RNA–Protein interactions for RNA: ENST00000254667.7

PTPRE-201, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRE, Length 5,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-201ENST00000254667 A0A096LNI7 61 aa13.76□□□□□ -0.21
PTPRE-201ENST00000254667 GAS8-AS1O95177 125 aa13.76□□□□□ -0.21
PTPRE-201ENST00000254667 J3KT08 172 aa13.75□□□□□ -0.21
PTPRE-201ENST00000254667 NANOS2P60321 138 aaKnown RBP13.75□□□□□ -0.21
PTPRE-201ENST00000254667 IGLV2-18A0A075B6J9 118 aa13.75□□□□□ -0.21
PTPRE-201ENST00000254667 LINC00474Q9P2X8 69 aa13.75□□□□□ -0.21
PTPRE-201ENST00000254667 ABCA2Q9BZC7 2435 aa13.74□□□□□ -0.21
PTPRE-201ENST00000254667 EDN2P20800 178 aa13.74□□□□□ -0.21
PTPRE-201ENST00000254667 C2orf91Q6ZV80 131 aa13.74□□□□□ -0.21
PTPRE-201ENST00000254667 IGKV4-1P06312 121 aa13.74□□□□□ -0.21
PTPRE-201ENST00000254667 LRCOL1A6NCL2 159 aa13.73□□□□□ -0.21
PTPRE-201ENST00000254667 TANC2Q9HCD6 1990 aa13.73□□□□□ -0.21
PTPRE-201ENST00000254667 CCKP06307 115 aa13.73□□□□□ -0.21
PTPRE-201ENST00000254667 IGKV2-28A0A075B6P5 120 aa13.72□□□□□ -0.21
PTPRE-201ENST00000254667 IGKV2D-28P01615 120 aa13.72□□□□□ -0.21
PTPRE-201ENST00000254667 LST1O00453 97 aa13.72□□□□□ -0.21
PTPRE-201ENST00000254667 Q6ZQY7 126 aa13.71□□□□□ -0.21
PTPRE-201ENST00000254667 LINC00526Q96FQ7 95 aa13.71□□□□□ -0.21
PTPRE-201ENST00000254667 LINC00242Q5T6M2 205 aa13.71□□□□□ -0.22
PTPRE-201ENST00000254667 SDIM1Q6ZPB5 146 aa13.7□□□□□ -0.22
PTPRE-201ENST00000254667 C1orf158Q8N1D5 194 aa13.7□□□□□ -0.22
PTPRE-201ENST00000254667 NUPR2A6NF83 97 aa13.7□□□□□ -0.22
PTPRE-201ENST00000254667 ARHGAP32A7KAX9 2087 aa13.69□□□□□ -0.22
PTPRE-201ENST00000254667 CYSRT1A8MQ03 144 aa13.69□□□□□ -0.22
PTPRE-201ENST00000254667 ZNF73O43830 326 aaPredicted RBP13.69□□□□□ -0.22
PTPRE-201ENST00000254667 SMIM11BQ8TCY0 68 aa13.69□□□□□ -0.22
PTPRE-201ENST00000254667 MYO9AB2RTY4 2548 aa13.68□□□□□ -0.22
PTPRE-201ENST00000254667 C2CD3Q4AC94 2353 aa13.68□□□□□ -0.22
PTPRE-201ENST00000254667 PRB2P02812 416 aaPredicted RBP13.68□□□□□ -0.22
PTPRE-201ENST00000254667 SEC61GP60059 68 aa13.68□□□□□ -0.22
PTPRE-201ENST00000254667 EGFEM1PQ0D2K5 195 aa13.67□□□□□ -0.22
PTPRE-201ENST00000254667 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.67□□□□□ -0.22
PTPRE-201ENST00000254667 M0R2N4 97 aa13.67□□□□□ -0.22
PTPRE-201ENST00000254667 POM121L12Q8N7R1 296 aa13.67□□□□□ -0.22
PTPRE-201ENST00000254667 ENHOQ6UWT2 76 aa13.67□□□□□ -0.22
PTPRE-201ENST00000254667 CSDC2Q9Y534 153 aaKnown RBP13.67□□□□□ -0.22
PTPRE-201ENST00000254667 NDUFV3P56181 108 aaKnown RBP13.66□□□□□ -0.22
PTPRE-201ENST00000254667 BEAN1Q3B7T3 259 aa13.66□□□□□ -0.22
PTPRE-201ENST00000254667 LY6G6CO95867 125 aa13.66□□□□□ -0.22
PTPRE-201ENST00000254667 MT-ATP8P03928 68 aa13.66□□□□□ -0.22
PTPRE-201ENST00000254667 UQCRQO14949 82 aa13.65□□□□□ -0.22
PTPRE-201ENST00000254667 CPAMD8Q8IZJ3 1885 aa13.65□□□□□ -0.22
PTPRE-201ENST00000254667 NDUFC2O95298 119 aa13.65□□□□□ -0.22
PTPRE-201ENST00000254667 FHL2Q14192 279 aa13.65□□□□□ -0.22
PTPRE-201ENST00000254667 USP17L23D6RBM5 183 aa13.64□□□□□ -0.23
PTPRE-201ENST00000254667 SMIM1B2RUZ4 78 aa13.64□□□□□ -0.23
PTPRE-201ENST00000254667 SCXQ7RTU7 201 aa13.63□□□□□ -0.23
PTPRE-201ENST00000254667 URB1-AS1Q96HZ7 61 aa13.63□□□□□ -0.23
PTPRE-201ENST00000254667 C20orf197Q8N268 126 aa13.62□□□□□ -0.23
PTPRE-201ENST00000254667 LINC00310P59036 64 aa13.62□□□□□ -0.23
PTPRE-201ENST00000254667 CASC2Q6XLA1 102 aa13.61□□□□□ -0.23
PTPRE-201ENST00000254667 RAI1Q7Z5J4 1906 aaPredicted RBP13.61□□□□□ -0.23
PTPRE-201ENST00000254667 IMUPQ9GZP8 106 aa13.61□□□□□ -0.23
PTPRE-201ENST00000254667 PLAC8L1A1L4L8 177 aa13.6□□□□□ -0.23
PTPRE-201ENST00000254667 F8WDY8 70 aa13.6□□□□□ -0.23
PTPRE-201ENST00000254667 RETNQ9HD89 108 aa13.6□□□□□ -0.23
PTPRE-201ENST00000254667 C3orf84H3BNL1 204 aa13.6□□□□□ -0.23
PTPRE-201ENST00000254667 PPDPFQ9H3Y8 114 aa13.6□□□□□ -0.23
PTPRE-201ENST00000254667 RPL37AP8A6NKH3 93 aa13.6□□□□□ -0.23
PTPRE-201ENST00000254667 AMELXQ99217 191 aa13.6□□□□□ -0.23
PTPRE-201ENST00000254667 UNQ6190/PRO20217Q6UXQ8 127 aa13.59□□□□□ -0.23
PTPRE-201ENST00000254667 Q6ZTC4 211 aa13.57□□□□□ -0.24
PTPRE-201ENST00000254667 WFDC10BQ8IUB3 73 aa13.57□□□□□ -0.24
PTPRE-201ENST00000254667 Q8N2B8 174 aa13.57□□□□□ -0.24
PTPRE-201ENST00000254667 IGLV4-60A0A075B6I1 120 aa13.56□□□□□ -0.24
PTPRE-201ENST00000254667 A0A1B0GUV1 79 aa13.56□□□□□ -0.24
PTPRE-201ENST00000254667 LINC00694P0DN24 101 aa13.55□□□□□ -0.24
PTPRE-201ENST00000254667 ADAMTS20P59510 1910 aa13.55□□□□□ -0.24
PTPRE-201ENST00000254667 C3orf22Q8N5N4 141 aa13.54□□□□□ -0.24
PTPRE-201ENST00000254667 M0QXV9 152 aa13.54□□□□□ -0.24
PTPRE-201ENST00000254667 RPL28P46779 137 aaKnown RBP13.53□□□□□ -0.24
PTPRE-201ENST00000254667 FAM236DA0A1B0GTK5 79 aa13.53□□□□□ -0.24
PTPRE-201ENST00000254667 FAM236CP0DP71 79 aa13.53□□□□□ -0.24
PTPRE-201ENST00000254667 LINC01561Q8N1V8 128 aa13.53□□□□□ -0.24
PTPRE-201ENST00000254667 COX6A2Q02221 97 aa13.53□□□□□ -0.24
PTPRE-201ENST00000254667 NDUFC1O43677 76 aa13.51□□□□□ -0.25
PTPRE-201ENST00000254667 EP400Q96L91 3159 aa13.51□□□□□ -0.25
PTPRE-201ENST00000254667 SPINK6Q6UWN8 80 aa13.5□□□□□ -0.25
PTPRE-201ENST00000254667 FAM19A3Q7Z5A8 133 aa13.5□□□□□ -0.25
PTPRE-201ENST00000254667 C2orf48Q96LS8 159 aa13.5□□□□□ -0.25
PTPRE-201ENST00000254667 NTM-AS1Q6ZSK4 140 aa13.5□□□□□ -0.25
PTPRE-201ENST00000254667 EML5Q05BV3 1969 aa13.49□□□□□ -0.25
PTPRE-201ENST00000254667 EXPH5Q8NEV8 1989 aa13.49□□□□□ -0.25
PTPRE-201ENST00000254667 TRBV10-3A0A0K0K1G6 114 aa13.49□□□□□ -0.25
PTPRE-201ENST00000254667 C10orf25Q5T742 122 aa13.49□□□□□ -0.25
PTPRE-201ENST00000254667 SERP2Q8N6R1 65 aa13.49□□□□□ -0.25
PTPRE-201ENST00000254667 ATP5EP56381 51 aaPredicted RBP13.48□□□□□ -0.25
PTPRE-201ENST00000254667 C6orf223Q8N319 242 aa13.48□□□□□ -0.25
PTPRE-201ENST00000254667 Q8N814 137 aa13.48□□□□□ -0.25
PTPRE-201ENST00000254667 IGLV9-49A0A0B4J1Y8 123 aa13.48□□□□□ -0.25
PTPRE-201ENST00000254667 TSPEAR-AS2P59090 65 aa13.48□□□□□ -0.25
PTPRE-201ENST00000254667 REG3GQ6UW15 175 aa13.48□□□□□ -0.25
PTPRE-201ENST00000254667 Q6ZSN1 163 aa13.48□□□□□ -0.25
PTPRE-201ENST00000254667 LYPD5Q6UWN5 251 aa13.47□□□□□ -0.25
PTPRE-201ENST00000254667 C9orf116Q5BN46 136 aaPredicted RBP13.47□□□□□ -0.25
PTPRE-201ENST00000254667 Q6JHZ5 121 aa13.47□□□□□ -0.25
PTPRE-201ENST00000254667 NDUFC2-KCTD14E9PQ53 114 aa13.47□□□□□ -0.25
PTPRE-201ENST00000254667 A0A096LNJ9 63 aa13.47□□□□□ -0.25
PTPRE-201ENST00000254667 FAM240AA0A1B0GVK7 77 aa13.46□□□□□ -0.25
PTPRE-201ENST00000254667 WFDC13Q8IUB5 93 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms