76 aa10.28□□□□□ -0.76
NCK1-201ENST00000288986 LINC00336Q6ZUF6 198 aa10.28□□□□□ -0.76
NCK1-201ENST00000288986 IGHV3-64A0A075B6Q5 118 aa10.27□□□□□ -0.76
NCK1-201ENST00000288986 PSCAO43653 123 aa10.27□□□□□ -0.76
NCK1-201ENST00000288986 LGALS3P17931 250 aaKnown RBP10.27□□□□□ -0.76
NCK1-201ENST00000288986 REG3AQ06141 175 aa10.27□□□□□ -0.76
NCK1-201ENST00000288986 Q6ZRN7 208 aaPredicted RBP10.27□□□□□ -0.76
NCK1-201ENST00000288986 IGKV3OR2-268A0A0C4DH90 116 aa10.27□□□□□ -0.77
NCK1-201ENST00000288986 SS18Q15532 418 aa10.27□□□□□ -0.77
NCK1-201ENST00000288986 IGKV2D-24A0A075B6R9 120 aa10.26□□□□□ -0.77
NCK1-201ENST00000288986 A0A087WZ39 114 aa10.25□□□□□ -0.77
NCK1-201ENST00000288986 TNP2Q05952 138 aa10.25□□□□□ -0.77
NCK1-201ENST00000288986 RMI2Q96E14 147 aa10.25□□□□□ -0.77
NCK1-201ENST00000288986 TM2D2Q9BX73 214 aa10.25□□□□□ -0.77
NCK1-201ENST00000288986 FAT2Q9NYQ8 4349 aa10.25□□□□□ -0.77
NCK1-201ENST00000288986 DNAH17Q9UFH2 4485 aa10.25□□□□□ -0.77
NCK1-201ENST00000288986 HSD52Q0P140 79 aa10.25□□□□□ -0.77
NCK1-201ENST00000288986 MIAQ16674 131 aa10.25□□□□□ -0.77
NCK1-201ENST00000288986 LBHQ53QV2 105 aaPredicted RBP10.25□□□□□ -0.77
NCK1-201ENST00000288986 BVES-AS1Q5T3Y7 98 aa10.24□□□□□ -0.77
NCK1-201ENST00000288986 LINC01561Q8N1V8 128 aa10.24□□□□□ -0.77
NCK1-201ENST00000288986 C1orf43Q9BWL3 253 aa10.24□□□□□ -0.77
NCK1-201ENST00000288986 COX11Q9Y6N1 276 aa10.24□□□□□ -0.77
NCK1-201ENST00000288986 IGLV10-54A0A075B6I4 117 aa10.23□□□□□ -0.77
NCK1-201ENST00000288986 HINT1P49773 126 aaPredicted RBP10.23□□□□□ -0.77
NCK1-201ENST00000288986 TAL2Q16559 108 aa10.23□□□□□ -0.77
NCK1-201ENST00000288986 CD164L2Q6UWJ8 174 aa10.23□□□□□ -0.77
NCK1-201ENST00000288986 CHCHD10Q8WYQ3 142 aaPredicted RBP10.22□□□□□ -0.77
NCK1-201ENST00000288986 NDUFA12Q9UI09 145 aa10.21□□□□□ -0.77
NCK1-201ENST00000288986 TRAV8-4A0A0B4J246 113 aa10.21□□□□□ -0.78
NCK1-201ENST00000288986 NDUFA1O15239 70 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms