RNA–Protein interactions for RNA: ENST00000255465.6

CCNA1-201, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-201ENST00000255465 CIRBPQ14011 172 aaKnown RBP8.63□□□□□ -1.03
CCNA1-201ENST00000255465 ATRQ13535 2644 aa8.62□□□□□ -1.03
CCNA1-201ENST00000255465 SOCS3O14543 225 aa8.62□□□□□ -1.03
CCNA1-201ENST00000255465 C11orf21Q9P2W6 132 aa8.62□□□□□ -1.03
CCNA1-201ENST00000255465 ADAMTSL4-AS1Q5T5F5 129 aa8.62□□□□□ -1.03
CCNA1-201ENST00000255465 Q6YL49 198 aa8.62□□□□□ -1.03
CCNA1-201ENST00000255465 MRPL55Q7Z7F7 128 aaKnown RBP8.62□□□□□ -1.03
CCNA1-201ENST00000255465 DNAJC9-AS1A6NH13 148 aa8.61□□□□□ -1.03
CCNA1-201ENST00000255465 K7EIM0 57 aa8.61□□□□□ -1.03
CCNA1-201ENST00000255465 SNRPD3P62318 126 aaKnown RBP8.61□□□□□ -1.03
CCNA1-201ENST00000255465 BLCAPP62952 87 aa8.61□□□□□ -1.03
CCNA1-201ENST00000255465 C9orf47Q6ZRZ4 202 aa8.61□□□□□ -1.03
CCNA1-201ENST00000255465 RNF5Q99942 180 aa8.61□□□□□ -1.03
CCNA1-201ENST00000255465 FBN1P35555 2871 aaKnown RBP8.6□□□□□ -1.03
CCNA1-201ENST00000255465 ODF3BA8MYP8 253 aa8.6□□□□□ -1.03
CCNA1-201ENST00000255465 TRBV12-3P01733 135 aa8.6□□□□□ -1.03
CCNA1-201ENST00000255465 RPL28P46779 137 aaKnown RBP8.6□□□□□ -1.03
CCNA1-201ENST00000255465 KRTAP24-1Q3LI83 254 aa8.6□□□□□ -1.03
CCNA1-201ENST00000255465 C4orf48Q5BLP8 95 aa8.6□□□□□ -1.03
CCNA1-201ENST00000255465 MDFIQ99750 246 aa8.6□□□□□ -1.03
CCNA1-201ENST00000255465 ZNRD1Q9P1U0 126 aa8.6□□□□□ -1.03
CCNA1-201ENST00000255465 ERC2-IT1O76042 136 aa8.59□□□□□ -1.03
CCNA1-201ENST00000255465 RNASE4P34096 147 aaKnown RBP8.59□□□□□ -1.03
CCNA1-201ENST00000255465 STHQ8IWL8 128 aa8.59□□□□□ -1.03
CCNA1-201ENST00000255465 FAM110DQ8TAY7 271 aaPredicted RBP8.59□□□□□ -1.03
CCNA1-201ENST00000255465 MOB4Q9Y3A3 225 aa8.59□□□□□ -1.03
CCNA1-201ENST00000255465 IGHV3-21A0A0B4J1V1 117 aa8.58□□□□□ -1.04
CCNA1-201ENST00000255465 TRAV12-3A0A0B4J271 114 aa8.58□□□□□ -1.04
CCNA1-201ENST00000255465 IGLV1-47P01700 117 aa8.58□□□□□ -1.04
CCNA1-201ENST00000255465 IGHV4-59P01825 116 aa8.58□□□□□ -1.04
CCNA1-201ENST00000255465 Q8N2B8 174 aa8.58□□□□□ -1.04
CCNA1-201ENST00000255465 LINC00474Q9P2X8 69 aa8.58□□□□□ -1.04
CCNA1-201ENST00000255465 NACAE9PAV3 2078 aa8.58□□□□□ -1.04
CCNA1-201ENST00000255465 F8WEM9 126 aa8.57□□□□□ -1.04
CCNA1-201ENST00000255465 NDUFA1O15239 70 aa8.57□□□□□ -1.04
CCNA1-201ENST00000255465 RNASE1P07998 156 aaKnown RBP8.57□□□□□ -1.04
CCNA1-201ENST00000255465 MINOS1Q5TGZ0 78 aa8.57□□□□□ -1.04
CCNA1-201ENST00000255465 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.57□□□□□ -1.04
CCNA1-201ENST00000255465 MINOS1-NBL1R4GNA1 71 aa8.57□□□□□ -1.04
CCNA1-201ENST00000255465 COL6A5A8TX70 2615 aa8.57□□□□□ -1.04
CCNA1-201ENST00000255465 H0YGX0 51 aa8.57□□□□□ -1.04
CCNA1-201ENST00000255465 MGPP08493 103 aa8.57□□□□□ -1.04
CCNA1-201ENST00000255465 PHLDA3Q9Y5J5 127 aa8.57□□□□□ -1.04
CCNA1-201ENST00000255465 SMAD5-AS1Q9Y6J3 95 aa8.57□□□□□ -1.04
CCNA1-201ENST00000255465 BUB1B-PAK6H3BSN5 160 aa8.56□□□□□ -1.04
CCNA1-201ENST00000255465 PAX4O43316 350 aa8.56□□□□□ -1.04
CCNA1-201ENST00000255465 RPL39P62891 51 aaKnown RBP8.56□□□□□ -1.04
CCNA1-201ENST00000255465 HIST2H2BDQ6DRA6 164 aa8.56□□□□□ -1.04
CCNA1-201ENST00000255465 DPM3Q9P2X0 92 aa8.56□□□□□ -1.04
CCNA1-201ENST00000255465 TRAV23DV6A0A075B6W5 121 aa8.55□□□□□ -1.04
CCNA1-201ENST00000255465 TRAV21A0A0B4J279 112 aa8.55□□□□□ -1.04
CCNA1-201ENST00000255465 H3BUX3 64 aa8.55□□□□□ -1.04
CCNA1-201ENST00000255465 LINC00308Q8TCZ7 52 aa8.55□□□□□ -1.04
CCNA1-201ENST00000255465 DYNLRB2Q8TF09 96 aa8.55□□□□□ -1.04
CCNA1-201ENST00000255465 CCDC140Q96MF4 163 aa8.55□□□□□ -1.04
CCNA1-201ENST00000255465 KIF25-AS1Q9Y6Z4 181 aa8.55□□□□□ -1.04
CCNA1-201ENST00000255465 SS18Q15532 418 aa8.55□□□□□ -1.04
CCNA1-201ENST00000255465 ESRGQ1W209 222 aa8.55□□□□□ -1.04
CCNA1-201ENST00000255465 Q6ZSV7 163 aa8.55□□□□□ -1.04
CCNA1-201ENST00000255465 DNHD1Q96M86 4753 aa8.55□□□□□ -1.04
CCNA1-201ENST00000255465 A0A0J9YXV3 536 aa8.54□□□□□ -1.04
CCNA1-201ENST00000255465 C20orf203Q8NBC4 194 aa8.54□□□□□ -1.04
CCNA1-201ENST00000255465 C14orf132Q9NPU4 83 aa8.54□□□□□ -1.04
CCNA1-201ENST00000255465 IGLV4-3A0A075B6K6 122 aa8.53□□□□□ -1.04
CCNA1-201ENST00000255465 LYRM9A8MSI8 78 aa8.53□□□□□ -1.04
CCNA1-201ENST00000255465 JMJD7-PLA2G4BH0Y9G9 81 aa8.53□□□□□ -1.04
CCNA1-201ENST00000255465 S100A4P26447 101 aaKnown RBP8.53□□□□□ -1.04
CCNA1-201ENST00000255465 LINC00315P59091 139 aa8.53□□□□□ -1.04
CCNA1-201ENST00000255465 LY6EQ16553 131 aa8.53□□□□□ -1.04
CCNA1-201ENST00000255465 UBL5Q9BZL1 73 aa8.52□□□□□ -1.05
CCNA1-201ENST00000255465 U3KQE9 123 aa8.52□□□□□ -1.05
CCNA1-201ENST00000255465 IGHV3-64A0A075B6Q5 118 aa8.51□□□□□ -1.05
CCNA1-201ENST00000255465 PRAC2D3DTV9 90 aa8.51□□□□□ -1.05
CCNA1-201ENST00000255465 A6NDX4 124 aa8.51□□□□□ -1.05
CCNA1-201ENST00000255465 MIFP14174 115 aa8.51□□□□□ -1.05
CCNA1-201ENST00000255465 Q1T7F1 81 aa8.51□□□□□ -1.05
CCNA1-201ENST00000255465 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.51□□□□□ -1.05
CCNA1-201ENST00000255465 FAM218AQ96MZ4 157 aa8.51□□□□□ -1.05
CCNA1-201ENST00000255465 DAD1P61803 113 aa8.5□□□□□ -1.05
CCNA1-201ENST00000255465 SUMO4Q6EEV6 95 aa8.5□□□□□ -1.05
CCNA1-201ENST00000255465 SPATA3Q8NHX4 192 aa8.5□□□□□ -1.05
CCNA1-201ENST00000255465 TM2D3Q9BRN9 247 aa8.5□□□□□ -1.05
CCNA1-201ENST00000255465 IGHV1-3A0A0C4DH29 117 aa8.49□□□□□ -1.05
CCNA1-201ENST00000255465 STAB1Q9NY15 2570 aa8.49□□□□□ -1.05
CCNA1-201ENST00000255465 RMI2Q96E14 147 aa8.49□□□□□ -1.05
CCNA1-201ENST00000255465 IGLV11-55A0A075B6I3 123 aa8.48□□□□□ -1.05
CCNA1-201ENST00000255465 ADARB2-AS1A8MUL3 147 aa8.48□□□□□ -1.05
CCNA1-201ENST00000255465 ENHOQ6UWT2 76 aa8.48□□□□□ -1.05
CCNA1-201ENST00000255465 OPRPNQ99935 248 aaPredicted RBP8.48□□□□□ -1.05
CCNA1-201ENST00000255465 IGLV5-45A0A087WSX0 123 aa8.47□□□□□ -1.05
CCNA1-201ENST00000255465 IGHV3-72A0A0B4J1Y9 119 aa8.47□□□□□ -1.05
CCNA1-201ENST00000255465 C15orf32Q32M92 178 aa8.47□□□□□ -1.05
CCNA1-201ENST00000255465 PRB4P10163 310 aaPredicted RBP8.47□□□□□ -1.05
CCNA1-201ENST00000255465 LINC01006Q8NI28 216 aa8.47□□□□□ -1.05
CCNA1-201ENST00000255465 C11orf68Q9H3H3 251 aaKnown RBP8.47□□□□□ -1.05
CCNA1-201ENST00000255465 TENM1Q9UKZ4 2725 aa8.46□□□□□ -1.06
CCNA1-201ENST00000255465 TRBV7-4A0A0J9YYF1 115 aa8.46□□□□□ -1.06
CCNA1-201ENST00000255465 CLPSL1A2RUU4 121 aa8.46□□□□□ -1.06
CCNA1-201ENST00000255465 F6UB75 175 aa8.46□□□□□ -1.06
CCNA1-201ENST00000255465 KTN1-AS1Q86SY8 53 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms