RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 IGHV3-30-5P0DP03 117 aa13.15□□□□□ -0.3
TRIM47-201ENST00000254816 GAGE6Q13070 117 aa13.15□□□□□ -0.3
TRIM47-201ENST00000254816 TIMM21Q9BVV7 248 aa13.15□□□□□ -0.3
TRIM47-201ENST00000254816 MTURNQ8N3F0 131 aa13.15□□□□□ -0.3
TRIM47-201ENST00000254816 C11orf68Q9H3H3 251 aaKnown RBP13.14□□□□□ -0.31
TRIM47-201ENST00000254816 SPANXB1Q9NS25 103 aaPredicted RBP13.14□□□□□ -0.31
TRIM47-201ENST00000254816 TRAV8-3A0A0A6YYJ7 113 aa13.14□□□□□ -0.31
TRIM47-201ENST00000254816 TEX48A0A1B0GUV7 120 aa13.14□□□□□ -0.31
TRIM47-201ENST00000254816 MRPS36P82909 103 aaKnown RBP13.14□□□□□ -0.31
TRIM47-201ENST00000254816 CHCHD5Q9BSY4 110 aa13.14□□□□□ -0.31
TRIM47-201ENST00000254816 HUWE1Q7Z6Z7 4374 aaKnown RBP13.14□□□□□ -0.31
TRIM47-201ENST00000254816 TSPAN13O95857 204 aa13.13□□□□□ -0.31
TRIM47-201ENST00000254816 C21orf62-AS1Q17RA5 79 aa13.13□□□□□ -0.31
TRIM47-201ENST00000254816 Q6ZTC4 211 aa13.13□□□□□ -0.31
TRIM47-201ENST00000254816 IGHV3-30-3P0DP02 117 aa13.12□□□□□ -0.31
TRIM47-201ENST00000254816 RPL24P83731 157 aaKnown RBP13.11□□□□□ -0.31
TRIM47-201ENST00000254816 WFDC2Q14508 124 aa13.11□□□□□ -0.31
TRIM47-201ENST00000254816 C10orf126Q8N4M7 172 aa13.11□□□□□ -0.31
TRIM47-201ENST00000254816 SPATA25Q9BR10 227 aa13.11□□□□□ -0.31
TRIM47-201ENST00000254816 CDC42SE2Q9NRR3 84 aa13.11□□□□□ -0.31
TRIM47-201ENST00000254816 CSDC2Q9Y534 153 aaKnown RBP13.11□□□□□ -0.31
TRIM47-201ENST00000254816 CFC1BP0CG36 223 aa13.1□□□□□ -0.31
TRIM47-201ENST00000254816 CFC1P0CG37 223 aa13.1□□□□□ -0.31
TRIM47-201ENST00000254816 NANOS2P60321 138 aaKnown RBP13.1□□□□□ -0.31
TRIM47-201ENST00000254816 TM2D3Q9BRN9 247 aa13.1□□□□□ -0.31
TRIM47-201ENST00000254816 PCP4P48539 62 aa13.1□□□□□ -0.31
TRIM47-201ENST00000254816 LOC107984156A0A0G2JMH3 177 aa13.09□□□□□ -0.31
TRIM47-201ENST00000254816 SPINK8P0C7L1 97 aa13.09□□□□□ -0.31
TRIM47-201ENST00000254816 ARL17AQ8IVW1 177 aa13.09□□□□□ -0.31
TRIM47-201ENST00000254816 TMEM101Q96IK0 257 aa13.09□□□□□ -0.31
TRIM47-201ENST00000254816 IGLV4-60A0A075B6I1 120 aa13.09□□□□□ -0.31
TRIM47-201ENST00000254816 H7C423 109 aa13.09□□□□□ -0.31
TRIM47-201ENST00000254816 TINCRA0A1B0GVN0 87 aa13.08□□□□□ -0.32
TRIM47-201ENST00000254816 A0A0J9YXY3 114 aa13.08□□□□□ -0.32
TRIM47-201ENST00000254816 TRAV13-1A0A0B4J241 112 aa13.07□□□□□ -0.32
TRIM47-201ENST00000254816 F8W1H4 67 aa13.07□□□□□ -0.32
TRIM47-201ENST00000254816 SMAGPQ0VAQ4 97 aa13.07□□□□□ -0.32
TRIM47-201ENST00000254816 MRPL23Q16540 153 aaKnown RBP13.07□□□□□ -0.32
TRIM47-201ENST00000254816 C11orf45Q8TAV5 145 aa13.07□□□□□ -0.32
TRIM47-201ENST00000254816 ICOSQ9Y6W8 199 aa13.07□□□□□ -0.32
TRIM47-201ENST00000254816 A4D1N5 150 aa13.06□□□□□ -0.32
TRIM47-201ENST00000254816 IGHV1-58A0A0C4DH39 117 aa13.06□□□□□ -0.32
TRIM47-201ENST00000254816 TMEM262E9PQX1 116 aa13.06□□□□□ -0.32
TRIM47-201ENST00000254816 COX6A2Q02221 97 aa13.06□□□□□ -0.32
TRIM47-201ENST00000254816 MUSTN1Q8IVN3 82 aa13.06□□□□□ -0.32
TRIM47-201ENST00000254816 IGKV3OR2-268A0A0C4DH90 116 aa13.05□□□□□ -0.32
TRIM47-201ENST00000254816 EIF4EBP3O60516 100 aaPredicted RBP13.05□□□□□ -0.32
TRIM47-201ENST00000254816 SH2D6Q7Z4S9 175 aa13.05□□□□□ -0.32
TRIM47-201ENST00000254816 GEMIN7Q9H840 131 aaKnown RBP13.05□□□□□ -0.32
TRIM47-201ENST00000254816 PRO0461Q9UI25 63 aa13.05□□□□□ -0.32
TRIM47-201ENST00000254816 PSMB2P49721 201 aa13.05□□□□□ -0.32
TRIM47-201ENST00000254816 TMEM238C9JI98 176 aa13.04□□□□□ -0.32
TRIM47-201ENST00000254816 LINC00242Q5T6M2 205 aa13.04□□□□□ -0.32
TRIM47-201ENST00000254816 ETDBQ3ZM63 59 aa13.04□□□□□ -0.32
TRIM47-201ENST00000254816 CDKN2A-AS1Q9UH64 79 aa13.04□□□□□ -0.32
TRIM47-201ENST00000254816 PRO1854Q9UHT4 67 aa13.03□□□□□ -0.32
TRIM47-201ENST00000254816 NDUFA12Q9UI09 145 aa13.03□□□□□ -0.32
TRIM47-201ENST00000254816 Q8N3U1 123 aa13.02□□□□□ -0.32
TRIM47-201ENST00000254816 LITAFQ99732 161 aa13.02□□□□□ -0.32
TRIM47-201ENST00000254816 DNAH9Q9NYC9 4486 aa13.02□□□□□ -0.33
TRIM47-201ENST00000254816 DEFB131BA0A096LNP1 70 aa13.01□□□□□ -0.33
TRIM47-201ENST00000254816 H7C2G1 150 aa13.01□□□□□ -0.33
TRIM47-201ENST00000254816 TIRAPP58753 221 aa13.01□□□□□ -0.33
TRIM47-201ENST00000254816 ADAMTSL4-AS1Q5T5F5 129 aa13.01□□□□□ -0.33
TRIM47-201ENST00000254816 NPC2P61916 151 aa13□□□□□ -0.33
TRIM47-201ENST00000254816 PRSS2P07478 247 aa12.99□□□□□ -0.33
TRIM47-201ENST00000254816 FAM19A3Q7Z5A8 133 aa12.99□□□□□ -0.33
TRIM47-201ENST00000254816 COL7A1Q02388 2944 aa12.99□□□□□ -0.33
TRIM47-201ENST00000254816 DNHD1Q96M86 4753 aa12.99□□□□□ -0.33
TRIM47-201ENST00000254816 TCL1BO95988 128 aa12.99□□□□□ -0.33
TRIM47-201ENST00000254816 HERVK_113P63121 156 aa12.99□□□□□ -0.33
TRIM47-201ENST00000254816 CLPSL2Q6UWE3 100 aa12.99□□□□□ -0.33
TRIM47-201ENST00000254816 IGLV5-45A0A087WSX0 123 aa12.98□□□□□ -0.33
TRIM47-201ENST00000254816 LYPD5Q6UWN5 251 aa12.98□□□□□ -0.33
TRIM47-201ENST00000254816 A0A1B0GUV1 79 aa12.97□□□□□ -0.33
TRIM47-201ENST00000254816 IGHV3-33P01772 117 aa12.97□□□□□ -0.33
TRIM47-201ENST00000254816 SMCPP49901 116 aaPredicted RBP12.97□□□□□ -0.33
TRIM47-201ENST00000254816 LELP1Q5T871 98 aa12.97□□□□□ -0.33
TRIM47-201ENST00000254816 H3BNG1 76 aa12.96□□□□□ -0.33
TRIM47-201ENST00000254816 SCGB1C2P0DMR2 95 aa12.96□□□□□ -0.33
TRIM47-201ENST00000254816 ZFAND6Q6FIF0 208 aa12.96□□□□□ -0.33
TRIM47-201ENST00000254816 A0A0B4J2C4 111 aa12.96□□□□□ -0.34
TRIM47-201ENST00000254816 LYRM7Q5U5X0 104 aa12.95□□□□□ -0.34
TRIM47-201ENST00000254816 DAND5Q8N907 189 aa12.95□□□□□ -0.34
TRIM47-201ENST00000254816 ERG28Q9UKR5 140 aa12.95□□□□□ -0.34
TRIM47-201ENST00000254816 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.93□□□□□ -0.34
TRIM47-201ENST00000254816 LINC00959A0A1B0GUT2 108 aa12.93□□□□□ -0.34
TRIM47-201ENST00000254816 MIAQ16674 131 aa12.93□□□□□ -0.34
TRIM47-201ENST00000254816 Q1RN00 199 aa12.93□□□□□ -0.34
TRIM47-201ENST00000254816 SPANXDQ9BXN6 97 aa12.93□□□□□ -0.34
TRIM47-201ENST00000254816 SPANXCQ9NY87 97 aa12.93□□□□□ -0.34
TRIM47-201ENST00000254816 ANGP03950 147 aaKnown RBP12.93□□□□□ -0.34
TRIM47-201ENST00000254816 LINC00269Q8N2A0 174 aa12.93□□□□□ -0.34
TRIM47-201ENST00000254816 TRAV10A0A0B4J240 114 aa12.91□□□□□ -0.34
TRIM47-201ENST00000254816 SMIM1B2RUZ4 78 aa12.91□□□□□ -0.34
TRIM47-201ENST00000254816 ZNF625Q96I27 306 aaPredicted RBP12.91□□□□□ -0.34
TRIM47-201ENST00000254816 TRBV20-1A0A075B6N2 111 aa12.91□□□□□ -0.34
TRIM47-201ENST00000254816 NDUFA1O15239 70 aa12.91□□□□□ -0.34
TRIM47-201ENST00000254816 ESRGQ1W209 222 aa12.91□□□□□ -0.34
TRIM47-201ENST00000254816 B9D2Q9BPU9 175 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms