RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 DEFB135Q30KP9 77 aa9.65□□□□□ -0.86
VMP1-201ENST00000262291 A4D1N5 150 aa9.64□□□□□ -0.87
VMP1-201ENST00000262291 LINC00694P0DN24 101 aa9.64□□□□□ -0.87
VMP1-201ENST00000262291 TRGV4A0A0C4DH28 118 aa9.64□□□□□ -0.87
VMP1-201ENST00000262291 BAHCC1Q9P281 2608 aa9.64□□□□□ -0.87
VMP1-201ENST00000262291 UBE2D4Q9Y2X8 147 aa9.63□□□□□ -0.87
VMP1-201ENST00000262291 LOC107984640A0A0U1RRK4 108 aa9.63□□□□□ -0.87
VMP1-201ENST00000262291 RPL36AP83881 106 aaKnown RBP9.63□□□□□ -0.87
VMP1-201ENST00000262291 NTM-AS1Q6ZSK4 140 aa9.63□□□□□ -0.87
VMP1-201ENST00000262291 RPL36ALQ969Q0 106 aaKnown RBP9.63□□□□□ -0.87
VMP1-201ENST00000262291 DNAJC30Q96LL9 226 aa9.62□□□□□ -0.87
VMP1-201ENST00000262291 ZNF22P17026 224 aaPredicted RBP9.62□□□□□ -0.87
VMP1-201ENST00000262291 MRPL23Q16540 153 aaKnown RBP9.62□□□□□ -0.87
VMP1-201ENST00000262291 MAST4O15021 2626 aa9.62□□□□□ -0.87
VMP1-201ENST00000262291 LINC01620Q4KN68 170 aa9.62□□□□□ -0.87
VMP1-201ENST00000262291 A8MZ25 164 aa9.61□□□□□ -0.87
VMP1-201ENST00000262291 IGHV3-33P01772 117 aa9.61□□□□□ -0.87
VMP1-201ENST00000262291 X6R8D5 127 aa9.61□□□□□ -0.87
VMP1-201ENST00000262291 PKD1L1Q8TDX9 2849 aa9.61□□□□□ -0.87
VMP1-201ENST00000262291 TRAV8-3A0A0A6YYJ7 113 aa9.61□□□□□ -0.87
VMP1-201ENST00000262291 HERVK_113P61574 105 aa9.61□□□□□ -0.87
VMP1-201ENST00000262291 KRTAP24-1Q3LI83 254 aa9.61□□□□□ -0.87
VMP1-201ENST00000262291 OXLD1Q5BKU9 147 aa9.61□□□□□ -0.87
VMP1-201ENST00000262291 DGAT2L7PQ6IED9 249 aa9.6□□□□□ -0.87
VMP1-201ENST00000262291 Q6Q795 121 aa9.6□□□□□ -0.87
VMP1-201ENST00000262291 OVOL2Q9BRP0 275 aa9.6□□□□□ -0.87
VMP1-201ENST00000262291 UBE2WQ96B02 151 aa9.6□□□□□ -0.87
VMP1-201ENST00000262291 AMELXQ99217 191 aa9.6□□□□□ -0.87
VMP1-201ENST00000262291 FHL2Q14192 279 aa9.59□□□□□ -0.87
VMP1-201ENST00000262291 PAPPA-AS1Q5QFB9 102 aa9.59□□□□□ -0.87
VMP1-201ENST00000262291 PYGO1Q9Y3Y4 419 aa9.59□□□□□ -0.87
VMP1-201ENST00000262291 A0A096LPF7 62 aa9.59□□□□□ -0.87
VMP1-201ENST00000262291 TMEM223A0PJW6 202 aa9.59□□□□□ -0.87
VMP1-201ENST00000262291 KLK5Q9Y337 293 aaPredicted RBP9.59□□□□□ -0.87
VMP1-201ENST00000262291 J3QQQ9 107 aa9.58□□□□□ -0.88
VMP1-201ENST00000262291 C2orf82Q6UX34 121 aa9.58□□□□□ -0.88
VMP1-201ENST00000262291 MUSTN1Q8IVN3 82 aa9.58□□□□□ -0.88
VMP1-201ENST00000262291 CSDC2Q9Y534 153 aaKnown RBP9.58□□□□□ -0.88
VMP1-201ENST00000262291 FAM236AA0A1B0GUQ0 79 aa9.57□□□□□ -0.88
VMP1-201ENST00000262291 FAM236BA0A1B0GV22 79 aa9.57□□□□□ -0.88
VMP1-201ENST00000262291 LGALS3P17931 250 aaKnown RBP9.57□□□□□ -0.88
VMP1-201ENST00000262291 ATXN8Q156A1 80 aa9.57□□□□□ -0.88
VMP1-201ENST00000262291 FAM222AQ5U5X8 452 aa9.57□□□□□ -0.88
VMP1-201ENST00000262291 SPANXA1Q9NS26 97 aa9.57□□□□□ -0.88
VMP1-201ENST00000262291 TRAV13-1A0A0B4J241 112 aa9.57□□□□□ -0.88
VMP1-201ENST00000262291 IGKV3OR2-268A0A0C4DH90 116 aa9.57□□□□□ -0.88
VMP1-201ENST00000262291 TRBV10-1A0A0K0K1A3 114 aa9.57□□□□□ -0.88
VMP1-201ENST00000262291 TRIAP1O43715 76 aa9.56□□□□□ -0.88
VMP1-201ENST00000262291 COX6A2Q02221 97 aa9.56□□□□□ -0.88
VMP1-201ENST00000262291 DAZ4Q86SG3 579 aaKnown RBP9.55□□□□□ -0.88
VMP1-201ENST00000262291 DAZ3Q9NR90 486 aaKnown RBP9.55□□□□□ -0.88
VMP1-201ENST00000262291 TRBV10-2A0A0K0K1G8 114 aa9.55□□□□□ -0.88
VMP1-201ENST00000262291 IGHV4-30-4P0DP06 118 aa9.55□□□□□ -0.88
VMP1-201ENST00000262291 MRPS36P82909 103 aaKnown RBP9.55□□□□□ -0.88
VMP1-201ENST00000262291 CLEC2BQ92478 149 aa9.54□□□□□ -0.88
VMP1-201ENST00000262291 COL6A5A8TX70 2615 aa9.54□□□□□ -0.88
VMP1-201ENST00000262291 IGHV4-28A0A0C4DH34 117 aa9.54□□□□□ -0.88
VMP1-201ENST00000262291 IGHV3-30-3P0DP02 117 aa9.54□□□□□ -0.88
VMP1-201ENST00000262291 RPL13AP40429 203 aaKnown RBP9.54□□□□□ -0.88
VMP1-201ENST00000262291 NPC2P61916 151 aa9.54□□□□□ -0.88
VMP1-201ENST00000262291 TMEM126AQ9H061 195 aa9.54□□□□□ -0.88
VMP1-201ENST00000262291 CDKN2A-AS1Q9UH64 79 aa9.54□□□□□ -0.88
VMP1-201ENST00000262291 TRBV6-4A0A1B0GX49 114 aa9.54□□□□□ -0.88
VMP1-201ENST00000262291 H7C423 109 aa9.54□□□□□ -0.88
VMP1-201ENST00000262291 LEPROTO15243 131 aa9.54□□□□□ -0.88
VMP1-201ENST00000262291 C9orf153Q5TBE3 101 aa9.54□□□□□ -0.88
VMP1-201ENST00000262291 WFDC9Q8NEX5 89 aa9.54□□□□□ -0.88
VMP1-201ENST00000262291 TIMM21Q9BVV7 248 aa9.54□□□□□ -0.88
VMP1-201ENST00000262291 CELA1Q9UNI1 258 aa9.54□□□□□ -0.88
VMP1-201ENST00000262291 UBE2L6O14933 153 aa9.53□□□□□ -0.88
VMP1-201ENST00000262291 GYPEP15421 78 aa9.53□□□□□ -0.88
VMP1-201ENST00000262291 TMEM243Q9BU79 118 aa9.53□□□□□ -0.88
VMP1-201ENST00000262291 HTN3P15516 51 aa9.53□□□□□ -0.88
VMP1-201ENST00000262291 KRTAP10-11P60412 298 aa9.53□□□□□ -0.88
VMP1-201ENST00000262291 PRSS2P07478 247 aa9.52□□□□□ -0.89
VMP1-201ENST00000262291 RETNQ9HD89 108 aa9.52□□□□□ -0.89
VMP1-201ENST00000262291 APOC4P55056 127 aa9.52□□□□□ -0.89
VMP1-201ENST00000262291 TINCRA0A1B0GVN0 87 aa9.51□□□□□ -0.89
VMP1-201ENST00000262291 PRIMA1Q86XR5 153 aa9.51□□□□□ -0.89
VMP1-201ENST00000262291 NOTCH1P46531 2555 aa9.51□□□□□ -0.89
VMP1-201ENST00000262291 KIR2DL5BQ8NHK3 375 aa9.51□□□□□ -0.89
VMP1-201ENST00000262291 IGLV4-60A0A075B6I1 120 aa9.5□□□□□ -0.89
VMP1-201ENST00000262291 HERVK_113P63121 156 aa9.5□□□□□ -0.89
VMP1-201ENST00000262291 LINC00242Q5T6M2 205 aa9.5□□□□□ -0.89
VMP1-201ENST00000262291 A0A0B4J2C4 111 aa9.5□□□□□ -0.89
VMP1-201ENST00000262291 CDC42SE2Q9NRR3 84 aa9.5□□□□□ -0.89
VMP1-201ENST00000262291 FAM19A5Q7Z5A7 132 aaPredicted RBP9.49□□□□□ -0.89
VMP1-201ENST00000262291 IGHV1-58A0A0C4DH39 117 aa9.48□□□□□ -0.89
VMP1-201ENST00000262291 LINC00612Q8N6U2 182 aa9.48□□□□□ -0.89
VMP1-201ENST00000262291 ZNF625Q96I27 306 aaPredicted RBP9.48□□□□□ -0.89
VMP1-201ENST00000262291 TMEM101Q96IK0 257 aa9.48□□□□□ -0.89
VMP1-201ENST00000262291 VSIG2Q96IQ7 327 aa9.48□□□□□ -0.89
VMP1-201ENST00000262291 TRBV6-8A0A0A6YYG3 113 aa9.48□□□□□ -0.89
VMP1-201ENST00000262291 SMIM9A6NGZ8 99 aa9.48□□□□□ -0.89
VMP1-201ENST00000262291 C5orf47Q569G3 176 aa9.48□□□□□ -0.89
VMP1-201ENST00000262291 A0A0U1RRA0 63 aa9.47□□□□□ -0.89
VMP1-201ENST00000262291 DAD1P61803 113 aa9.47□□□□□ -0.89
VMP1-201ENST00000262291 CLPSL2Q6UWE3 100 aa9.47□□□□□ -0.89
VMP1-201ENST00000262291 Q8NAQ8 132 aa9.47□□□□□ -0.89
VMP1-201ENST00000262291 NDUFA12Q9UI09 145 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 102.8 ms