RNA–Protein interactions for RNA: ENST00000278412.6

SSRP1-201, Transcript of structure specific recognition protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSRP1, Length 2,819 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-201ENST00000278412 B5MCH6 92 aa8.12□□□□□ -1.11
SSRP1-201ENST00000278412 K7EMI3 77 aa8.12□□□□□ -1.11
SSRP1-201ENST00000278412 APOMO95445 188 aa8.12□□□□□ -1.11
SSRP1-201ENST00000278412 XGP55808 180 aa8.12□□□□□ -1.11
SSRP1-201ENST00000278412 IGLV4-60A0A075B6I1 120 aa8.11□□□□□ -1.11
SSRP1-201ENST00000278412 IGKV3OR2-268A0A0C4DH90 116 aa8.11□□□□□ -1.11
SSRP1-201ENST00000278412 A0A0J9YXV3 536 aa8.11□□□□□ -1.11
SSRP1-201ENST00000278412 NMUP48645 174 aa8.11□□□□□ -1.11
SSRP1-201ENST00000278412 DAZ4Q86SG3 579 aaKnown RBP8.11□□□□□ -1.11
SSRP1-201ENST00000278412 CHAC1Q9BUX1 264 aa8.11□□□□□ -1.11
SSRP1-201ENST00000278412 DAZ3Q9NR90 486 aaKnown RBP8.11□□□□□ -1.11
SSRP1-201ENST00000278412 IGHV3-64A0A075B6Q5 118 aa8.11□□□□□ -1.11
SSRP1-201ENST00000278412 CEND1Q8N111 149 aa8.11□□□□□ -1.11
SSRP1-201ENST00000278412 NHP2Q9NX24 153 aaKnown RBP8.11□□□□□ -1.11
SSRP1-201ENST00000278412 IGKCP01834 107 aa8.1□□□□□ -1.11
SSRP1-201ENST00000278412 CLPSL2Q6UWE3 100 aa8.1□□□□□ -1.11
SSRP1-201ENST00000278412 C11orf45Q8TAV5 145 aa8.1□□□□□ -1.11
SSRP1-201ENST00000278412 TIMM17AQ99595 171 aa8.1□□□□□ -1.11
SSRP1-201ENST00000278412 TRBV6-8A0A0A6YYG3 113 aa8.1□□□□□ -1.11
SSRP1-201ENST00000278412 A0A1B0GWB2 263 aa8.1□□□□□ -1.11
SSRP1-201ENST00000278412 SMIM20Q8N5G0 67 aa8.1□□□□□ -1.11
SSRP1-201ENST00000278412 CHCHD5Q9BSY4 110 aa8.1□□□□□ -1.11
SSRP1-201ENST00000278412 STARD9Q9P2P6 4700 aa8.09□□□□□ -1.11
SSRP1-201ENST00000278412 F8VRH5 84 aa8.09□□□□□ -1.11
SSRP1-201ENST00000278412 DPM2O94777 84 aa8.09□□□□□ -1.11
SSRP1-201ENST00000278412 NHLRC4P0CG21 123 aaPredicted RBP8.09□□□□□ -1.11
SSRP1-201ENST00000278412 PMVKQ15126 192 aa8.09□□□□□ -1.11
SSRP1-201ENST00000278412 TMEM141Q96I45 108 aa8.08□□□□□ -1.12
SSRP1-201ENST00000278412 TMEM243Q9BU79 118 aa8.08□□□□□ -1.12
SSRP1-201ENST00000278412 C11orf68Q9H3H3 251 aaKnown RBP8.08□□□□□ -1.12
SSRP1-201ENST00000278412 TRAV13-1A0A0B4J241 112 aa8.08□□□□□ -1.12
SSRP1-201ENST00000278412 COX6A2Q02221 97 aa8.08□□□□□ -1.12
SSRP1-201ENST00000278412 ZFAND6Q6FIF0 208 aa8.08□□□□□ -1.12
SSRP1-201ENST00000278412 VCX2Q9H322 139 aa8.08□□□□□ -1.12
SSRP1-201ENST00000278412 PLECQ15149 4684 aaKnown RBP8.08□□□□□ -1.12
SSRP1-201ENST00000278412 TRAV12-1A0A0B4J245 112 aa8.07□□□□□ -1.12
SSRP1-201ENST00000278412 TAL2Q16559 108 aa8.07□□□□□ -1.12
SSRP1-201ENST00000278412 TRBV25-1A0A075B6N4 114 aa8.07□□□□□ -1.12
SSRP1-201ENST00000278412 DEFB131BA0A096LNP1 70 aa8.07□□□□□ -1.12
SSRP1-201ENST00000278412 MAPKAPK5-AS1Q8N8E1 139 aa8.07□□□□□ -1.12
SSRP1-201ENST00000278412 NFE4Q86UQ8 179 aa8.07□□□□□ -1.12
SSRP1-201ENST00000278412 AMELXQ99217 191 aa8.07□□□□□ -1.12
SSRP1-201ENST00000278412 TMEM262E9PQX1 116 aa8.06□□□□□ -1.12
SSRP1-201ENST00000278412 SMCPP49901 116 aaPredicted RBP8.06□□□□□ -1.12
SSRP1-201ENST00000278412 TSPEAR-AS2P59090 65 aa8.06□□□□□ -1.12
SSRP1-201ENST00000278412 TMEM170BQ5T4T1 132 aa8.06□□□□□ -1.12
SSRP1-201ENST00000278412 DGAT2L7PQ6IED9 249 aa8.06□□□□□ -1.12
SSRP1-201ENST00000278412 TRAV8-3A0A0A6YYJ7 113 aa8.05□□□□□ -1.12
SSRP1-201ENST00000278412 UBE2L6O14933 153 aa8.05□□□□□ -1.12
SSRP1-201ENST00000278412 CDC42SE2Q9NRR3 84 aa8.05□□□□□ -1.12
SSRP1-201ENST00000278412 PYGO1Q9Y3Y4 419 aa8.05□□□□□ -1.12
SSRP1-201ENST00000278412 PPDPFLQ8WWR9 84 aa8.04□□□□□ -1.12
SSRP1-201ENST00000278412 SPANXA1Q9NS26 97 aa8.04□□□□□ -1.12
SSRP1-201ENST00000278412 ZNF22P17026 224 aaPredicted RBP8.04□□□□□ -1.12
SSRP1-201ENST00000278412 PLNP26678 52 aa8.03□□□□□ -1.12
SSRP1-201ENST00000278412 CARD19Q96LW7 228 aa8.03□□□□□ -1.12
SSRP1-201ENST00000278412 LYPD5Q6UWN5 251 aa8.03□□□□□ -1.12
SSRP1-201ENST00000278412 WFDC10BQ8IUB3 73 aa8.03□□□□□ -1.12
SSRP1-201ENST00000278412 CDKN2A-AS1Q9UH64 79 aa8.03□□□□□ -1.12
SSRP1-201ENST00000278412 ICOSQ9Y6W8 199 aa8.03□□□□□ -1.12
SSRP1-201ENST00000278412 UBE2D1P51668 147 aa8.02□□□□□ -1.12
SSRP1-201ENST00000278412 LINC00242Q5T6M2 205 aa8.02□□□□□ -1.12
SSRP1-201ENST00000278412 MRPL23Q16540 153 aaKnown RBP8.02□□□□□ -1.13
SSRP1-201ENST00000278412 ESRGQ1W209 222 aa8.02□□□□□ -1.13
SSRP1-201ENST00000278412 DNAH10Q8IVF4 4471 aa8.02□□□□□ -1.13
SSRP1-201ENST00000278412 IGLV10-54A0A075B6I4 117 aa8.02□□□□□ -1.13
SSRP1-201ENST00000278412 CCDC179H3BU77 68 aa8.02□□□□□ -1.13
SSRP1-201ENST00000278412 NDUFV3P56181 108 aaKnown RBP8.02□□□□□ -1.13
SSRP1-201ENST00000278412 B9D2Q9BPU9 175 aa8.02□□□□□ -1.13
SSRP1-201ENST00000278412 TEN1Q86WV5 123 aa8.01□□□□□ -1.13
SSRP1-201ENST00000278412 DNAH1Q9P2D7 4330 aa8.01□□□□□ -1.13
SSRP1-201ENST00000278412 IGHV3-30P01768 117 aa8.01□□□□□ -1.13
SSRP1-201ENST00000278412 IGHV3-33P01772 117 aa8.01□□□□□ -1.13
SSRP1-201ENST00000278412 IGHV3-30-3P0DP02 117 aa8.01□□□□□ -1.13
SSRP1-201ENST00000278412 IGHV3-30-5P0DP03 117 aa8.01□□□□□ -1.13
SSRP1-201ENST00000278412 MRPS36P82909 103 aaKnown RBP8□□□□□ -1.13
SSRP1-201ENST00000278412 LINC00269Q8N2A0 174 aa8□□□□□ -1.13
SSRP1-201ENST00000278412 PLEKHB2Q96CS7 222 aa8□□□□□ -1.13
SSRP1-201ENST00000278412 TIMM21Q9BVV7 248 aa7.99□□□□□ -1.13
SSRP1-201ENST00000278412 Q6Q795 121 aa7.99□□□□□ -1.13
SSRP1-201ENST00000278412 TMEM223A0PJW6 202 aa7.98□□□□□ -1.13
SSRP1-201ENST00000278412 TMEM101Q96IK0 257 aa7.98□□□□□ -1.13
SSRP1-201ENST00000278412 ANGP03950 147 aaKnown RBP7.98□□□□□ -1.13
SSRP1-201ENST00000278412 CSDC2Q9Y534 153 aaKnown RBP7.98□□□□□ -1.13
SSRP1-201ENST00000278412 DYNC2H1Q8NCM8 4307 aaKnown RBP7.98□□□□□ -1.13
SSRP1-201ENST00000278412 XCL1P47992 114 aa7.97□□□□□ -1.13
SSRP1-201ENST00000278412 GAGE2BQ13066 116 aa7.97□□□□□ -1.13
SSRP1-201ENST00000278412 GAGE2EQ4V326 116 aa7.97□□□□□ -1.13
SSRP1-201ENST00000278412 GAGE2DQ9UEU5 116 aa7.97□□□□□ -1.13
SSRP1-201ENST00000278412 KLK12Q9UKR0 248 aa7.97□□□□□ -1.13
SSRP1-201ENST00000278412 LINC01549A6NIU2 74 aa7.97□□□□□ -1.13
SSRP1-201ENST00000278412 IFITM1P13164 125 aa7.97□□□□□ -1.13
SSRP1-201ENST00000278412 C5orf38Q86SI9 138 aa7.97□□□□□ -1.13
SSRP1-201ENST00000278412 HIST1H4GQ99525 98 aa7.97□□□□□ -1.13
SSRP1-201ENST00000278412 TINCRA0A1B0GVN0 87 aa7.96□□□□□ -1.13
SSRP1-201ENST00000278412 LELP1Q5T871 98 aa7.96□□□□□ -1.13
SSRP1-201ENST00000278412 TRAV10A0A0B4J240 114 aa7.96□□□□□ -1.14
SSRP1-201ENST00000278412 PAPPA-AS1Q5QFB9 102 aa7.96□□□□□ -1.14
SSRP1-201ENST00000278412 LINC00959A0A1B0GUT2 108 aa7.95□□□□□ -1.14
SSRP1-201ENST00000278412 TTC32Q5I0X7 151 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 173.4 ms