RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 MIFP14174 115 aa8.78□□□□□ -1
SMG6-201ENST00000263073 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.78□□□□□ -1
SMG6-201ENST00000263073 MRPS36P82909 103 aaKnown RBP8.78□□□□□ -1
SMG6-201ENST00000263073 ZNF843Q8N446 348 aa8.78□□□□□ -1
SMG6-201ENST00000263073 CEP350Q5VT06 3117 aa8.78□□□□□ -1
SMG6-201ENST00000263073 CD164L2Q6UWJ8 174 aa8.77□□□□□ -1
SMG6-201ENST00000263073 LRRC75A-AS1Q8N1F1 130 aa8.77□□□□□ -1
SMG6-201ENST00000263073 ZNF702PQ9H963 129 aa8.77□□□□□ -1.01
SMG6-201ENST00000263073 ZNF73O43830 326 aaPredicted RBP8.77□□□□□ -1.01
SMG6-201ENST00000263073 Q6JHZ5 121 aa8.77□□□□□ -1.01
SMG6-201ENST00000263073 SORL1Q92673 2214 aa8.76□□□□□ -1.01
SMG6-201ENST00000263073 ATRXP46100 2492 aa8.76□□□□□ -1.01
SMG6-201ENST00000263073 EML5Q05BV3 1969 aa8.76□□□□□ -1.01
SMG6-201ENST00000263073 LINC00242Q5T6M2 205 aa8.76□□□□□ -1.01
SMG6-201ENST00000263073 CDC42SE2Q9NRR3 84 aa8.76□□□□□ -1.01
SMG6-201ENST00000263073 A0A096LNJ9 63 aa8.76□□□□□ -1.01
SMG6-201ENST00000263073 SMIM9A6NGZ8 99 aa8.76□□□□□ -1.01
SMG6-201ENST00000263073 PSPHP1O15172 72 aa8.76□□□□□ -1.01
SMG6-201ENST00000263073 CDSNQ15517 529 aa8.76□□□□□ -1.01
SMG6-201ENST00000263073 Q8N6K4 173 aa8.76□□□□□ -1.01
SMG6-201ENST00000263073 C11orf71Q6IPW1 123 aa8.75□□□□□ -1.01
SMG6-201ENST00000263073 UNQ6190/PRO20217Q6UXQ8 127 aa8.75□□□□□ -1.01
SMG6-201ENST00000263073 RETNLBQ9BQ08 111 aa8.75□□□□□ -1.01
SMG6-201ENST00000263073 CYSRT1A8MQ03 144 aa8.75□□□□□ -1.01
SMG6-201ENST00000263073 M0R378 163 aa8.75□□□□□ -1.01
SMG6-201ENST00000263073 DEFB116Q30KQ4 102 aa8.75□□□□□ -1.01
SMG6-201ENST00000263073 DNAH12Q6ZR08 3092 aa8.75□□□□□ -1.01
SMG6-201ENST00000263073 A8MTW9 85 aa8.74□□□□□ -1.01
SMG6-201ENST00000263073 PRR15LQ9BU68 103 aa8.74□□□□□ -1.01
SMG6-201ENST00000263073 NDUFC1O43677 76 aa8.74□□□□□ -1.01
SMG6-201ENST00000263073 HILS1P60008 231 aa8.74□□□□□ -1.01
SMG6-201ENST00000263073 NTM-AS1Q6ZSK4 140 aa8.74□□□□□ -1.01
SMG6-201ENST00000263073 RETNQ9HD89 108 aa8.74□□□□□ -1.01
SMG6-201ENST00000263073 CSPG4Q6UVK1 2322 aa8.74□□□□□ -1.01
SMG6-201ENST00000263073 BDP1A6H8Y1 2624 aa8.74□□□□□ -1.01
SMG6-201ENST00000263073 IGLV4-60A0A075B6I1 120 aa8.73□□□□□ -1.01
SMG6-201ENST00000263073 SMIM1B2RUZ4 78 aa8.73□□□□□ -1.01
SMG6-201ENST00000263073 KPRPQ5T749 579 aaPredicted RBP8.73□□□□□ -1.01
SMG6-201ENST00000263073 Q8N814 137 aa8.73□□□□□ -1.01
SMG6-201ENST00000263073 CHCHD7Q9BUK0 85 aa8.72□□□□□ -1.01
SMG6-201ENST00000263073 ATP5EP56381 51 aaPredicted RBP8.72□□□□□ -1.01
SMG6-201ENST00000263073 UBE2D3P61077 147 aa8.72□□□□□ -1.01
SMG6-201ENST00000263073 UBE2D2P62837 147 aa8.72□□□□□ -1.01
SMG6-201ENST00000263073 DSCAMO60469 2012 aa8.72□□□□□ -1.01
SMG6-201ENST00000263073 Q6ZSN1 163 aa8.72□□□□□ -1.01
SMG6-201ENST00000263073 CNFNQ9BYD5 112 aa8.71□□□□□ -1.01
SMG6-201ENST00000263073 TRBV10-3A0A0K0K1G6 114 aa8.71□□□□□ -1.01
SMG6-201ENST00000263073 C6orf223Q8N319 242 aa8.71□□□□□ -1.02
SMG6-201ENST00000263073 PMAIP1Q13794 54 aa8.71□□□□□ -1.02
SMG6-201ENST00000263073 LINC00208Q96KT6 92 aa8.71□□□□□ -1.02
SMG6-201ENST00000263073 TECTAO75443 2155 aa8.71□□□□□ -1.02
SMG6-201ENST00000263073 Q8N9L7 120 aa8.71□□□□□ -1.02
SMG6-201ENST00000263073 SMIM26A0A096LP01 95 aa8.7□□□□□ -1.02
SMG6-201ENST00000263073 C14orf177Q52M58 125 aa8.7□□□□□ -1.02
SMG6-201ENST00000263073 PLA2G2AP14555 144 aa8.7□□□□□ -1.02
SMG6-201ENST00000263073 AVPP01185 164 aa8.7□□□□□ -1.02
SMG6-201ENST00000263073 PTPRSQ13332 1948 aa8.7□□□□□ -1.02
SMG6-201ENST00000263073 PTPN13Q12923 2485 aa8.69□□□□□ -1.02
SMG6-201ENST00000263073 BEAN1Q3B7T3 259 aa8.69□□□□□ -1.02
SMG6-201ENST00000263073 PCOTHQ58A44 107 aa8.69□□□□□ -1.02
SMG6-201ENST00000263073 DHRS4-AS1Q9P1J3 65 aa8.69□□□□□ -1.02
SMG6-201ENST00000263073 TRAV7A0A075B6U4 112 aa8.69□□□□□ -1.02
SMG6-201ENST00000263073 SERP1Q9Y6X1 66 aa8.69□□□□□ -1.02
SMG6-201ENST00000263073 IGLV1-40P01703 118 aa8.69□□□□□ -1.02
SMG6-201ENST00000263073 Q8IZM0 81 aa8.68□□□□□ -1.02
SMG6-201ENST00000263073 Q8N3U1 123 aa8.68□□□□□ -1.02
SMG6-201ENST00000263073 PSMG3-AS1Q96PY0 264 aa8.68□□□□□ -1.02
SMG6-201ENST00000263073 PLAC8L1A1L4L8 177 aa8.68□□□□□ -1.02
SMG6-201ENST00000263073 NAV3Q8IVL0 2385 aa8.68□□□□□ -1.02
SMG6-201ENST00000263073 ESRGQ1W209 222 aa8.67□□□□□ -1.02
SMG6-201ENST00000263073 LINC01006Q8NI28 216 aa8.67□□□□□ -1.02
SMG6-201ENST00000263073 LELP1Q5T871 98 aa8.67□□□□□ -1.02
SMG6-201ENST00000263073 CDIP1Q9H305 208 aa8.67□□□□□ -1.02
SMG6-201ENST00000263073 Q9UF83 564 aa8.67□□□□□ -1.02
SMG6-201ENST00000263073 ANKHD1Q8IWZ3 2542 aaKnown RBP8.67□□□□□ -1.02
SMG6-201ENST00000263073 PRYO14603 147 aa8.67□□□□□ -1.02
SMG6-201ENST00000263073 K7ERS5 55 aa8.66□□□□□ -1.02
SMG6-201ENST00000263073 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.66□□□□□ -1.02
SMG6-201ENST00000263073 LINC00846Q9NV44 126 aa8.66□□□□□ -1.02
SMG6-201ENST00000263073 RPL28P46779 137 aaKnown RBP8.66□□□□□ -1.02
SMG6-201ENST00000263073 LINC01547P58512 204 aaPredicted RBP8.66□□□□□ -1.02
SMG6-201ENST00000263073 PRORYQ9H606 182 aa8.66□□□□□ -1.02
SMG6-201ENST00000263073 CSDC2Q9Y534 153 aaKnown RBP8.66□□□□□ -1.02
SMG6-201ENST00000263073 COX17Q14061 63 aa8.66□□□□□ -1.02
SMG6-201ENST00000263073 HIVEP2P31629 2446 aa8.65□□□□□ -1.02
SMG6-201ENST00000263073 CENPFP49454 3210 aa8.65□□□□□ -1.02
SMG6-201ENST00000263073 LINC00575Q6W349 94 aa8.65□□□□□ -1.02
SMG6-201ENST00000263073 C1orf137Q5JT78 98 aa8.65□□□□□ -1.02
SMG6-201ENST00000263073 MUC22E2RYF6 1773 aaPredicted RBP8.65□□□□□ -1.03
SMG6-201ENST00000263073 C2CD3Q4AC94 2353 aa8.65□□□□□ -1.03
SMG6-201ENST00000263073 CUL9Q8IWT3 2517 aa8.64□□□□□ -1.03
SMG6-201ENST00000263073 SMR3AQ99954 134 aa8.64□□□□□ -1.03
SMG6-201ENST00000263073 MUC6Q6W4X9 2439 aa8.64□□□□□ -1.03
SMG6-201ENST00000263073 ODF3L2Q3SX64 289 aa8.64□□□□□ -1.03
SMG6-201ENST00000263073 CEP192Q8TEP8 1941 aa8.63□□□□□ -1.03
SMG6-201ENST00000263073 OXLD1Q5BKU9 147 aa8.63□□□□□ -1.03
SMG6-201ENST00000263073 FSTL3O95633 263 aa8.63□□□□□ -1.03
SMG6-201ENST00000263073 IGHV6-1A0A0B4J1U7 121 aa8.63□□□□□ -1.03
SMG6-201ENST00000263073 LY6G6DO95868 133 aa8.63□□□□□ -1.03
SMG6-201ENST00000263073 EXPH5Q8NEV8 1989 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 101.2 ms