RNA–Protein interactions for RNA: ENST00000269571.9

ERBB2-201, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERBB2, Length 4,545 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-201ENST00000269571 IGIPA6NJ69 53 aa8.94□□□□□ -0.98
ERBB2-201ENST00000269571 NDUFC1O43677 76 aa8.94□□□□□ -0.98
ERBB2-201ENST00000269571 TSHBP01222 138 aa8.94□□□□□ -0.98
ERBB2-201ENST00000269571 WDFY4Q6ZS81 3184 aa8.93□□□□□ -0.98
ERBB2-201ENST00000269571 FUSP35637 526 aaKnown RBP eCLIP8.93□□□□□ -0.98
ERBB2-201ENST00000269571 ATP5EP56381 51 aaPredicted RBP8.93□□□□□ -0.98
ERBB2-201ENST00000269571 MRPS36P82909 103 aaKnown RBP8.93□□□□□ -0.98
ERBB2-201ENST00000269571 DEFB135Q30KP9 77 aa8.93□□□□□ -0.98
ERBB2-201ENST00000269571 Q6ZTI0 123 aa8.93□□□□□ -0.98
ERBB2-201ENST00000269571 C16orf74Q96GX8 76 aa8.93□□□□□ -0.98
ERBB2-201ENST00000269571 SBSPONQ8IVN8 264 aa8.93□□□□□ -0.98
ERBB2-201ENST00000269571 F8W735 103 aaPredicted RBP8.92□□□□□ -0.98
ERBB2-201ENST00000269571 TMEM256-PLSCR3K7ERE1 68 aa8.92□□□□□ -0.98
ERBB2-201ENST00000269571 CRYGDP07320 174 aa8.92□□□□□ -0.98
ERBB2-201ENST00000269571 WFDC9Q8NEX5 89 aa8.92□□□□□ -0.98
ERBB2-201ENST00000269571 IGLV4-69A0A075B6H9 119 aa8.92□□□□□ -0.98
ERBB2-201ENST00000269571 IGLV2-18A0A075B6J9 118 aa8.92□□□□□ -0.98
ERBB2-201ENST00000269571 EDN2P20800 178 aa8.92□□□□□ -0.98
ERBB2-201ENST00000269571 EBI3Q14213 229 aa8.91□□□□□ -0.98
ERBB2-201ENST00000269571 K7EQG2 157 aa8.91□□□□□ -0.98
ERBB2-201ENST00000269571 TNFRSF13BO14836 293 aaPredicted RBP8.91□□□□□ -0.98
ERBB2-201ENST00000269571 SOSTDC1Q6X4U4 206 aa8.91□□□□□ -0.98
ERBB2-201ENST00000269571 SCXQ7RTU7 201 aa8.9□□□□□ -0.98
ERBB2-201ENST00000269571 CENPEQ02224 2701 aa8.9□□□□□ -0.98
ERBB2-201ENST00000269571 MAP6D1Q9H9H5 199 aa8.9□□□□□ -0.98
ERBB2-201ENST00000269571 CAMK2N2Q96S95 79 aa8.9□□□□□ -0.99
ERBB2-201ENST00000269571 MRGPRG-AS1Q2M3A8 158 aa8.89□□□□□ -0.99
ERBB2-201ENST00000269571 C11orf71Q6IPW1 123 aa8.89□□□□□ -0.99
ERBB2-201ENST00000269571 TRBV6-5A0A0K0K1A5 114 aa8.89□□□□□ -0.99
ERBB2-201ENST00000269571 ZNF843Q8N446 348 aa8.89□□□□□ -0.99
ERBB2-201ENST00000269571 CDK2AP2O75956 126 aa8.88□□□□□ -0.99
ERBB2-201ENST00000269571 SPART-AS1P0CW21 52 aa8.88□□□□□ -0.99
ERBB2-201ENST00000269571 ADAMTSL4-AS1Q5T5F5 129 aa8.88□□□□□ -0.99
ERBB2-201ENST00000269571 Q8N6K4 173 aa8.88□□□□□ -0.99
ERBB2-201ENST00000269571 KLK12Q9UKR0 248 aa8.88□□□□□ -0.99
ERBB2-201ENST00000269571 ADAMTS20P59510 1910 aa8.88□□□□□ -0.99
ERBB2-201ENST00000269571 FREM2Q5SZK8 3169 aa8.88□□□□□ -0.99
ERBB2-201ENST00000269571 NDUFA1O15239 70 aa8.87□□□□□ -0.99
ERBB2-201ENST00000269571 KLLNB2CW77 178 aa8.86□□□□□ -0.99
ERBB2-201ENST00000269571 C9orf66Q5T8R8 295 aa8.86□□□□□ -0.99
ERBB2-201ENST00000269571 TRAV7A0A075B6U4 112 aa8.86□□□□□ -0.99
ERBB2-201ENST00000269571 ANKRD17O75179 2603 aaKnown RBP8.86□□□□□ -0.99
ERBB2-201ENST00000269571 TMEM89A2RUT3 159 aa8.86□□□□□ -0.99
ERBB2-201ENST00000269571 BRI3O95415 125 aa8.86□□□□□ -0.99
ERBB2-201ENST00000269571 NREPQ16612 68 aa8.86□□□□□ -0.99
ERBB2-201ENST00000269571 C4orf3Q8WVX3 66 aa8.86□□□□□ -0.99
ERBB2-201ENST00000269571 DNAJC9-AS1A6NH13 148 aa8.85□□□□□ -0.99
ERBB2-201ENST00000269571 PSMG3-AS1Q96PY0 264 aa8.85□□□□□ -0.99
ERBB2-201ENST00000269571 COL5A1P20908 1838 aaPredicted RBP8.85□□□□□ -0.99
ERBB2-201ENST00000269571 A0A1W2PPR1 153 aa8.85□□□□□ -0.99
ERBB2-201ENST00000269571 PMAIP1Q13794 54 aa8.84□□□□□ -0.99
ERBB2-201ENST00000269571 FAM222AQ5U5X8 452 aa8.84□□□□□ -0.99
ERBB2-201ENST00000269571 SPAG11BQ08648 103 aa8.84□□□□□ -0.99
ERBB2-201ENST00000269571 F8P00451 2351 aa8.84□□□□□ -0.99
ERBB2-201ENST00000269571 UBE2BP63146 152 aa8.84□□□□□ -0.99
ERBB2-201ENST00000269571 TRBV10-1A0A0K0K1A3 114 aa8.83□□□□□ -1
ERBB2-201ENST00000269571 PDE6GP18545 87 aa8.83□□□□□ -1
ERBB2-201ENST00000269571 UBE2D4Q9Y2X8 147 aa8.83□□□□□ -1
ERBB2-201ENST00000269571 COL4A2P08572 1712 aa8.83□□□□□ -1
ERBB2-201ENST00000269571 PRO0255Q9UI72 69 aa8.83□□□□□ -1
ERBB2-201ENST00000269571 MGAQ8IWI9 3026 aa8.83□□□□□ -1
ERBB2-201ENST00000269571 MIFP14174 115 aa8.82□□□□□ -1
ERBB2-201ENST00000269571 DEFB114Q30KQ6 69 aa8.82□□□□□ -1
ERBB2-201ENST00000269571 HECTD1Q9ULT8 2610 aa8.82□□□□□ -1
ERBB2-201ENST00000269571 F8WDY8 70 aa8.82□□□□□ -1
ERBB2-201ENST00000269571 C9orf85Q96MD7 179 aa8.82□□□□□ -1
ERBB2-201ENST00000269571 MUC4Q99102 2169 aa8.82□□□□□ -1
ERBB2-201ENST00000269571 WIPF1O43516 503 aa8.82□□□□□ -1
ERBB2-201ENST00000269571 COX8CQ7Z4L0 72 aa8.82□□□□□ -1
ERBB2-201ENST00000269571 SMIM11BQ8TCY0 68 aa8.82□□□□□ -1
ERBB2-201ENST00000269571 SZT2Q5T011 3432 aa8.81□□□□□ -1
ERBB2-201ENST00000269571 LINC00269Q8N2A0 174 aa8.81□□□□□ -1
ERBB2-201ENST00000269571 C6orf99Q4VX62 202 aa8.81□□□□□ -1
ERBB2-201ENST00000269571 DCANP1Q8TF63 244 aa8.81□□□□□ -1
ERBB2-201ENST00000269571 USP24Q9UPU5 2620 aa8.81□□□□□ -1
ERBB2-201ENST00000269571 LOC100131303A0A0U1RQF7 123 aa8.81□□□□□ -1
ERBB2-201ENST00000269571 ETDCA0A1B0GVM5 59 aa8.81□□□□□ -1
ERBB2-201ENST00000269571 LINC00846Q9NV44 126 aa8.81□□□□□ -1
ERBB2-201ENST00000269571 IGHV4-31P0DP07 118 aa8.8□□□□□ -1
ERBB2-201ENST00000269571 RMI2Q96E14 147 aa8.8□□□□□ -1
ERBB2-201ENST00000269571 TRBV7-6A0A0J9YX20 115 aa8.8□□□□□ -1
ERBB2-201ENST00000269571 Q6YL49 198 aa8.8□□□□□ -1
ERBB2-201ENST00000269571 FAM19A4Q96LR4 140 aa8.8□□□□□ -1
ERBB2-201ENST00000269571 VPS13AQ96RL7 3174 aa8.8□□□□□ -1
ERBB2-201ENST00000269571 MP68P56378 58 aa8.79□□□□□ -1
ERBB2-201ENST00000269571 XAGE1AQ9HD64 81 aa8.79□□□□□ -1
ERBB2-201ENST00000269571 C18orf65Q6ZTR6 163 aa8.79□□□□□ -1
ERBB2-201ENST00000269571 COX6A2Q02221 97 aa8.78□□□□□ -1
ERBB2-201ENST00000269571 LINC00242Q5T6M2 205 aa8.78□□□□□ -1
ERBB2-201ENST00000269571 FAM19A1Q7Z5A9 133 aa8.78□□□□□ -1
ERBB2-201ENST00000269571 LRCOL1A6NCL2 159 aa8.78□□□□□ -1
ERBB2-201ENST00000269571 HILS1P60008 231 aa8.78□□□□□ -1
ERBB2-201ENST00000269571 WFDC10AQ9H1F0 79 aa8.78□□□□□ -1
ERBB2-201ENST00000269571 KRTAP10-9P60411 292 aa8.77□□□□□ -1
ERBB2-201ENST00000269571 HIGD2BQ4VC39 106 aa8.77□□□□□ -1.01
ERBB2-201ENST00000269571 DIRC1Q969H9 104 aa8.77□□□□□ -1.01
ERBB2-201ENST00000269571 AVPP01185 164 aa8.77□□□□□ -1.01
ERBB2-201ENST00000269571 CCKP06307 115 aa8.77□□□□□ -1.01
ERBB2-201ENST00000269571 CCL18P55774 89 aa8.77□□□□□ -1.01
ERBB2-201ENST00000269571 LINC00336Q6ZUF6 198 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms