RNA–Protein interactions for RNA: ENST00000257548.9

USP30-201, Transcript of ubiquitin specific peptidase 30, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP30, Length 3,742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-201ENST00000257548 SPANXCQ9NY87 97 aa9□□□□□ -0.97
USP30-201ENST00000257548 UBE2D4Q9Y2X8 147 aa9□□□□□ -0.97
USP30-201ENST00000257548 K7ENP7 123 aa9□□□□□ -0.97
USP30-201ENST00000257548 DEFB112Q30KQ8 113 aa9□□□□□ -0.97
USP30-201ENST00000257548 C5orf47Q569G3 176 aa9□□□□□ -0.97
USP30-201ENST00000257548 C9orf85Q96MD7 179 aa9□□□□□ -0.97
USP30-201ENST00000257548 CSDC2Q9Y534 153 aaKnown RBP9□□□□□ -0.97
USP30-201ENST00000257548 NF1P21359 2839 aa8.99□□□□□ -0.97
USP30-201ENST00000257548 GHRHP01286 108 aa8.99□□□□□ -0.97
USP30-201ENST00000257548 TMEM243Q9BU79 118 aa8.99□□□□□ -0.97
USP30-201ENST00000257548 SMIM9A6NGZ8 99 aa8.99□□□□□ -0.97
USP30-201ENST00000257548 MSMBP08118 114 aa8.99□□□□□ -0.97
USP30-201ENST00000257548 KIR2DL5BQ8NHK3 375 aa8.99□□□□□ -0.97
USP30-201ENST00000257548 FAM240AA0A1B0GVK7 77 aa8.98□□□□□ -0.97
USP30-201ENST00000257548 RBMY1FQ15415 496 aaKnown RBP8.98□□□□□ -0.97
USP30-201ENST00000257548 USP17L23D6RBM5 183 aa8.98□□□□□ -0.97
USP30-201ENST00000257548 FBN2P35556 2912 aa8.98□□□□□ -0.97
USP30-201ENST00000257548 NDUFA1O15239 70 aa8.98□□□□□ -0.97
USP30-201ENST00000257548 UBL5Q9BZL1 73 aa8.98□□□□□ -0.97
USP30-201ENST00000257548 K7EQG2 157 aa8.97□□□□□ -0.97
USP30-201ENST00000257548 NBL1P41271 181 aa8.97□□□□□ -0.97
USP30-201ENST00000257548 SMCR5Q8TEV8 140 aa8.97□□□□□ -0.97
USP30-201ENST00000257548 CITED2Q99967 270 aaPredicted RBP8.97□□□□□ -0.97
USP30-201ENST00000257548 IGHV4-30-2A0A087WSY4 118 aa8.97□□□□□ -0.97
USP30-201ENST00000257548 IGLV10-54A0A075B6I4 117 aa8.96□□□□□ -0.97
USP30-201ENST00000257548 ENHOQ6UWT2 76 aa8.96□□□□□ -0.97
USP30-201ENST00000257548 LINC00526Q96FQ7 95 aa8.96□□□□□ -0.97
USP30-201ENST00000257548 IMUPQ9GZP8 106 aa8.96□□□□□ -0.97
USP30-201ENST00000257548 GNLYP22749 145 aa8.96□□□□□ -0.97
USP30-201ENST00000257548 LINC00242Q5T6M2 205 aa8.96□□□□□ -0.97
USP30-201ENST00000257548 Q6ZTI0 123 aa8.96□□□□□ -0.97
USP30-201ENST00000257548 ORMDL1Q9P0S3 153 aa8.96□□□□□ -0.97
USP30-201ENST00000257548 PYGO1Q9Y3Y4 419 aa8.96□□□□□ -0.97
USP30-201ENST00000257548 FAM218AQ96MZ4 157 aa8.96□□□□□ -0.98
USP30-201ENST00000257548 CHD6Q8TD26 2715 aa8.96□□□□□ -0.98
USP30-201ENST00000257548 HTN3P15516 51 aa8.95□□□□□ -0.98
USP30-201ENST00000257548 RPL18AQ02543 176 aaKnown RBP8.95□□□□□ -0.98
USP30-201ENST00000257548 ANKRD17O75179 2603 aaKnown RBP8.95□□□□□ -0.98
USP30-201ENST00000257548 A0A087WYN8 130 aa8.95□□□□□ -0.98
USP30-201ENST00000257548 TRBV7-7A0A0K0K1E9 115 aa8.95□□□□□ -0.98
USP30-201ENST00000257548 COX7B2Q8TF08 81 aa8.95□□□□□ -0.98
USP30-201ENST00000257548 NIPBLQ6KC79 2804 aaeCLIP8.95□□□□□ -0.98
USP30-201ENST00000257548 RBM3P98179 157 aaKnown RBP8.95□□□□□ -0.98
USP30-201ENST00000257548 SMIM11BQ8TCY0 68 aa8.95□□□□□ -0.98
USP30-201ENST00000257548 MXRA5Q9NR99 2828 aa8.94□□□□□ -0.98
USP30-201ENST00000257548 CXCL5P42830 114 aa8.94□□□□□ -0.98
USP30-201ENST00000257548 LITAFQ99732 161 aa8.94□□□□□ -0.98
USP30-201ENST00000257548 B4DSR2 109 aa8.94□□□□□ -0.98
USP30-201ENST00000257548 HILS1P60008 231 aa8.94□□□□□ -0.98
USP30-201ENST00000257548 LINC00846Q9NV44 126 aa8.94□□□□□ -0.98
USP30-201ENST00000257548 K7EMT4 169 aa8.94□□□□□ -0.98
USP30-201ENST00000257548 SOSTDC1Q6X4U4 206 aa8.94□□□□□ -0.98
USP30-201ENST00000257548 OVOL2Q9BRP0 275 aa8.94□□□□□ -0.98
USP30-201ENST00000257548 CHCHD7Q9BUK0 85 aa8.94□□□□□ -0.98
USP30-201ENST00000257548 C11orf71Q6IPW1 123 aa8.93□□□□□ -0.98
USP30-201ENST00000257548 ESM1Q9NQ30 184 aa8.93□□□□□ -0.98
USP30-201ENST00000257548 PKIGQ9Y2B9 76 aa8.93□□□□□ -0.98
USP30-201ENST00000257548 NBEAL2Q6ZNJ1 2754 aa8.93□□□□□ -0.98
USP30-201ENST00000257548 DOPEY1Q5JWR5 2465 aa8.93□□□□□ -0.98
USP30-201ENST00000257548 C18orf65Q6ZTR6 163 aa8.93□□□□□ -0.98
USP30-201ENST00000257548 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.93□□□□□ -0.98
USP30-201ENST00000257548 SERP2Q8N6R1 65 aa8.93□□□□□ -0.98
USP30-201ENST00000257548 BRI3O95415 125 aa8.92□□□□□ -0.98
USP30-201ENST00000257548 PRR3P79522 188 aaKnown RBP8.92□□□□□ -0.98
USP30-201ENST00000257548 SCXQ7RTU7 201 aa8.92□□□□□ -0.98
USP30-201ENST00000257548 H3BUA1 57 aa8.92□□□□□ -0.98
USP30-201ENST00000257548 SNURFQ9Y675 71 aa8.92□□□□□ -0.98
USP30-201ENST00000257548 TEX15Q9BXT5 2789 aa8.92□□□□□ -0.98
USP30-201ENST00000257548 LOC100131303A0A0U1RQF7 123 aa8.92□□□□□ -0.98
USP30-201ENST00000257548 SMIM1B2RUZ4 78 aa8.92□□□□□ -0.98
USP30-201ENST00000257548 A6NDX4 124 aa8.91□□□□□ -0.98
USP30-201ENST00000257548 PRB2P02812 416 aaPredicted RBP8.91□□□□□ -0.98
USP30-201ENST00000257548 H0YGX0 51 aa8.91□□□□□ -0.98
USP30-201ENST00000257548 C19orf84I3L1E1 186 aa8.9□□□□□ -0.98
USP30-201ENST00000257548 DAD1P61803 113 aa8.9□□□□□ -0.98
USP30-201ENST00000257548 C4orf26Q17RF5 130 aa8.9□□□□□ -0.98
USP30-201ENST00000257548 WFDC11Q8NEX6 87 aa8.9□□□□□ -0.98
USP30-201ENST00000257548 MRAPQ8TCY5 172 aa8.9□□□□□ -0.98
USP30-201ENST00000257548 F5H768 121 aa8.9□□□□□ -0.99
USP30-201ENST00000257548 K7EQD1 137 aa8.9□□□□□ -0.99
USP30-201ENST00000257548 PSMB8P28062 276 aa8.9□□□□□ -0.99
USP30-201ENST00000257548 FAM19A1Q7Z5A9 133 aa8.9□□□□□ -0.99
USP30-201ENST00000257548 LINC00337Q8N6G1 96 aa8.9□□□□□ -0.99
USP30-201ENST00000257548 AVPP01185 164 aa8.89□□□□□ -0.99
USP30-201ENST00000257548 A0A0U1RQV1 116 aa8.89□□□□□ -0.99
USP30-201ENST00000257548 LRRC75A-AS1Q8N1F1 130 aa8.88□□□□□ -0.99
USP30-201ENST00000257548 UPK3BQ9BT76 320 aa8.88□□□□□ -0.99
USP30-201ENST00000257548 TIMM17BO60830 172 aa8.88□□□□□ -0.99
USP30-201ENST00000257548 UCNP55089 124 aa8.88□□□□□ -0.99
USP30-201ENST00000257548 CCL18P55774 89 aa8.88□□□□□ -0.99
USP30-201ENST00000257548 FBXL19-AS1Q494R0 122 aa8.88□□□□□ -0.99
USP30-201ENST00000257548 FAM19A4Q96LR4 140 aa8.88□□□□□ -0.99
USP30-201ENST00000257548 USP24Q9UPU5 2620 aa8.86□□□□□ -0.99
USP30-201ENST00000257548 SS18Q15532 418 aa8.86□□□□□ -0.99
USP30-201ENST00000257548 MAP6D1Q9H9H5 199 aa8.86□□□□□ -0.99
USP30-201ENST00000257548 TMEM258P61165 79 aa8.85□□□□□ -0.99
USP30-201ENST00000257548 GCN1Q92616 2671 aaKnown RBP8.85□□□□□ -0.99
USP30-201ENST00000257548 BRK1Q8WUW1 75 aa8.85□□□□□ -0.99
USP30-201ENST00000257548 C9orf129Q5T035 196 aaKnown RBP8.85□□□□□ -0.99
USP30-201ENST00000257548 MPLKIPQ8TAP9 179 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 126.5 ms