RNA–Protein interactions for RNA: ENST00000261674.8

SFSWAP-201, Transcript of splicing factor SWAP, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,246 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-201ENST00000261674 NOP10Q9NPE3 64 aaKnown RBP10.39□□□□□ -0.75
SFSWAP-201ENST00000261674 SS18L2Q9UHA2 77 aa10.39□□□□□ -0.75
SFSWAP-201ENST00000261674 RPL36AP83881 106 aaKnown RBP10.39□□□□□ -0.75
SFSWAP-201ENST00000261674 LINC00242Q5T6M2 205 aa10.39□□□□□ -0.75
SFSWAP-201ENST00000261674 RPL36ALQ969Q0 106 aaKnown RBP10.39□□□□□ -0.75
SFSWAP-201ENST00000261674 ODF3L2Q3SX64 289 aa10.38□□□□□ -0.75
SFSWAP-201ENST00000261674 PIK3CD-AS1Q5SR53 167 aa10.38□□□□□ -0.75
SFSWAP-201ENST00000261674 LINC00308Q8TCZ7 52 aa10.38□□□□□ -0.75
SFSWAP-201ENST00000261674 CITED2Q99967 270 aaPredicted RBP10.38□□□□□ -0.75
SFSWAP-201ENST00000261674 TRGV2A0A075B6R0 118 aa10.37□□□□□ -0.75
SFSWAP-201ENST00000261674 RPL35AP18077 110 aaKnown RBP10.37□□□□□ -0.75
SFSWAP-201ENST00000261674 UBE2L6O14933 153 aa10.37□□□□□ -0.75
SFSWAP-201ENST00000261674 LINC01006Q8NI28 216 aa10.37□□□□□ -0.75
SFSWAP-201ENST00000261674 WFDC10AQ9H1F0 79 aa10.37□□□□□ -0.75
SFSWAP-201ENST00000261674 GAGE7O76087 117 aa10.37□□□□□ -0.75
SFSWAP-201ENST00000261674 GAGE12FP0CL80 117 aa10.37□□□□□ -0.75
SFSWAP-201ENST00000261674 GAGE12GP0CL81 117 aa10.37□□□□□ -0.75
SFSWAP-201ENST00000261674 GAGE12IP0CL82 117 aa10.37□□□□□ -0.75
SFSWAP-201ENST00000261674 Q8N2B8 174 aa10.37□□□□□ -0.75
SFSWAP-201ENST00000261674 LST1O00453 97 aa10.36□□□□□ -0.75
SFSWAP-201ENST00000261674 RS1O15537 224 aa10.36□□□□□ -0.75
SFSWAP-201ENST00000261674 HERVK_113P63121 156 aa10.36□□□□□ -0.75
SFSWAP-201ENST00000261674 C1orf158Q8N1D5 194 aa10.36□□□□□ -0.75
SFSWAP-201ENST00000261674 NDUFA1O15239 70 aa10.36□□□□□ -0.75
SFSWAP-201ENST00000261674 DNAJC30Q96LL9 226 aa10.36□□□□□ -0.75
SFSWAP-201ENST00000261674 LOC100131303A0A0U1RQF7 123 aa10.35□□□□□ -0.75
SFSWAP-201ENST00000261674 CITED1Q99966 193 aa10.35□□□□□ -0.75
SFSWAP-201ENST00000261674 NDUFV3P56181 108 aaKnown RBP10.35□□□□□ -0.75
SFSWAP-201ENST00000261674 NTM-AS1Q6ZSK4 140 aa10.35□□□□□ -0.75
SFSWAP-201ENST00000261674 IFITM1P13164 125 aa10.35□□□□□ -0.75
SFSWAP-201ENST00000261674 C4orf3Q8WVX3 66 aa10.35□□□□□ -0.75
SFSWAP-201ENST00000261674 SOSTDC1Q6X4U4 206 aa10.34□□□□□ -0.75
SFSWAP-201ENST00000261674 TIRAPP58753 221 aa10.34□□□□□ -0.75
SFSWAP-201ENST00000261674 H3BT86 120 aa10.33□□□□□ -0.76
SFSWAP-201ENST00000261674 BEAN1Q3B7T3 259 aa10.33□□□□□ -0.76
SFSWAP-201ENST00000261674 EDA2RQ9HAV5 297 aa10.33□□□□□ -0.76
SFSWAP-201ENST00000261674 SMIM1B2RUZ4 78 aa10.33□□□□□ -0.76
SFSWAP-201ENST00000261674 GAGE6Q13070 117 aa10.33□□□□□ -0.76
SFSWAP-201ENST00000261674 C3orf56Q8N813 242 aa10.33□□□□□ -0.76
SFSWAP-201ENST00000261674 C11orf68Q9H3H3 251 aaKnown RBP10.33□□□□□ -0.76
SFSWAP-201ENST00000261674 K7EQD1 137 aa10.33□□□□□ -0.76
SFSWAP-201ENST00000261674 RNF152Q8N8N0 203 aa10.33□□□□□ -0.76
SFSWAP-201ENST00000261674 CCDC179H3BU77 68 aa10.32□□□□□ -0.76
SFSWAP-201ENST00000261674 HILS1P60008 231 aa10.32□□□□□ -0.76
SFSWAP-201ENST00000261674 NHLRC4P0CG21 123 aaPredicted RBP10.32□□□□□ -0.76
SFSWAP-201ENST00000261674 Q9HAA7 133 aa10.32□□□□□ -0.76
SFSWAP-201ENST00000261674 CCL24O00175 119 aa10.31□□□□□ -0.76
SFSWAP-201ENST00000261674 NOTCH1P46531 2555 aa10.3□□□□□ -0.76
SFSWAP-201ENST00000261674 TRGV4A0A0C4DH28 118 aa10.3□□□□□ -0.76
SFSWAP-201ENST00000261674 LINC00158P58513 81 aa10.3□□□□□ -0.76
SFSWAP-201ENST00000261674 M0QXV9 152 aa10.3□□□□□ -0.76
SFSWAP-201ENST00000261674 PFN2P35080 140 aa10.3□□□□□ -0.76
SFSWAP-201ENST00000261674 PKD1L1Q8TDX9 2849 aa10.3□□□□□ -0.76
SFSWAP-201ENST00000261674 CHCHD5Q9BSY4 110 aa10.29□□□□□ -0.76
SFSWAP-201ENST00000261674 TMEM243Q9BU79 118 aa10.29□□□□□ -0.76
SFSWAP-201ENST00000261674 CDC42SE2Q9NRR3 84 aa10.29□□□□□ -0.76
SFSWAP-201ENST00000261674 A8MTW9 85 aa10.29□□□□□ -0.76
SFSWAP-201ENST00000261674 TIMM17BO60830 172 aa10.29□□□□□ -0.76
SFSWAP-201ENST00000261674 BAALC-AS2P0C853 105 aa10.29□□□□□ -0.76
SFSWAP-201ENST00000261674 KRTAP10-3P60369 221 aa10.28□□□□□ -0.76
SFSWAP-201ENST00000261674 C5orf38Q86SI9 138 aa10.28□□□□□ -0.76
SFSWAP-201ENST00000261674 IGLV5-39A0A0G2JS06 123 aa10.28□□□□□ -0.76
SFSWAP-201ENST00000261674 COX7A2LO14548 114 aa10.28□□□□□ -0.76
SFSWAP-201ENST00000261674 RNASE1P07998 156 aaKnown RBP10.28□□□□□ -0.76
SFSWAP-201ENST00000261674 DAZ2Q13117 558 aaKnown RBP10.28□□□□□ -0.76
SFSWAP-201ENST00000261674 DAZ4Q86SG3 579 aaKnown RBP10.28□□□□□ -0.76
SFSWAP-201ENST00000261674 MIR7-3HGQ8N6C7 128 aa10.28□□□□□ -0.76
SFSWAP-201ENST00000261674 SPATA3Q8NHX4 192 aa10.28□□□□□ -0.76
SFSWAP-201ENST00000261674 DAZ3Q9NR90 486 aaKnown RBP10.28□□□□□ -0.76
SFSWAP-201ENST00000261674 IGLV5-45A0A087WSX0 123 aa10.28□□□□□ -0.76
SFSWAP-201ENST00000261674 DEFB130BP0DP73 79 aa10.27□□□□□ -0.77
SFSWAP-201ENST00000261674 DEFB130AP0DP74 79 aa10.27□□□□□ -0.77
SFSWAP-201ENST00000261674 OR13C6PQ8NH95 151 aa10.27□□□□□ -0.77
SFSWAP-201ENST00000261674 FAM218AQ96MZ4 157 aa10.26□□□□□ -0.77
SFSWAP-201ENST00000261674 A0A096LPF7 62 aa10.25□□□□□ -0.77
SFSWAP-201ENST00000261674 CRPP02741 224 aa10.25□□□□□ -0.77
SFSWAP-201ENST00000261674 CLPSL2Q6UWE3 100 aa10.25□□□□□ -0.77
SFSWAP-201ENST00000261674 TRBV10-1A0A0K0K1A3 114 aa10.24□□□□□ -0.77
SFSWAP-201ENST00000261674 GAGE2AQ6NT46 116 aa10.24□□□□□ -0.77
SFSWAP-201ENST00000261674 SND1-IT1Q9HBX3 110 aa10.24□□□□□ -0.77
SFSWAP-201ENST00000261674 IGLV4-60A0A075B6I1 120 aa10.24□□□□□ -0.77
SFSWAP-201ENST00000261674 ATP5G1P05496 136 aa10.24□□□□□ -0.77
SFSWAP-201ENST00000261674 COPS9Q8WXC6 57 aa10.24□□□□□ -0.77
SFSWAP-201ENST00000261674 F5H768 121 aa10.23□□□□□ -0.77
SFSWAP-201ENST00000261674 PAX4O43316 350 aa10.23□□□□□ -0.77
SFSWAP-201ENST00000261674 COX7B2Q8TF08 81 aa10.23□□□□□ -0.77
SFSWAP-201ENST00000261674 DNAL4O96015 105 aa10.22□□□□□ -0.77
SFSWAP-201ENST00000261674 TMEM86BQ8N661 226 aa10.22□□□□□ -0.77
SFSWAP-201ENST00000261674 FAM236AA0A1B0GUQ0 79 aa10.22□□□□□ -0.77
SFSWAP-201ENST00000261674 FAM236BA0A1B0GV22 79 aa10.22□□□□□ -0.77
SFSWAP-201ENST00000261674 MGAM2Q2M2H8 2515 aa10.21□□□□□ -0.78
SFSWAP-201ENST00000261674 SHISA2Q6UWI4 295 aa10.21□□□□□ -0.78
SFSWAP-201ENST00000261674 LINC00337Q8N6G1 96 aa10.21□□□□□ -0.78
SFSWAP-201ENST00000261674 PF4P02776 101 aa10.2□□□□□ -0.78
SFSWAP-201ENST00000261674 HERV-K104P63124 156 aa10.2□□□□□ -0.78
SFSWAP-201ENST00000261674 XCL1P47992 114 aa10.2□□□□□ -0.78
SFSWAP-201ENST00000261674 C6orf226Q5I0X4 101 aa10.2□□□□□ -0.78
SFSWAP-201ENST00000261674 CSDC2Q9Y534 153 aaKnown RBP10.2□□□□□ -0.78
SFSWAP-201ENST00000261674 GIG44P09565 113 aaPredicted RBP10.19□□□□□ -0.78
SFSWAP-201ENST00000261674 TRAV25A0A0B4J276 109 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms