RNA–Protein interactions for RNA: ENST00000259008.6

BRIP1-201, Transcript of BRCA1 interacting protein C-terminal helicase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BRIP1, Length 6,048 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIP1-201ENST00000259008 ZNF706Q9Y5V0 76 aaPredicted RBP4.55□□□□□ -1.68
BRIP1-201ENST00000259008 KRTAP10-11P60412 298 aa4.55□□□□□ -1.68
BRIP1-201ENST00000259008 LOC105371267A0A1B0GV96 52 aa4.55□□□□□ -1.68
BRIP1-201ENST00000259008 PYY3Q5JQD4 70 aa4.55□□□□□ -1.68
BRIP1-201ENST00000259008 CEP295Q9C0D2 2601 aa4.55□□□□□ -1.68
BRIP1-201ENST00000259008 C10orf91Q5T1B1 145 aa4.54□□□□□ -1.68
BRIP1-201ENST00000259008 TLN1Q9Y490 2541 aaKnown RBP4.54□□□□□ -1.68
BRIP1-201ENST00000259008 LRRK2Q5S007 2527 aa4.54□□□□□ -1.68
BRIP1-201ENST00000259008 PIK3CD-AS1Q5SR53 167 aa4.54□□□□□ -1.68
BRIP1-201ENST00000259008 NUPR1O60356 82 aa4.54□□□□□ -1.68
BRIP1-201ENST00000259008 CIRBP-AS1Q8TBR5 109 aa4.54□□□□□ -1.68
BRIP1-201ENST00000259008 CLEC2BQ92478 149 aa4.54□□□□□ -1.68
BRIP1-201ENST00000259008 RNF185Q96GF1 192 aa4.54□□□□□ -1.68
BRIP1-201ENST00000259008 MLST8Q9BVC4 326 aa4.54□□□□□ -1.68
BRIP1-201ENST00000259008 NREPQ16612 68 aa4.53□□□□□ -1.68
BRIP1-201ENST00000259008 CYSRT1A8MQ03 144 aa4.53□□□□□ -1.68
BRIP1-201ENST00000259008 H0YGX0 51 aa4.53□□□□□ -1.68
BRIP1-201ENST00000259008 COX6A2Q02221 97 aa4.53□□□□□ -1.68
BRIP1-201ENST00000259008 CFAP47Q6ZTR5 3102 aa4.53□□□□□ -1.68
BRIP1-201ENST00000259008 TRBV20-1A0A075B6N2 111 aa4.53□□□□□ -1.68
BRIP1-201ENST00000259008 FAM229AH3BQW9 127 aa4.53□□□□□ -1.68
BRIP1-201ENST00000259008 ANKRD39Q53RE8 183 aa4.53□□□□□ -1.68
BRIP1-201ENST00000259008 K7EIL1 84 aa4.53□□□□□ -1.68
BRIP1-201ENST00000259008 C21orf62-AS1Q17RA5 79 aa4.53□□□□□ -1.68
BRIP1-201ENST00000259008 E9PLD3 99 aa4.52□□□□□ -1.69
BRIP1-201ENST00000259008 KRTAP10-3P60369 221 aa4.52□□□□□ -1.69
BRIP1-201ENST00000259008 C9orf116Q5BN46 136 aaPredicted RBP4.52□□□□□ -1.69
BRIP1-201ENST00000259008 IGLV4-60A0A075B6I1 120 aa4.52□□□□□ -1.69
BRIP1-201ENST00000259008 TDRG1Q3Y452 100 aa4.52□□□□□ -1.69
BRIP1-201ENST00000259008 FREM2Q5SZK8 3169 aa4.52□□□□□ -1.69
BRIP1-201ENST00000259008 TRAV23DV6A0A075B6W5 121 aa4.52□□□□□ -1.69
BRIP1-201ENST00000259008 J3QL48 77 aa4.52□□□□□ -1.69
BRIP1-201ENST00000259008 Q6ZSN1 163 aa4.52□□□□□ -1.69
BRIP1-201ENST00000259008 A0A0J9YXY3 114 aa4.52□□□□□ -1.69
BRIP1-201ENST00000259008 Q6ZVH6 145 aa4.52□□□□□ -1.69
BRIP1-201ENST00000259008 H3BMG7 143 aa4.51□□□□□ -1.69
BRIP1-201ENST00000259008 RPL28P46779 137 aaKnown RBP4.51□□□□□ -1.69
BRIP1-201ENST00000259008 ESRGQ1W209 222 aa4.51□□□□□ -1.69
BRIP1-201ENST00000259008 TMEM223A0PJW6 202 aa4.51□□□□□ -1.69
BRIP1-201ENST00000259008 MRPS12O15235 138 aaKnown RBP4.51□□□□□ -1.69
BRIP1-201ENST00000259008 C9orf118A6NHY6 69 aa4.51□□□□□ -1.69
BRIP1-201ENST00000259008 GAS8-AS1O95177 125 aa4.51□□□□□ -1.69
BRIP1-201ENST00000259008 SLPIP03973 132 aa4.51□□□□□ -1.69
BRIP1-201ENST00000259008 ZNF22P17026 224 aaPredicted RBP4.51□□□□□ -1.69
BRIP1-201ENST00000259008 UNQ6190/PRO20217Q6UXQ8 127 aa4.51□□□□□ -1.69
BRIP1-201ENST00000259008 JMJD1CQ15652 2540 aa4.51□□□□□ -1.69
BRIP1-201ENST00000259008 A0A1B0GXF2 115 aa4.51□□□□□ -1.69
BRIP1-201ENST00000259008 CHKB-CPT1BH3BT56 60 aa4.51□□□□□ -1.69
BRIP1-201ENST00000259008 LINC01545Q5VT33 79 aa4.51□□□□□ -1.69
BRIP1-201ENST00000259008 M0R378 163 aa4.5□□□□□ -1.69
BRIP1-201ENST00000259008 LINC00694P0DN24 101 aa4.5□□□□□ -1.69
BRIP1-201ENST00000259008 SPATA12Q7Z6I5 190 aa4.5□□□□□ -1.69
BRIP1-201ENST00000259008 CDC42SE2Q9NRR3 84 aa4.5□□□□□ -1.69
BRIP1-201ENST00000259008 TRBV27A0A0K0K1C4 114 aa4.5□□□□□ -1.69
BRIP1-201ENST00000259008 IBA57-AS1B1ANH7 110 aa4.5□□□□□ -1.69
BRIP1-201ENST00000259008 ANAPC13Q9BS18 74 aa4.5□□□□□ -1.69
BRIP1-201ENST00000259008 SPANXCQ9NY87 97 aa4.5□□□□□ -1.69
BRIP1-201ENST00000259008 SPANXB1Q9NS25 103 aaPredicted RBP4.5□□□□□ -1.69
BRIP1-201ENST00000259008 DSCAML1Q8TD84 2053 aa4.5□□□□□ -1.69
BRIP1-201ENST00000259008 RBM3P98179 157 aaKnown RBP4.5□□□□□ -1.69
BRIP1-201ENST00000259008 NTN5Q8WTR8 489 aaPredicted RBP4.5□□□□□ -1.69
BRIP1-201ENST00000259008 C3orf84H3BNL1 204 aa4.49□□□□□ -1.69
BRIP1-201ENST00000259008 IGKV4-1P06312 121 aa4.49□□□□□ -1.69
BRIP1-201ENST00000259008 TRBV10-2A0A0K0K1G8 114 aa4.49□□□□□ -1.69
BRIP1-201ENST00000259008 LINC00315P59091 139 aa4.49□□□□□ -1.69
BRIP1-201ENST00000259008 KRTAP1-3Q8IUG1 177 aa4.49□□□□□ -1.69
BRIP1-201ENST00000259008 SORL1Q92673 2214 aa4.49□□□□□ -1.69
BRIP1-201ENST00000259008 REG3GQ6UW15 175 aa4.49□□□□□ -1.69
BRIP1-201ENST00000259008 LOC400499M0QZD8 3231 aa4.49□□□□□ -1.69
BRIP1-201ENST00000259008 NRACQ8N912 160 aa4.49□□□□□ -1.69
BRIP1-201ENST00000259008 TRBV6-5A0A0K0K1A5 114 aa4.48□□□□□ -1.69
BRIP1-201ENST00000259008 A0A1W2PPM0 123 aa4.48□□□□□ -1.69
BRIP1-201ENST00000259008 SPANXDQ9BXN6 97 aa4.48□□□□□ -1.69
BRIP1-201ENST00000259008 PKD1L2Q7Z442 2459 aa4.48□□□□□ -1.69
BRIP1-201ENST00000259008 NBDYA0A0U1RRE5 68 aa4.48□□□□□ -1.69
BRIP1-201ENST00000259008 H3BQ85 93 aa4.48□□□□□ -1.69
BRIP1-201ENST00000259008 RTL8CO15255 209 aa4.48□□□□□ -1.69
BRIP1-201ENST00000259008 ASPMQ8IZT6 3477 aa4.48□□□□□ -1.69
BRIP1-201ENST00000259008 TMEM256-PLSCR3K7ERE1 68 aa4.48□□□□□ -1.69
BRIP1-201ENST00000259008 C6orf99Q4VX62 202 aa4.48□□□□□ -1.69
BRIP1-201ENST00000259008 CHCHD7Q9BUK0 85 aa4.48□□□□□ -1.69
BRIP1-201ENST00000259008 ZFHX4Q86UP3 3567 aa4.48□□□□□ -1.69
BRIP1-201ENST00000259008 LINC01620Q4KN68 170 aa4.48□□□□□ -1.69
BRIP1-201ENST00000259008 A0A096LNT2 108 aa4.47□□□□□ -1.69
BRIP1-201ENST00000259008 X6R8D5 127 aa4.47□□□□□ -1.69
BRIP1-201ENST00000259008 FRYQ5TBA9 3013 aa4.47□□□□□ -1.69
BRIP1-201ENST00000259008 ZFYVE26Q68DK2 2539 aa4.47□□□□□ -1.69
BRIP1-201ENST00000259008 C14orf132Q9NPU4 83 aa4.47□□□□□ -1.69
BRIP1-201ENST00000259008 PYGO1Q9Y3Y4 419 aa4.47□□□□□ -1.69
BRIP1-201ENST00000259008 CELSR3Q9NYQ7 3312 aa4.47□□□□□ -1.69
BRIP1-201ENST00000259008 FASNP49327 2511 aaKnown RBP4.47□□□□□ -1.69
BRIP1-201ENST00000259008 SPENQ96T58 3664 aaKnown RBP4.47□□□□□ -1.69
BRIP1-201ENST00000259008 TRBV30A0A0K0K1B3 111 aa4.47□□□□□ -1.69
BRIP1-201ENST00000259008 LINC00308Q8TCZ7 52 aa4.47□□□□□ -1.69
BRIP1-201ENST00000259008 IGKV3D-7A0A0C4DH55 119 aa4.46□□□□□ -1.69
BRIP1-201ENST00000259008 FXYD2P54710 66 aa4.46□□□□□ -1.69
BRIP1-201ENST00000259008 Q8IZM0 81 aa4.46□□□□□ -1.69
BRIP1-201ENST00000259008 DHRS4-AS1Q9P1J3 65 aa4.46□□□□□ -1.69
BRIP1-201ENST00000259008 ANKRD17O75179 2603 aaKnown RBP4.46□□□□□ -1.69
BRIP1-201ENST00000259008 DMXL1Q9Y485 3027 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms