RNA–Protein interactions for RNA: ENST00000265304.10

SSBP1-201, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-201ENST00000265304 IFI27L1Q96BM0 104 aa9.4□□□□□ -0.9
SSBP1-201ENST00000265304 IGLV5-45A0A087WSX0 123 aa9.39□□□□□ -0.91
SSBP1-201ENST00000265304 GAGE12HA6NDE8 117 aa9.39□□□□□ -0.91
SSBP1-201ENST00000265304 PSCAO43653 123 aa9.39□□□□□ -0.91
SSBP1-201ENST00000265304 SEC11AP67812 179 aa9.39□□□□□ -0.91
SSBP1-201ENST00000265304 IGKV3OR2-268A0A0C4DH90 116 aa9.38□□□□□ -0.91
SSBP1-201ENST00000265304 TINCRA0A1B0GVN0 87 aa9.38□□□□□ -0.91
SSBP1-201ENST00000265304 XCL1P47992 114 aa9.38□□□□□ -0.91
SSBP1-201ENST00000265304 NDUFA6P56556 154 aa9.38□□□□□ -0.91
SSBP1-201ENST00000265304 COX6A2Q02221 97 aa9.38□□□□□ -0.91
SSBP1-201ENST00000265304 WFDC2Q14508 124 aa9.38□□□□□ -0.91
SSBP1-201ENST00000265304 HSPB8Q9UJY1 196 aa9.38□□□□□ -0.91
SSBP1-201ENST00000265304 A0A087WZ39 114 aa9.37□□□□□ -0.91
SSBP1-201ENST00000265304 SPATA12Q7Z6I5 190 aa9.37□□□□□ -0.91
SSBP1-201ENST00000265304 PKHD1P08F94 4074 aa9.36□□□□□ -0.91
SSBP1-201ENST00000265304 IGLC3P0DOY3 106 aa9.36□□□□□ -0.91
SSBP1-201ENST00000265304 HERVK_113P63121 156 aa9.36□□□□□ -0.91
SSBP1-201ENST00000265304 C14orf177Q52M58 125 aa9.36□□□□□ -0.91
SSBP1-201ENST00000265304 Q8N814 137 aa9.36□□□□□ -0.91
SSBP1-201ENST00000265304 C15orf56Q8N910 161 aa9.36□□□□□ -0.91
SSBP1-201ENST00000265304 IGLV4-69A0A075B6H9 119 aa9.35□□□□□ -0.91
SSBP1-201ENST00000265304 GVQW2A0A096LPI5 108 aaPredicted RBP9.35□□□□□ -0.91
SSBP1-201ENST00000265304 A0A0J9YXV3 536 aa9.35□□□□□ -0.91
SSBP1-201ENST00000265304 USP17L23D6RBM5 183 aa9.35□□□□□ -0.91
SSBP1-201ENST00000265304 COX7A2LO14548 114 aa9.35□□□□□ -0.91
SSBP1-201ENST00000265304 CFAP161Q6P656 301 aa9.35□□□□□ -0.91
SSBP1-201ENST00000265304 IGHV1-58A0A0C4DH39 117 aa9.34□□□□□ -0.91
SSBP1-201ENST00000265304 C5orf52A6NGY3 159 aa9.34□□□□□ -0.91
SSBP1-201ENST00000265304 PRSS1P07477 247 aa9.34□□□□□ -0.91
SSBP1-201ENST00000265304 HIST3H2BBQ8N257 126 aa9.34□□□□□ -0.91
SSBP1-201ENST00000265304 NTN5Q8WTR8 489 aaPredicted RBP9.34□□□□□ -0.91
SSBP1-201ENST00000265304 DNAH5Q8TE73 4624 aa9.33□□□□□ -0.92
SSBP1-201ENST00000265304 IGHV3-64A0A075B6Q5 118 aa9.33□□□□□ -0.92
SSBP1-201ENST00000265304 EREGO14944 169 aa9.33□□□□□ -0.92
SSBP1-201ENST00000265304 ODF1Q14990 250 aa9.33□□□□□ -0.92
SSBP1-201ENST00000265304 PGPEP1Q9NXJ5 209 aa9.33□□□□□ -0.92
SSBP1-201ENST00000265304 F8VRH5 84 aa9.32□□□□□ -0.92
SSBP1-201ENST00000265304 J3QL48 77 aa9.32□□□□□ -0.92
SSBP1-201ENST00000265304 FABP4P15090 132 aa9.32□□□□□ -0.92
SSBP1-201ENST00000265304 CNBPP62633 177 aaKnown RBP9.32□□□□□ -0.92
SSBP1-201ENST00000265304 CDPF1Q6NVV7 123 aa9.32□□□□□ -0.92
SSBP1-201ENST00000265304 C5orf38Q86SI9 138 aa9.32□□□□□ -0.92
SSBP1-201ENST00000265304 CDKN2A-AS1Q9UH64 79 aa9.32□□□□□ -0.92
SSBP1-201ENST00000265304 F8WDY8 70 aa9.31□□□□□ -0.92
SSBP1-201ENST00000265304 OR10D4PQ8NGN7 298 aa9.31□□□□□ -0.92
SSBP1-201ENST00000265304 MAP1LC3CQ9BXW4 147 aa9.31□□□□□ -0.92
SSBP1-201ENST00000265304 GEMIN7Q9H840 131 aaKnown RBP9.31□□□□□ -0.92
SSBP1-201ENST00000265304 CHTOPQ9Y3Y2 248 aaKnown RBP9.31□□□□□ -0.92
SSBP1-201ENST00000265304 SYS1-DBNDD2H3BUS1 97 aa9.3□□□□□ -0.92
SSBP1-201ENST00000265304 LECT2O14960 151 aa9.3□□□□□ -0.92
SSBP1-201ENST00000265304 APOMO95445 188 aa9.3□□□□□ -0.92
SSBP1-201ENST00000265304 SLPIP03973 132 aa9.3□□□□□ -0.92
SSBP1-201ENST00000265304 S100A6P06703 90 aa9.3□□□□□ -0.92
SSBP1-201ENST00000265304 KRTAP10-2P60368 255 aa9.3□□□□□ -0.92
SSBP1-201ENST00000265304 KIAA0087Q14695 138 aa9.3□□□□□ -0.92
SSBP1-201ENST00000265304 HIST1H2BLQ99880 126 aa9.3□□□□□ -0.92
SSBP1-201ENST00000265304 MRPL35Q9NZE8 188 aaKnown RBP9.3□□□□□ -0.92
SSBP1-201ENST00000265304 IGLV5-39A0A0G2JS06 123 aa9.29□□□□□ -0.92
SSBP1-201ENST00000265304 C11orf86A6NJI1 115 aa9.29□□□□□ -0.92
SSBP1-201ENST00000265304 ZNF22P17026 224 aaPredicted RBP9.29□□□□□ -0.92
SSBP1-201ENST00000265304 MALP21145 153 aa9.29□□□□□ -0.92
SSBP1-201ENST00000265304 PET117Q6UWS5 81 aa9.29□□□□□ -0.92
SSBP1-201ENST00000265304 C2orf48Q96LS8 159 aa9.29□□□□□ -0.92
SSBP1-201ENST00000265304 CHAC1Q9BUX1 264 aa9.29□□□□□ -0.92
SSBP1-201ENST00000265304 SNRPEP62304 92 aaKnown RBP9.28□□□□□ -0.92
SSBP1-201ENST00000265304 LINC01545Q5VT33 79 aa9.28□□□□□ -0.92
SSBP1-201ENST00000265304 DYNC1H1Q14204 4646 aaKnown RBP9.28□□□□□ -0.92
SSBP1-201ENST00000265304 SMIM1B2RUZ4 78 aa9.27□□□□□ -0.93
SSBP1-201ENST00000265304 C3orf79P0CE67 100 aa9.27□□□□□ -0.93
SSBP1-201ENST00000265304 LINC00469Q8N7U9 141 aa9.27□□□□□ -0.93
SSBP1-201ENST00000265304 C9orf163Q8N9P6 203 aa9.27□□□□□ -0.93
SSBP1-201ENST00000265304 hDV102S1A0JD36 115 aa9.26□□□□□ -0.93
SSBP1-201ENST00000265304 H3BRM9 83 aa9.26□□□□□ -0.93
SSBP1-201ENST00000265304 PLNP26678 52 aa9.26□□□□□ -0.93
SSBP1-201ENST00000265304 Q8IZM0 81 aa9.26□□□□□ -0.93
SSBP1-201ENST00000265304 LRP1BQ9NZR2 4599 aa9.25□□□□□ -0.93
SSBP1-201ENST00000265304 ORAOV1Q8WV07 137 aa9.25□□□□□ -0.93
SSBP1-201ENST00000265304 TMEM223A0PJW6 202 aa9.24□□□□□ -0.93
SSBP1-201ENST00000265304 ZNF561-AS1K7EIQ3 104 aa9.24□□□□□ -0.93
SSBP1-201ENST00000265304 DPM2O94777 84 aa9.24□□□□□ -0.93
SSBP1-201ENST00000265304 S100A2P29034 98 aa9.24□□□□□ -0.93
SSBP1-201ENST00000265304 RNF151Q2KHN1 245 aa9.24□□□□□ -0.93
SSBP1-201ENST00000265304 EPPK1P58107 5090 aaKnown RBP9.24□□□□□ -0.93
SSBP1-201ENST00000265304 DNAH8Q96JB1 4490 aa9.24□□□□□ -0.93
SSBP1-201ENST00000265304 SPAG11BQ08648 103 aa9.23□□□□□ -0.93
SSBP1-201ENST00000265304 HIGD2BQ4VC39 106 aa9.23□□□□□ -0.93
SSBP1-201ENST00000265304 IGLV5-52A0A0A0MRZ9 124 aa9.22□□□□□ -0.93
SSBP1-201ENST00000265304 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.22□□□□□ -0.93
SSBP1-201ENST00000265304 IGKCP01834 107 aa9.22□□□□□ -0.93
SSBP1-201ENST00000265304 AKR1D1P51857 326 aa9.22□□□□□ -0.93
SSBP1-201ENST00000265304 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.21□□□□□ -0.94
SSBP1-201ENST00000265304 SPINK8P0C7L1 97 aa9.21□□□□□ -0.94
SSBP1-201ENST00000265304 SYCNQ0VAF6 134 aa9.21□□□□□ -0.94
SSBP1-201ENST00000265304 TMEM170BQ5T4T1 132 aa9.21□□□□□ -0.94
SSBP1-201ENST00000265304 SDIM1Q6ZPB5 146 aa9.21□□□□□ -0.94
SSBP1-201ENST00000265304 H0Y8G0 127 aa9.2□□□□□ -0.94
SSBP1-201ENST00000265304 GCSHP23434 173 aa9.2□□□□□ -0.94
SSBP1-201ENST00000265304 CXCL5P42830 114 aa9.2□□□□□ -0.94
SSBP1-201ENST00000265304 KRTDAPP60985 99 aa9.2□□□□□ -0.94
SSBP1-201ENST00000265304 COX7B2Q8TF08 81 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms