RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 G3V4G9 280 aa6.65□□□□□ -1.34
TRIM55-201ENST00000276573 FABP2P12104 132 aa6.65□□□□□ -1.34
TRIM55-201ENST00000276573 GTF2H5Q6ZYL4 71 aa6.65□□□□□ -1.34
TRIM55-201ENST00000276573 MUSTN1Q8IVN3 82 aa6.65□□□□□ -1.34
TRIM55-201ENST00000276573 LITAFQ99732 161 aa6.65□□□□□ -1.34
TRIM55-201ENST00000276573 TRRAPQ9Y4A5 3859 aa6.64□□□□□ -1.35
TRIM55-201ENST00000276573 TEX48A0A1B0GUV7 120 aa6.64□□□□□ -1.35
TRIM55-201ENST00000276573 K7EP34 96 aa6.64□□□□□ -1.35
TRIM55-201ENST00000276573 NDUFA1O15239 70 aa6.64□□□□□ -1.35
TRIM55-201ENST00000276573 HTN3P15516 51 aa6.64□□□□□ -1.35
TRIM55-201ENST00000276573 RBX1P62877 108 aa6.64□□□□□ -1.35
TRIM55-201ENST00000276573 RETNQ9HD89 108 aa6.64□□□□□ -1.35
TRIM55-201ENST00000276573 IGKV3OR2-268A0A0C4DH90 116 aa6.64□□□□□ -1.35
TRIM55-201ENST00000276573 CFC1BP0CG36 223 aa6.64□□□□□ -1.35
TRIM55-201ENST00000276573 CFC1P0CG37 223 aa6.64□□□□□ -1.35
TRIM55-201ENST00000276573 MRPL23Q16540 153 aaKnown RBP6.64□□□□□ -1.35
TRIM55-201ENST00000276573 ADAMTSL4-AS1Q5T5F5 129 aa6.64□□□□□ -1.35
TRIM55-201ENST00000276573 LINC00959A0A1B0GUT2 108 aa6.63□□□□□ -1.35
TRIM55-201ENST00000276573 A4D1N5 150 aa6.63□□□□□ -1.35
TRIM55-201ENST00000276573 TIMM17BO60830 172 aa6.63□□□□□ -1.35
TRIM55-201ENST00000276573 APOMO95445 188 aa6.63□□□□□ -1.35
TRIM55-201ENST00000276573 SPANXDQ9BXN6 97 aa6.63□□□□□ -1.35
TRIM55-201ENST00000276573 SPANXCQ9NY87 97 aa6.63□□□□□ -1.35
TRIM55-201ENST00000276573 SPCS1Q9Y6A9 102 aa6.63□□□□□ -1.35
TRIM55-201ENST00000276573 IGHV3OR16-9A0A0B4J2B5 98 aa6.62□□□□□ -1.35
TRIM55-201ENST00000276573 RPL24P83731 157 aaKnown RBP6.62□□□□□ -1.35
TRIM55-201ENST00000276573 PRSS2P07478 247 aa6.62□□□□□ -1.35
TRIM55-201ENST00000276573 SH2D6Q7Z4S9 175 aa6.62□□□□□ -1.35
TRIM55-201ENST00000276573 SVIPQ8NHG7 77 aa6.62□□□□□ -1.35
TRIM55-201ENST00000276573 Q9H8V8 135 aa6.62□□□□□ -1.35
TRIM55-201ENST00000276573 PGPEP1Q9NXJ5 209 aa6.62□□□□□ -1.35
TRIM55-201ENST00000276573 ICOSQ9Y6W8 199 aa6.62□□□□□ -1.35
TRIM55-201ENST00000276573 MIAQ16674 131 aa6.61□□□□□ -1.35
TRIM55-201ENST00000276573 ZNF625Q96I27 306 aaPredicted RBP6.61□□□□□ -1.35
TRIM55-201ENST00000276573 CIRBPQ14011 172 aaKnown RBP6.6□□□□□ -1.35
TRIM55-201ENST00000276573 SS18Q15532 418 aa6.6□□□□□ -1.35
TRIM55-201ENST00000276573 A0A087WZ39 114 aa6.6□□□□□ -1.35
TRIM55-201ENST00000276573 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.6□□□□□ -1.35
TRIM55-201ENST00000276573 EIF4EBP3O60516 100 aaPredicted RBP6.6□□□□□ -1.35
TRIM55-201ENST00000276573 TSPAN13O95857 204 aa6.6□□□□□ -1.35
TRIM55-201ENST00000276573 IFITM1P13164 125 aa6.6□□□□□ -1.35
TRIM55-201ENST00000276573 LELP1Q5T871 98 aa6.6□□□□□ -1.35
TRIM55-201ENST00000276573 C11orf68Q9H3H3 251 aaKnown RBP6.6□□□□□ -1.35
TRIM55-201ENST00000276573 PRO1854Q9UHT4 67 aa6.6□□□□□ -1.35
TRIM55-201ENST00000276573 STAB1Q9NY15 2570 aa6.6□□□□□ -1.35
TRIM55-201ENST00000276573 HERV-K104P63124 156 aa6.59□□□□□ -1.35
TRIM55-201ENST00000276573 C5orf38Q86SI9 138 aa6.59□□□□□ -1.35
TRIM55-201ENST00000276573 COX7B2Q8TF08 81 aa6.59□□□□□ -1.35
TRIM55-201ENST00000276573 A0A0B4J2C4 111 aa6.58□□□□□ -1.36
TRIM55-201ENST00000276573 H3BNG1 76 aa6.58□□□□□ -1.36
TRIM55-201ENST00000276573 LINC00269Q8N2A0 174 aa6.58□□□□□ -1.36
TRIM55-201ENST00000276573 IGHV3-33P01772 117 aa6.58□□□□□ -1.36
TRIM55-201ENST00000276573 LYPD5Q6UWN5 251 aa6.58□□□□□ -1.36
TRIM55-201ENST00000276573 TOMM7Q9P0U1 55 aa6.58□□□□□ -1.36
TRIM55-201ENST00000276573 A0A0J9YWU9 116 aa6.57□□□□□ -1.36
TRIM55-201ENST00000276573 XCL1P47992 114 aa6.57□□□□□ -1.36
TRIM55-201ENST00000276573 NPC2P61916 151 aa6.57□□□□□ -1.36
TRIM55-201ENST00000276573 CLPSL2Q6UWE3 100 aa6.57□□□□□ -1.36
TRIM55-201ENST00000276573 Q6ZTC4 211 aa6.57□□□□□ -1.36
TRIM55-201ENST00000276573 LINC01561Q8N1V8 128 aa6.57□□□□□ -1.36
TRIM55-201ENST00000276573 Q8N3U1 123 aa6.57□□□□□ -1.36
TRIM55-201ENST00000276573 DAND5Q8N907 189 aa6.57□□□□□ -1.36
TRIM55-201ENST00000276573 PKD1L1Q8TDX9 2849 aa6.57□□□□□ -1.36
TRIM55-201ENST00000276573 A0A0U1RRA0 63 aa6.57□□□□□ -1.36
TRIM55-201ENST00000276573 ANGP03950 147 aaKnown RBP6.57□□□□□ -1.36
TRIM55-201ENST00000276573 MEIG1Q5JSS6 88 aa6.57□□□□□ -1.36
TRIM55-201ENST00000276573 KPRPQ5T749 579 aaPredicted RBP6.57□□□□□ -1.36
TRIM55-201ENST00000276573 ERG28Q9UKR5 140 aa6.57□□□□□ -1.36
TRIM55-201ENST00000276573 LOC107984156A0A0G2JMH3 177 aa6.56□□□□□ -1.36
TRIM55-201ENST00000276573 PRB2P02812 416 aaPredicted RBP6.56□□□□□ -1.36
TRIM55-201ENST00000276573 REG3AQ06141 175 aa6.56□□□□□ -1.36
TRIM55-201ENST00000276573 ARL17AQ8IVW1 177 aa6.56□□□□□ -1.36
TRIM55-201ENST00000276573 LINC00308Q8TCZ7 52 aa6.56□□□□□ -1.36
TRIM55-201ENST00000276573 H3BMG7 143 aa6.55□□□□□ -1.36
TRIM55-201ENST00000276573 SFTA2Q6UW10 78 aa6.55□□□□□ -1.36
TRIM55-201ENST00000276573 CD164L2Q6UWJ8 174 aa6.55□□□□□ -1.36
TRIM55-201ENST00000276573 K7EIL1 84 aa6.55□□□□□ -1.36
TRIM55-201ENST00000276573 NANOS2P60321 138 aaKnown RBP6.55□□□□□ -1.36
TRIM55-201ENST00000276573 C11orf45Q8TAV5 145 aa6.55□□□□□ -1.36
TRIM55-201ENST00000276573 CHCHD10Q8WYQ3 142 aaPredicted RBP6.55□□□□□ -1.36
TRIM55-201ENST00000276573 C6orf226Q5I0X4 101 aa6.54□□□□□ -1.36
TRIM55-201ENST00000276573 LYRM7Q5U5X0 104 aa6.54□□□□□ -1.36
TRIM55-201ENST00000276573 SOSTDC1Q6X4U4 206 aa6.54□□□□□ -1.36
TRIM55-201ENST00000276573 COPS9Q8WXC6 57 aa6.54□□□□□ -1.36
TRIM55-201ENST00000276573 DEFB131BA0A096LNP1 70 aa6.53□□□□□ -1.36
TRIM55-201ENST00000276573 F8W1H4 67 aa6.53□□□□□ -1.36
TRIM55-201ENST00000276573 H7C2G1 150 aa6.53□□□□□ -1.36
TRIM55-201ENST00000276573 SCGB1C2P0DMR2 95 aa6.53□□□□□ -1.36
TRIM55-201ENST00000276573 PSMB2P49721 201 aa6.53□□□□□ -1.36
TRIM55-201ENST00000276573 DEFB121Q5J5C9 76 aa6.53□□□□□ -1.36
TRIM55-201ENST00000276573 SPATA25Q9BR10 227 aa6.53□□□□□ -1.36
TRIM55-201ENST00000276573 PPDPFQ9H3Y8 114 aa6.53□□□□□ -1.36
TRIM55-201ENST00000276573 CMYA5Q8N3K9 4069 aa6.53□□□□□ -1.36
TRIM55-201ENST00000276573 COL6A5A8TX70 2615 aa6.53□□□□□ -1.36
TRIM55-201ENST00000276573 IGLV10-54A0A075B6I4 117 aa6.53□□□□□ -1.36
TRIM55-201ENST00000276573 COX7A2LO14548 114 aa6.53□□□□□ -1.36
TRIM55-201ENST00000276573 Q8IZM0 81 aa6.53□□□□□ -1.36
TRIM55-201ENST00000276573 TM2D3Q9BRN9 247 aa6.53□□□□□ -1.36
TRIM55-201ENST00000276573 PRR34Q9NV39 138 aa6.53□□□□□ -1.36
TRIM55-201ENST00000276573 KLK12Q9UKR0 248 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms