RNA–Protein interactions for RNA: ENST00000261693.10

SCARB1-201, Transcript of scavenger receptor class B member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCARB1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-201ENST00000261693 FLNAP21333 2647 aaKnown RBP13.75□□□□□ -0.21
SCARB1-201ENST00000261693 UBE2L6O14933 153 aa13.75□□□□□ -0.21
SCARB1-201ENST00000261693 Q6Q795 121 aa13.75□□□□□ -0.21
SCARB1-201ENST00000261693 SHISA2Q6UWI4 295 aa13.75□□□□□ -0.21
SCARB1-201ENST00000261693 FAM19A3Q7Z5A8 133 aa13.75□□□□□ -0.21
SCARB1-201ENST00000261693 WFDC10AQ9H1F0 79 aa13.74□□□□□ -0.21
SCARB1-201ENST00000261693 DEFB113Q30KQ7 82 aa13.73□□□□□ -0.21
SCARB1-201ENST00000261693 FAM240AA0A1B0GVK7 77 aa13.72□□□□□ -0.21
SCARB1-201ENST00000261693 CCL24O00175 119 aa13.72□□□□□ -0.21
SCARB1-201ENST00000261693 GAGE7O76087 117 aa13.72□□□□□ -0.21
SCARB1-201ENST00000261693 GAGE12FP0CL80 117 aa13.72□□□□□ -0.21
SCARB1-201ENST00000261693 GAGE12GP0CL81 117 aa13.72□□□□□ -0.21
SCARB1-201ENST00000261693 GAGE12IP0CL82 117 aa13.72□□□□□ -0.21
SCARB1-201ENST00000261693 PLA2G2AP14555 144 aa13.72□□□□□ -0.21
SCARB1-201ENST00000261693 COPS9Q8WXC6 57 aa13.72□□□□□ -0.21
SCARB1-201ENST00000261693 TRGV2A0A075B6R0 118 aa13.71□□□□□ -0.21
SCARB1-201ENST00000261693 FAM218AQ96MZ4 157 aa13.71□□□□□ -0.21
SCARB1-201ENST00000261693 TMEM243Q9BU79 118 aa13.71□□□□□ -0.21
SCARB1-201ENST00000261693 TOMM7Q9P0U1 55 aa13.71□□□□□ -0.21
SCARB1-201ENST00000261693 MTORP42345 2549 aa13.71□□□□□ -0.21
SCARB1-201ENST00000261693 TRAV25A0A0B4J276 109 aa13.7□□□□□ -0.22
SCARB1-201ENST00000261693 GIG44P09565 113 aaPredicted RBP13.69□□□□□ -0.22
SCARB1-201ENST00000261693 RPL35AP18077 110 aaKnown RBP13.69□□□□□ -0.22
SCARB1-201ENST00000261693 ACANP16112 2415 aa13.69□□□□□ -0.22
SCARB1-201ENST00000261693 FN1P02751 2386 aaKnown RBP13.69□□□□□ -0.22
SCARB1-201ENST00000261693 HERV-K104P63124 156 aa13.69□□□□□ -0.22
SCARB1-201ENST00000261693 DNAJC9-AS1A6NH13 148 aa13.68□□□□□ -0.22
SCARB1-201ENST00000261693 BAALC-AS2P0C853 105 aa13.68□□□□□ -0.22
SCARB1-201ENST00000261693 MRPL23Q16540 153 aaKnown RBP13.68□□□□□ -0.22
SCARB1-201ENST00000261693 Q9HAA7 133 aa13.67□□□□□ -0.22
SCARB1-201ENST00000261693 MIR7-3HGQ8N6C7 128 aa13.67□□□□□ -0.22
SCARB1-201ENST00000261693 CHCHD5Q9BSY4 110 aa13.67□□□□□ -0.22
SCARB1-201ENST00000261693 PLAC8L1A1L4L8 177 aa13.66□□□□□ -0.22
SCARB1-201ENST00000261693 COX7B2Q8TF08 81 aa13.66□□□□□ -0.22
SCARB1-201ENST00000261693 BBC3Q96PG8 261 aaPredicted RBP13.66□□□□□ -0.22
SCARB1-201ENST00000261693 SMCR5Q8TEV8 140 aa13.65□□□□□ -0.22
SCARB1-201ENST00000261693 IGLV4-60A0A075B6I1 120 aa13.64□□□□□ -0.23
SCARB1-201ENST00000261693 TRACP01848 142 aa13.64□□□□□ -0.23
SCARB1-201ENST00000261693 LINC00337Q8N6G1 96 aa13.64□□□□□ -0.23
SCARB1-201ENST00000261693 ESM1Q9NQ30 184 aa13.64□□□□□ -0.23
SCARB1-201ENST00000261693 TRGV4A0A0C4DH28 118 aa13.64□□□□□ -0.23
SCARB1-201ENST00000261693 C22orf24Q9Y442 160 aa13.64□□□□□ -0.23
SCARB1-201ENST00000261693 HIST2H2BCQ6DN03 193 aa13.63□□□□□ -0.23
SCARB1-201ENST00000261693 CRPP02741 224 aa13.63□□□□□ -0.23
SCARB1-201ENST00000261693 IGKV2-28A0A075B6P5 120 aa13.62□□□□□ -0.23
SCARB1-201ENST00000261693 IGKV2D-28P01615 120 aa13.62□□□□□ -0.23
SCARB1-201ENST00000261693 LINC00158P58513 81 aa13.62□□□□□ -0.23
SCARB1-201ENST00000261693 KRTAP1-3Q8IUG1 177 aa13.62□□□□□ -0.23
SCARB1-201ENST00000261693 C16orf74Q96GX8 76 aa13.62□□□□□ -0.23
SCARB1-201ENST00000261693 SND1-IT1Q9HBX3 110 aa13.62□□□□□ -0.23
SCARB1-201ENST00000261693 GCN1Q92616 2671 aaKnown RBP13.62□□□□□ -0.23
SCARB1-201ENST00000261693 TRBV7-7A0A0K0K1E9 115 aa13.61□□□□□ -0.23
SCARB1-201ENST00000261693 NBEAL2Q6ZNJ1 2754 aa13.61□□□□□ -0.23
SCARB1-201ENST00000261693 TRAV13-2A0A0B4J235 113 aa13.6□□□□□ -0.23
SCARB1-201ENST00000261693 ACYP1P07311 99 aa13.6□□□□□ -0.23
SCARB1-201ENST00000261693 TMEM86BQ8N661 226 aa13.6□□□□□ -0.23
SCARB1-201ENST00000261693 WFDC11Q8NEX6 87 aa13.6□□□□□ -0.23
SCARB1-201ENST00000261693 TRBV6-4A0A1B0GX49 114 aa13.59□□□□□ -0.23
SCARB1-201ENST00000261693 PFN2P35080 140 aa13.59□□□□□ -0.23
SCARB1-201ENST00000261693 C5orf38Q86SI9 138 aa13.59□□□□□ -0.23
SCARB1-201ENST00000261693 FAM236AA0A1B0GUQ0 79 aa13.59□□□□□ -0.23
SCARB1-201ENST00000261693 FAM236BA0A1B0GV22 79 aa13.59□□□□□ -0.23
SCARB1-201ENST00000261693 RPL28P46779 137 aaKnown RBP13.59□□□□□ -0.23
SCARB1-201ENST00000261693 LRRC75A-AS1Q8N1F1 130 aa13.58□□□□□ -0.24
SCARB1-201ENST00000261693 C11orf68Q9H3H3 251 aaKnown RBP13.58□□□□□ -0.24
SCARB1-201ENST00000261693 A0A087WYN8 130 aa13.57□□□□□ -0.24
SCARB1-201ENST00000261693 TRBV6-8A0A0A6YYG3 113 aa13.57□□□□□ -0.24
SCARB1-201ENST00000261693 GAGE2AQ6NT46 116 aa13.57□□□□□ -0.24
SCARB1-201ENST00000261693 SMIM11BQ8TCY0 68 aa13.57□□□□□ -0.24
SCARB1-201ENST00000261693 CCL18P55774 89 aa13.57□□□□□ -0.24
SCARB1-201ENST00000261693 C3orf56Q8N813 242 aa13.57□□□□□ -0.24
SCARB1-201ENST00000261693 IGHV3OR16-9A0A0B4J2B5 98 aa13.56□□□□□ -0.24
SCARB1-201ENST00000261693 MALP21145 153 aa13.56□□□□□ -0.24
SCARB1-201ENST00000261693 CSNK1G2-AS1Q8NCQ2 148 aa13.56□□□□□ -0.24
SCARB1-201ENST00000261693 PF4P02776 101 aa13.56□□□□□ -0.24
SCARB1-201ENST00000261693 FHL2Q14192 279 aa13.56□□□□□ -0.24
SCARB1-201ENST00000261693 C19orf73Q9NVV2 129 aa13.55□□□□□ -0.24
SCARB1-201ENST00000261693 ATP5G1P05496 136 aa13.54□□□□□ -0.24
SCARB1-201ENST00000261693 DEFB130BP0DP73 79 aa13.54□□□□□ -0.24
SCARB1-201ENST00000261693 DEFB130AP0DP74 79 aa13.54□□□□□ -0.24
SCARB1-201ENST00000261693 FAM222AQ5U5X8 452 aa13.54□□□□□ -0.24
SCARB1-201ENST00000261693 C9orf129Q5T035 196 aaKnown RBP13.54□□□□□ -0.24
SCARB1-201ENST00000261693 LINC00643Q86TS7 51 aa13.54□□□□□ -0.24
SCARB1-201ENST00000261693 LINC01006Q8NI28 216 aa13.54□□□□□ -0.24
SCARB1-201ENST00000261693 OVOL2Q9BRP0 275 aa13.54□□□□□ -0.24
SCARB1-201ENST00000261693 ZNF843Q8N446 348 aa13.53□□□□□ -0.24
SCARB1-201ENST00000261693 DNAL4O96015 105 aa13.53□□□□□ -0.24
SCARB1-201ENST00000261693 PPDPFQ9H3Y8 114 aa13.53□□□□□ -0.24
SCARB1-201ENST00000261693 PAX4O43316 350 aa13.52□□□□□ -0.24
SCARB1-201ENST00000261693 A0A087WZ39 114 aa13.51□□□□□ -0.25
SCARB1-201ENST00000261693 OR13C6PQ8NH95 151 aa13.51□□□□□ -0.25
SCARB1-201ENST00000261693 IGLV1-51P01701 117 aa13.51□□□□□ -0.25
SCARB1-201ENST00000261693 INAFM2P0DMQ5 153 aa13.51□□□□□ -0.25
SCARB1-201ENST00000261693 XCL1P47992 114 aa13.5□□□□□ -0.25
SCARB1-201ENST00000261693 CMC4P56277 68 aaPredicted RBP13.5□□□□□ -0.25
SCARB1-201ENST00000261693 IMUPQ9GZP8 106 aa13.5□□□□□ -0.25
SCARB1-201ENST00000261693 IBA57-AS1B1ANH7 110 aa13.49□□□□□ -0.25
SCARB1-201ENST00000261693 CLPSL2Q6UWE3 100 aa13.49□□□□□ -0.25
SCARB1-201ENST00000261693 C14orf132Q9NPU4 83 aa13.49□□□□□ -0.25
SCARB1-201ENST00000261693 LINC00959A0A1B0GUT2 108 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 1050.2 ms