RNA–Protein interactions for RNA: ENST00000287263.8

RAB11FIP1-201, Transcript of RAB11 family interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB11FIP1, Length 6,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP1-201ENST00000287263 A0A087WYN8 130 aa10.62□□□□□ -0.71
RAB11FIP1-201ENST00000287263 KRTAP10-9P60411 292 aa10.62□□□□□ -0.71
RAB11FIP1-201ENST00000287263 KPRPQ5T749 579 aaPredicted RBP10.62□□□□□ -0.71
RAB11FIP1-201ENST00000287263 CDIP1Q9H305 208 aa10.62□□□□□ -0.71
RAB11FIP1-201ENST00000287263 UBE2D3P61077 147 aa10.61□□□□□ -0.71
RAB11FIP1-201ENST00000287263 PTPN13Q12923 2485 aa10.61□□□□□ -0.71
RAB11FIP1-201ENST00000287263 Q6ZPA2 131 aa10.61□□□□□ -0.71
RAB11FIP1-201ENST00000287263 RETNLBQ9BQ08 111 aa10.61□□□□□ -0.71
RAB11FIP1-201ENST00000287263 BRWD1-AS2P59051 145 aa10.61□□□□□ -0.71
RAB11FIP1-201ENST00000287263 CUL9Q8IWT3 2517 aa10.61□□□□□ -0.71
RAB11FIP1-201ENST00000287263 VPREB1P12018 145 aa10.61□□□□□ -0.71
RAB11FIP1-201ENST00000287263 Q8N3U1 123 aa10.61□□□□□ -0.71
RAB11FIP1-201ENST00000287263 Q6ZSR3 168 aa10.6□□□□□ -0.71
RAB11FIP1-201ENST00000287263 BRI3O95415 125 aa10.6□□□□□ -0.71
RAB11FIP1-201ENST00000287263 TRBV6-8A0A0A6YYG3 113 aa10.6□□□□□ -0.71
RAB11FIP1-201ENST00000287263 TRAV10A0A0B4J240 114 aa10.6□□□□□ -0.71
RAB11FIP1-201ENST00000287263 M0QY20 66 aa10.6□□□□□ -0.71
RAB11FIP1-201ENST00000287263 NRACQ8N912 160 aa10.6□□□□□ -0.71
RAB11FIP1-201ENST00000287263 MED12LQ86YW9 2145 aa10.59□□□□□ -0.71
RAB11FIP1-201ENST00000287263 ZNF73O43830 326 aaPredicted RBP10.59□□□□□ -0.71
RAB11FIP1-201ENST00000287263 PYGO1Q9Y3Y4 419 aa10.59□□□□□ -0.71
RAB11FIP1-201ENST00000287263 LY6LH3BQJ8 138 aa10.59□□□□□ -0.71
RAB11FIP1-201ENST00000287263 DSCAMO60469 2012 aa10.58□□□□□ -0.72
RAB11FIP1-201ENST00000287263 NOTCH2Q04721 2471 aa10.58□□□□□ -0.72
RAB11FIP1-201ENST00000287263 SYCNQ0VAF6 134 aa10.58□□□□□ -0.72
RAB11FIP1-201ENST00000287263 URB1-AS1Q96HZ7 61 aa10.58□□□□□ -0.72
RAB11FIP1-201ENST00000287263 KIAA1549LQ6ZVL6 1849 aa10.58□□□□□ -0.72
RAB11FIP1-201ENST00000287263 P0C879 139 aa10.57□□□□□ -0.72
RAB11FIP1-201ENST00000287263 SPINK1P00995 79 aa10.57□□□□□ -0.72
RAB11FIP1-201ENST00000287263 TSHBP01222 138 aa10.57□□□□□ -0.72
RAB11FIP1-201ENST00000287263 DEFB116Q30KQ4 102 aa10.57□□□□□ -0.72
RAB11FIP1-201ENST00000287263 NTM-AS1Q6ZSK4 140 aa10.57□□□□□ -0.72
RAB11FIP1-201ENST00000287263 PRR14LQ5THK1 2151 aa10.57□□□□□ -0.72
RAB11FIP1-201ENST00000287263 C11orf71Q6IPW1 123 aa10.56□□□□□ -0.72
RAB11FIP1-201ENST00000287263 NUP210LQ5VU65 1888 aa10.56□□□□□ -0.72
RAB11FIP1-201ENST00000287263 IGLV2-11P01706 119 aa10.55□□□□□ -0.72
RAB11FIP1-201ENST00000287263 COL4A4P53420 1690 aaPredicted RBP10.55□□□□□ -0.72
RAB11FIP1-201ENST00000287263 PRR3P79522 188 aaKnown RBP10.55□□□□□ -0.72
RAB11FIP1-201ENST00000287263 TSPEAR-AS2P59090 65 aa10.54□□□□□ -0.72
RAB11FIP1-201ENST00000287263 ESRGQ1W209 222 aa10.54□□□□□ -0.72
RAB11FIP1-201ENST00000287263 CSPG4Q6UVK1 2322 aa10.54□□□□□ -0.72
RAB11FIP1-201ENST00000287263 LINC01547P58512 204 aaPredicted RBP10.54□□□□□ -0.72
RAB11FIP1-201ENST00000287263 SPG11Q96JI7 2443 aa10.54□□□□□ -0.72
RAB11FIP1-201ENST00000287263 PRR9Q5T870 116 aa10.54□□□□□ -0.72
RAB11FIP1-201ENST00000287263 TMEM254Q8TBM7 123 aa10.54□□□□□ -0.72
RAB11FIP1-201ENST00000287263 Q8N6K4 173 aa10.53□□□□□ -0.72
RAB11FIP1-201ENST00000287263 PLAC8L1A1L4L8 177 aa10.53□□□□□ -0.72
RAB11FIP1-201ENST00000287263 AVPP01185 164 aa10.53□□□□□ -0.72
RAB11FIP1-201ENST00000287263 UBE2D2P62837 147 aa10.53□□□□□ -0.72
RAB11FIP1-201ENST00000287263 X6R8D5 127 aa10.52□□□□□ -0.72
RAB11FIP1-201ENST00000287263 ZNF580Q9UK33 172 aa10.52□□□□□ -0.73
RAB11FIP1-201ENST00000287263 LINC00846Q9NV44 126 aa10.51□□□□□ -0.73
RAB11FIP1-201ENST00000287263 C11orf21Q9P2W6 132 aa10.51□□□□□ -0.73
RAB11FIP1-201ENST00000287263 RNASE3P12724 160 aaKnown RBP10.5□□□□□ -0.73
RAB11FIP1-201ENST00000287263 Q6ZVQ6 151 aa10.5□□□□□ -0.73
RAB11FIP1-201ENST00000287263 SONP18583 2426 aaKnown RBP10.5□□□□□ -0.73
RAB11FIP1-201ENST00000287263 ADAMTSL4-AS1Q5T5F5 129 aa10.5□□□□□ -0.73
RAB11FIP1-201ENST00000287263 HIVEP3Q5T1R4 2406 aa10.49□□□□□ -0.73
RAB11FIP1-201ENST00000287263 SORL1Q92673 2214 aa10.49□□□□□ -0.73
RAB11FIP1-201ENST00000287263 Q8N814 137 aa10.49□□□□□ -0.73
RAB11FIP1-201ENST00000287263 PCNX3Q9H6A9 2034 aa10.49□□□□□ -0.73
RAB11FIP1-201ENST00000287263 PSMG3-AS1Q96PY0 264 aa10.49□□□□□ -0.73
RAB11FIP1-201ENST00000287263 CIRBP-AS1Q8TBR5 109 aa10.49□□□□□ -0.73
RAB11FIP1-201ENST00000287263 ALPK3Q96L96 1907 aa10.49□□□□□ -0.73
RAB11FIP1-201ENST00000287263 C9orf116Q5BN46 136 aaPredicted RBP10.47□□□□□ -0.73
RAB11FIP1-201ENST00000287263 H0Y9P7 68 aa10.47□□□□□ -0.73
RAB11FIP1-201ENST00000287263 TRBV6-4A0A1B0GX49 114 aa10.47□□□□□ -0.73
RAB11FIP1-201ENST00000287263 ODF3Q96PU9 254 aa10.47□□□□□ -0.73
RAB11FIP1-201ENST00000287263 IGLV4-69A0A075B6H9 119 aa10.46□□□□□ -0.73
RAB11FIP1-201ENST00000287263 LINC00575Q6W349 94 aa10.46□□□□□ -0.74
RAB11FIP1-201ENST00000287263 CRIP3Q6Q6R5 217 aa10.46□□□□□ -0.74
RAB11FIP1-201ENST00000287263 LINC00959A0A1B0GUT2 108 aa10.45□□□□□ -0.74
RAB11FIP1-201ENST00000287263 SPAG11AQ6PDA7 123 aa10.45□□□□□ -0.74
RAB11FIP1-201ENST00000287263 CEP192Q8TEP8 1941 aa10.45□□□□□ -0.74
RAB11FIP1-201ENST00000287263 NUPR2A6NF83 97 aa10.45□□□□□ -0.74
RAB11FIP1-201ENST00000287263 ARHGAP32A7KAX9 2087 aa10.45□□□□□ -0.74
RAB11FIP1-201ENST00000287263 PRRC2AP48634 2157 aaKnown RBP10.45□□□□□ -0.74
RAB11FIP1-201ENST00000287263 M0R378 163 aa10.45□□□□□ -0.74
RAB11FIP1-201ENST00000287263 PLXNB1O43157 2135 aa10.45□□□□□ -0.74
RAB11FIP1-201ENST00000287263 COX6A2Q02221 97 aa10.44□□□□□ -0.74
RAB11FIP1-201ENST00000287263 LTBP2Q14767 1821 aa10.44□□□□□ -0.74
RAB11FIP1-201ENST00000287263 IGHV6-1A0A0B4J1U7 121 aa10.44□□□□□ -0.74
RAB11FIP1-201ENST00000287263 DHRS4-AS1Q9P1J3 65 aa10.43□□□□□ -0.74
RAB11FIP1-201ENST00000287263 HCFC1P51610 2035 aa10.43□□□□□ -0.74
RAB11FIP1-201ENST00000287263 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.43□□□□□ -0.74
RAB11FIP1-201ENST00000287263 MDFIQ99750 246 aa10.43□□□□□ -0.74
RAB11FIP1-201ENST00000287263 IGLV5-52A0A0A0MRZ9 124 aa10.42□□□□□ -0.74
RAB11FIP1-201ENST00000287263 A8MTW9 85 aa10.42□□□□□ -0.74
RAB11FIP1-201ENST00000287263 LELP1Q5T871 98 aa10.42□□□□□ -0.74
RAB11FIP1-201ENST00000287263 LINC00574Q9H8X3 128 aa10.42□□□□□ -0.74
RAB11FIP1-201ENST00000287263 IGIPA6NJ69 53 aa10.42□□□□□ -0.74
RAB11FIP1-201ENST00000287263 CD164L2Q6UWJ8 174 aa10.42□□□□□ -0.74
RAB11FIP1-201ENST00000287263 C1orf137Q5JT78 98 aa10.41□□□□□ -0.74
RAB11FIP1-201ENST00000287263 EIF4EBP1Q13541 118 aaPredicted RBP10.41□□□□□ -0.74
RAB11FIP1-201ENST00000287263 PRO3102Q9H379 93 aa10.41□□□□□ -0.74
RAB11FIP1-201ENST00000287263 TTC28Q96AY4 2481 aa10.41□□□□□ -0.74
RAB11FIP1-201ENST00000287263 Q6ZTC4 211 aa10.4□□□□□ -0.74
RAB11FIP1-201ENST00000287263 POLR2KP53803 58 aaKnown RBP10.4□□□□□ -0.74
RAB11FIP1-201ENST00000287263 C6orf223Q8N319 242 aa10.4□□□□□ -0.74
RAB11FIP1-201ENST00000287263 RPL28P46779 137 aaKnown RBP10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms