RNA–Protein interactions for RNA: ENST00000261866.11

SPG11-201, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPG11, Length 7,774 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-201ENST00000261866 SPATA12Q7Z6I5 190 aa8.88□□□□□ -0.99
SPG11-201ENST00000261866 LINC00308Q8TCZ7 52 aa8.88□□□□□ -0.99
SPG11-201ENST00000261866 HIGD1BQ9P298 99 aa8.88□□□□□ -0.99
SPG11-201ENST00000261866 LINC00959A0A1B0GUT2 108 aa8.88□□□□□ -0.99
SPG11-201ENST00000261866 ANKHD1Q8IWZ3 2542 aaKnown RBP8.88□□□□□ -0.99
SPG11-201ENST00000261866 COA6Q5JTJ3 125 aaKnown RBP8.87□□□□□ -0.99
SPG11-201ENST00000261866 RNASE8Q8TDE3 154 aaKnown RBP8.87□□□□□ -0.99
SPG11-201ENST00000261866 COL5A1P20908 1838 aaPredicted RBP8.87□□□□□ -0.99
SPG11-201ENST00000261866 C9orf116Q5BN46 136 aaPredicted RBP8.87□□□□□ -0.99
SPG11-201ENST00000261866 PTPRSQ13332 1948 aa8.87□□□□□ -0.99
SPG11-201ENST00000261866 IGLV4-69A0A075B6H9 119 aa8.87□□□□□ -0.99
SPG11-201ENST00000261866 PLA2G1BP04054 148 aaKnown RBP8.87□□□□□ -0.99
SPG11-201ENST00000261866 CRIP2P52943 208 aaPredicted RBP8.87□□□□□ -0.99
SPG11-201ENST00000261866 Q6ZTC4 211 aa8.87□□□□□ -0.99
SPG11-201ENST00000261866 PRR15LQ9BU68 103 aa8.87□□□□□ -0.99
SPG11-201ENST00000261866 H7C423 109 aa8.87□□□□□ -0.99
SPG11-201ENST00000261866 DEFB116Q30KQ4 102 aa8.87□□□□□ -0.99
SPG11-201ENST00000261866 LELP1Q5T871 98 aa8.86□□□□□ -0.99
SPG11-201ENST00000261866 CELA1Q9UNI1 258 aa8.86□□□□□ -0.99
SPG11-201ENST00000261866 FSTL3O95633 263 aa8.86□□□□□ -0.99
SPG11-201ENST00000261866 EML5Q05BV3 1969 aa8.86□□□□□ -0.99
SPG11-201ENST00000261866 H3BQ85 93 aa8.85□□□□□ -0.99
SPG11-201ENST00000261866 MT-ATP8P03928 68 aa8.85□□□□□ -0.99
SPG11-201ENST00000261866 ODF3L2Q3SX64 289 aa8.85□□□□□ -0.99
SPG11-201ENST00000261866 TRBV6-5A0A0K0K1A5 114 aa8.84□□□□□ -0.99
SPG11-201ENST00000261866 CD164L2Q6UWJ8 174 aa8.84□□□□□ -0.99
SPG11-201ENST00000261866 SPANXDQ9BXN6 97 aa8.84□□□□□ -0.99
SPG11-201ENST00000261866 NUPR2A6NF83 97 aa8.84□□□□□ -0.99
SPG11-201ENST00000261866 TRIAP1O43715 76 aa8.83□□□□□ -1
SPG11-201ENST00000261866 IGLV5-52A0A0A0MRZ9 124 aa8.83□□□□□ -1
SPG11-201ENST00000261866 IBA57-AS1B1ANH7 110 aa8.83□□□□□ -1
SPG11-201ENST00000261866 SPANXB1Q9NS25 103 aaPredicted RBP8.83□□□□□ -1
SPG11-201ENST00000261866 LOC107984640A0A0U1RRK4 108 aa8.83□□□□□ -1
SPG11-201ENST00000261866 MRPL55Q7Z7F7 128 aaKnown RBP8.83□□□□□ -1
SPG11-201ENST00000261866 ESRGQ1W209 222 aa8.82□□□□□ -1
SPG11-201ENST00000261866 SERP2Q8N6R1 65 aa8.82□□□□□ -1
SPG11-201ENST00000261866 NCOR2Q9Y618 2525 aa8.82□□□□□ -1
SPG11-201ENST00000261866 MRGPRG-AS1Q2M3A8 158 aa8.82□□□□□ -1
SPG11-201ENST00000261866 Q6Q795 121 aa8.82□□□□□ -1
SPG11-201ENST00000261866 IGF2RP11717 2491 aa8.82□□□□□ -1
SPG11-201ENST00000261866 PRYO14603 147 aa8.82□□□□□ -1
SPG11-201ENST00000261866 NRACQ8N912 160 aa8.81□□□□□ -1
SPG11-201ENST00000261866 PRR3P79522 188 aaKnown RBP8.81□□□□□ -1
SPG11-201ENST00000261866 KLLNB2CW77 178 aa8.81□□□□□ -1
SPG11-201ENST00000261866 ABCA2Q9BZC7 2435 aa8.81□□□□□ -1
SPG11-201ENST00000261866 IGHV6-1A0A0B4J1U7 121 aa8.81□□□□□ -1
SPG11-201ENST00000261866 CYSRT1A8MQ03 144 aa8.81□□□□□ -1
SPG11-201ENST00000261866 Q6ZQY7 126 aa8.81□□□□□ -1
SPG11-201ENST00000261866 C6orf223Q8N319 242 aa8.81□□□□□ -1
SPG11-201ENST00000261866 AGRNO00468 2067 aa8.8□□□□□ -1
SPG11-201ENST00000261866 UNQ6190/PRO20217Q6UXQ8 127 aa8.8□□□□□ -1
SPG11-201ENST00000261866 H3BT86 120 aa8.8□□□□□ -1
SPG11-201ENST00000261866 U3KQK5 164 aa8.79□□□□□ -1
SPG11-201ENST00000261866 M0QXV9 152 aa8.79□□□□□ -1
SPG11-201ENST00000261866 Q8N9L7 120 aa8.79□□□□□ -1
SPG11-201ENST00000261866 LRP4O75096 1905 aa8.79□□□□□ -1
SPG11-201ENST00000261866 TRBV27A0A0K0K1C4 114 aa8.79□□□□□ -1
SPG11-201ENST00000261866 PCOTHQ58A44 107 aa8.79□□□□□ -1
SPG11-201ENST00000261866 CCDC168Q8NDH2 2452 aa8.79□□□□□ -1
SPG11-201ENST00000261866 LINC01556Q5JQF7 62 aa8.78□□□□□ -1
SPG11-201ENST00000261866 M0R378 163 aa8.78□□□□□ -1
SPG11-201ENST00000261866 COX6A2Q02221 97 aa8.78□□□□□ -1
SPG11-201ENST00000261866 SMIM11BQ8TCY0 68 aa8.78□□□□□ -1
SPG11-201ENST00000261866 IGLV4-60A0A075B6I1 120 aa8.78□□□□□ -1
SPG11-201ENST00000261866 NDUFC2-KCTD14E9PQ53 114 aa8.77□□□□□ -1.01
SPG11-201ENST00000261866 NAV3Q8IVL0 2385 aa8.77□□□□□ -1.01
SPG11-201ENST00000261866 LINC00694P0DN24 101 aa8.77□□□□□ -1.01
SPG11-201ENST00000261866 IGLV1-51P01701 117 aa8.77□□□□□ -1.01
SPG11-201ENST00000261866 LINC00643Q86TS7 51 aa8.76□□□□□ -1.01
SPG11-201ENST00000261866 C10orf25Q5T742 122 aa8.76□□□□□ -1.01
SPG11-201ENST00000261866 FAM240AA0A1B0GVK7 77 aa8.75□□□□□ -1.01
SPG11-201ENST00000261866 C1orf137Q5JT78 98 aa8.75□□□□□ -1.01
SPG11-201ENST00000261866 SOSTDC1Q6X4U4 206 aa8.75□□□□□ -1.01
SPG11-201ENST00000261866 SBSPONQ8IVN8 264 aa8.75□□□□□ -1.01
SPG11-201ENST00000261866 CDC42SE2Q9NRR3 84 aa8.75□□□□□ -1.01
SPG11-201ENST00000261866 Q6ZSN1 163 aa8.75□□□□□ -1.01
SPG11-201ENST00000261866 CACNA1AO00555 2505 aa8.75□□□□□ -1.01
SPG11-201ENST00000261866 WDR87Q6ZQQ6 2873 aa8.74□□□□□ -1.01
SPG11-201ENST00000261866 ZNF706Q9Y5V0 76 aaPredicted RBP8.74□□□□□ -1.01
SPG11-201ENST00000261866 MRPS12O15235 138 aaKnown RBP8.74□□□□□ -1.01
SPG11-201ENST00000261866 ZNF73O43830 326 aaPredicted RBP8.74□□□□□ -1.01
SPG11-201ENST00000261866 NAV2Q8IVL1 2488 aa8.74□□□□□ -1.01
SPG11-201ENST00000261866 PDE6GP18545 87 aa8.74□□□□□ -1.01
SPG11-201ENST00000261866 FHL2Q14192 279 aa8.73□□□□□ -1.01
SPG11-201ENST00000261866 ADAMTS20P59510 1910 aa8.73□□□□□ -1.01
SPG11-201ENST00000261866 BEAN1Q3B7T3 259 aa8.73□□□□□ -1.01
SPG11-201ENST00000261866 C1orf134Q5TEV5 83 aa8.72□□□□□ -1.01
SPG11-201ENST00000261866 PYGO1Q9Y3Y4 419 aa8.72□□□□□ -1.01
SPG11-201ENST00000261866 TIMM17BO60830 172 aa8.72□□□□□ -1.01
SPG11-201ENST00000261866 DHRS4-AS1Q9P1J3 65 aa8.72□□□□□ -1.01
SPG11-201ENST00000261866 ZNF580Q9UK33 172 aa8.71□□□□□ -1.01
SPG11-201ENST00000261866 POLR2KP53803 58 aaKnown RBP8.71□□□□□ -1.02
SPG11-201ENST00000261866 Q9UF83 564 aa8.71□□□□□ -1.02
SPG11-201ENST00000261866 TRBV7-6A0A0J9YX20 115 aa8.71□□□□□ -1.02
SPG11-201ENST00000261866 C16orf95Q9H693 158 aa8.7□□□□□ -1.02
SPG11-201ENST00000261866 DOPEY1Q5JWR5 2465 aa8.7□□□□□ -1.02
SPG11-201ENST00000261866 REG3GQ6UW15 175 aa8.69□□□□□ -1.02
SPG11-201ENST00000261866 LINC00474Q9P2X8 69 aa8.69□□□□□ -1.02
SPG11-201ENST00000261866 TRBV10-3A0A0K0K1G6 114 aa8.69□□□□□ -1.02
SPG11-201ENST00000261866 LINC00208Q96KT6 92 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms