RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 ATP5EP2Q5VTU8 51 aa9.53□□□□□ -0.88
PRPF38A-201ENST00000257181 LINC00308Q8TCZ7 52 aa9.53□□□□□ -0.88
PRPF38A-201ENST00000257181 CYSRT1A8MQ03 144 aa9.53□□□□□ -0.88
PRPF38A-201ENST00000257181 C19orf73Q9NVV2 129 aa9.52□□□□□ -0.88
PRPF38A-201ENST00000257181 IGF2RP11717 2491 aa9.52□□□□□ -0.88
PRPF38A-201ENST00000257181 NAA38Q9BRA0 125 aaKnown RBP9.52□□□□□ -0.89
PRPF38A-201ENST00000257181 EDN2P20800 178 aa9.51□□□□□ -0.89
PRPF38A-201ENST00000257181 ANAPC13Q9BS18 74 aa9.51□□□□□ -0.89
PRPF38A-201ENST00000257181 C11orf21Q9P2W6 132 aa9.51□□□□□ -0.89
PRPF38A-201ENST00000257181 NDUFC2O95298 119 aa9.5□□□□□ -0.89
PRPF38A-201ENST00000257181 PTPN13Q12923 2485 aa9.5□□□□□ -0.89
PRPF38A-201ENST00000257181 TP73-AS1Q9UF72 201 aa9.5□□□□□ -0.89
PRPF38A-201ENST00000257181 ZNF73O43830 326 aaPredicted RBP9.49□□□□□ -0.89
PRPF38A-201ENST00000257181 PCP2Q8IVA1 136 aa9.49□□□□□ -0.89
PRPF38A-201ENST00000257181 SHANK1Q9Y566 2161 aa9.49□□□□□ -0.89
PRPF38A-201ENST00000257181 C16orf90A8MZG2 172 aa9.49□□□□□ -0.89
PRPF38A-201ENST00000257181 SEC61GP60059 68 aa9.49□□□□□ -0.89
PRPF38A-201ENST00000257181 H3BMG7 143 aa9.48□□□□□ -0.89
PRPF38A-201ENST00000257181 X6R8D5 127 aa9.48□□□□□ -0.89
PRPF38A-201ENST00000257181 C1orf137Q5JT78 98 aa9.47□□□□□ -0.89
PRPF38A-201ENST00000257181 FAM19A4Q96LR4 140 aa9.47□□□□□ -0.89
PRPF38A-201ENST00000257181 LOC105371267A0A1B0GV96 52 aa9.47□□□□□ -0.89
PRPF38A-201ENST00000257181 RPL37AP8A6NKH3 93 aa9.47□□□□□ -0.89
PRPF38A-201ENST00000257181 XAGE1AQ9HD64 81 aa9.47□□□□□ -0.89
PRPF38A-201ENST00000257181 C11orf72Q8NBR9 251 aa9.47□□□□□ -0.89
PRPF38A-201ENST00000257181 BPY2O14599 106 aa9.46□□□□□ -0.89
PRPF38A-201ENST00000257181 ANKRD39Q53RE8 183 aa9.46□□□□□ -0.89
PRPF38A-201ENST00000257181 Q8NAQ8 132 aa9.46□□□□□ -0.9
PRPF38A-201ENST00000257181 MRPL55Q7Z7F7 128 aaKnown RBP9.46□□□□□ -0.9
PRPF38A-201ENST00000257181 WFDC10BQ8IUB3 73 aa9.46□□□□□ -0.9
PRPF38A-201ENST00000257181 J3KT08 172 aa9.45□□□□□ -0.9
PRPF38A-201ENST00000257181 KIF25-AS1Q9Y6Z4 181 aa9.45□□□□□ -0.9
PRPF38A-201ENST00000257181 K7EIL1 84 aa9.44□□□□□ -0.9
PRPF38A-201ENST00000257181 TM2D3Q9BRN9 247 aa9.44□□□□□ -0.9
PRPF38A-201ENST00000257181 DAND5Q8N907 189 aa9.44□□□□□ -0.9
PRPF38A-201ENST00000257181 SPTSSBQ8NFR3 76 aa9.44□□□□□ -0.9
PRPF38A-201ENST00000257181 Q6ZRP5 223 aa9.43□□□□□ -0.9
PRPF38A-201ENST00000257181 PCSK5Q92824 1860 aa9.43□□□□□ -0.9
PRPF38A-201ENST00000257181 LINC00242Q5T6M2 205 aa9.43□□□□□ -0.9
PRPF38A-201ENST00000257181 KRTAP1-3Q8IUG1 177 aa9.43□□□□□ -0.9
PRPF38A-201ENST00000257181 AMELXQ99217 191 aa9.43□□□□□ -0.9
PRPF38A-201ENST00000257181 TEX49A0A1B0GTD5 131 aa9.43□□□□□ -0.9
PRPF38A-201ENST00000257181 LINC00337Q8N6G1 96 aa9.43□□□□□ -0.9
PRPF38A-201ENST00000257181 CELA1Q9UNI1 258 aa9.42□□□□□ -0.9
PRPF38A-201ENST00000257181 IGIPA6NJ69 53 aa9.42□□□□□ -0.9
PRPF38A-201ENST00000257181 DNAH10OSP0CZ25 163 aa9.42□□□□□ -0.9
PRPF38A-201ENST00000257181 ESRGQ1W209 222 aa9.41□□□□□ -0.9
PRPF38A-201ENST00000257181 NACAE9PAV3 2078 aa9.41□□□□□ -0.9
PRPF38A-201ENST00000257181 C6orf99Q4VX62 202 aa9.41□□□□□ -0.9
PRPF38A-201ENST00000257181 RTL8CO15255 209 aa9.4□□□□□ -0.9
PRPF38A-201ENST00000257181 CASC2Q6XLA1 102 aa9.4□□□□□ -0.9
PRPF38A-201ENST00000257181 LST1O00453 97 aa9.4□□□□□ -0.9
PRPF38A-201ENST00000257181 SPG11Q96JI7 2443 aa9.4□□□□□ -0.91
PRPF38A-201ENST00000257181 IGKV2-28A0A075B6P5 120 aa9.4□□□□□ -0.91
PRPF38A-201ENST00000257181 IGKV2D-28P01615 120 aa9.4□□□□□ -0.91
PRPF38A-201ENST00000257181 A8MTW9 85 aa9.4□□□□□ -0.91
PRPF38A-201ENST00000257181 J3QL48 77 aa9.39□□□□□ -0.91
PRPF38A-201ENST00000257181 LINC00173Q6ZV60 143 aa9.38□□□□□ -0.91
PRPF38A-201ENST00000257181 TEN1Q86WV5 123 aa9.38□□□□□ -0.91
PRPF38A-201ENST00000257181 SMIM1B2RUZ4 78 aa9.38□□□□□ -0.91
PRPF38A-201ENST00000257181 ATOX1O00244 68 aa9.37□□□□□ -0.91
PRPF38A-201ENST00000257181 LINC00315P59091 139 aa9.37□□□□□ -0.91
PRPF38A-201ENST00000257181 UNQ6190/PRO20217Q6UXQ8 127 aa9.37□□□□□ -0.91
PRPF38A-201ENST00000257181 K7ERJ3 54 aa9.36□□□□□ -0.91
PRPF38A-201ENST00000257181 KRTAP21-3Q3LHN1 58 aa9.36□□□□□ -0.91
PRPF38A-201ENST00000257181 CSPG4Q6UVK1 2322 aa9.36□□□□□ -0.91
PRPF38A-201ENST00000257181 MED13LQ71F56 2210 aa9.36□□□□□ -0.91
PRPF38A-201ENST00000257181 KRTAP1-1Q07627 177 aa9.36□□□□□ -0.91
PRPF38A-201ENST00000257181 IGKV4-1P06312 121 aa9.35□□□□□ -0.91
PRPF38A-201ENST00000257181 COX6A2Q02221 97 aa9.35□□□□□ -0.91
PRPF38A-201ENST00000257181 TRBV7-6A0A0J9YX20 115 aa9.35□□□□□ -0.91
PRPF38A-201ENST00000257181 IGLV4-60A0A075B6I1 120 aa9.35□□□□□ -0.91
PRPF38A-201ENST00000257181 IGLV9-49A0A0B4J1Y8 123 aa9.34□□□□□ -0.91
PRPF38A-201ENST00000257181 TANC2Q9HCD6 1990 aa9.34□□□□□ -0.91
PRPF38A-201ENST00000257181 TMEM258P61165 79 aa9.34□□□□□ -0.91
PRPF38A-201ENST00000257181 A0A1B0GW54 56 aa9.33□□□□□ -0.92
PRPF38A-201ENST00000257181 LINC00588Q9Y4M8 146 aa9.33□□□□□ -0.92
PRPF38A-201ENST00000257181 GVQW2A0A096LPI5 108 aaPredicted RBP9.33□□□□□ -0.92
PRPF38A-201ENST00000257181 WIPF1O43516 503 aa9.32□□□□□ -0.92
PRPF38A-201ENST00000257181 RPL37AP61513 92 aaKnown RBP9.32□□□□□ -0.92
PRPF38A-201ENST00000257181 C9orf116Q5BN46 136 aaPredicted RBP9.32□□□□□ -0.92
PRPF38A-201ENST00000257181 CRYGAP11844 174 aa9.32□□□□□ -0.92
PRPF38A-201ENST00000257181 COL27A1Q8IZC6 1860 aaPredicted RBP9.32□□□□□ -0.92
PRPF38A-201ENST00000257181 HIVEP3Q5T1R4 2406 aa9.32□□□□□ -0.92
PRPF38A-201ENST00000257181 CCKP06307 115 aa9.32□□□□□ -0.92
PRPF38A-201ENST00000257181 KRTAP10-11P60412 298 aa9.31□□□□□ -0.92
PRPF38A-201ENST00000257181 LINC00643Q86TS7 51 aa9.31□□□□□ -0.92
PRPF38A-201ENST00000257181 FXYD2P54710 66 aa9.3□□□□□ -0.92
PRPF38A-201ENST00000257181 ETDBQ3ZM63 59 aa9.3□□□□□ -0.92
PRPF38A-201ENST00000257181 NDUFV3P56181 108 aaKnown RBP9.3□□□□□ -0.92
PRPF38A-201ENST00000257181 Q6ZQY7 126 aa9.3□□□□□ -0.92
PRPF38A-201ENST00000257181 CIRBP-AS1Q8TBR5 109 aa9.3□□□□□ -0.92
PRPF38A-201ENST00000257181 PPDPFQ9H3Y8 114 aa9.3□□□□□ -0.92
PRPF38A-201ENST00000257181 CLEC2BQ92478 149 aa9.29□□□□□ -0.92
PRPF38A-201ENST00000257181 A0A096LNI7 61 aa9.29□□□□□ -0.92
PRPF38A-201ENST00000257181 SPAG11AQ6PDA7 123 aa9.29□□□□□ -0.92
PRPF38A-201ENST00000257181 Q6ZRU5 148 aa9.29□□□□□ -0.92
PRPF38A-201ENST00000257181 PRM2P04554 102 aa9.28□□□□□ -0.92
PRPF38A-201ENST00000257181 Q9BRP9 147 aa9.28□□□□□ -0.92
PRPF38A-201ENST00000257181 TLN1Q9Y490 2541 aaKnown RBP9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms