RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 NDUFA11Q86Y39 141 aa11.26□□□□□ -0.61
LRFN1-201ENST00000248668 K7EQD1 137 aa11.26□□□□□ -0.61
LRFN1-201ENST00000248668 IL17DQ8TAD2 202 aa11.26□□□□□ -0.61
LRFN1-201ENST00000248668 TRAV8-4A0A0B4J246 113 aa11.25□□□□□ -0.61
LRFN1-201ENST00000248668 MRPS36P82909 103 aaKnown RBP11.25□□□□□ -0.61
LRFN1-201ENST00000248668 RPL36AP83881 106 aaKnown RBP11.25□□□□□ -0.61
LRFN1-201ENST00000248668 RPL36ALQ969Q0 106 aaKnown RBP11.25□□□□□ -0.61
LRFN1-201ENST00000248668 DNAJC30Q96LL9 226 aa11.25□□□□□ -0.61
LRFN1-201ENST00000248668 SPANXA1Q9NS26 97 aa11.25□□□□□ -0.61
LRFN1-201ENST00000248668 NOTCH1P46531 2555 aa11.24□□□□□ -0.61
LRFN1-201ENST00000248668 TRAV13-1A0A0B4J241 112 aa11.24□□□□□ -0.61
LRFN1-201ENST00000248668 TEX49A0A1B0GTD5 131 aa11.24□□□□□ -0.61
LRFN1-201ENST00000248668 NTM-AS1Q6ZSK4 140 aa11.24□□□□□ -0.61
LRFN1-201ENST00000248668 CDKN2A-AS1Q9UH64 79 aa11.24□□□□□ -0.61
LRFN1-201ENST00000248668 PRSS2P07478 247 aa11.24□□□□□ -0.61
LRFN1-201ENST00000248668 CFC1BP0CG36 223 aa11.24□□□□□ -0.61
LRFN1-201ENST00000248668 CFC1P0CG37 223 aa11.24□□□□□ -0.61
LRFN1-201ENST00000248668 PLAC8L1A1L4L8 177 aa11.24□□□□□ -0.61
LRFN1-201ENST00000248668 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.24□□□□□ -0.61
LRFN1-201ENST00000248668 LYRM7Q5U5X0 104 aa11.23□□□□□ -0.61
LRFN1-201ENST00000248668 MUSTN1Q8IVN3 82 aa11.23□□□□□ -0.61
LRFN1-201ENST00000248668 COX6A2Q02221 97 aa11.23□□□□□ -0.61
LRFN1-201ENST00000248668 C9orf153Q5TBE3 101 aa11.23□□□□□ -0.61
LRFN1-201ENST00000248668 IGKV3OR2-268A0A0C4DH90 116 aa11.22□□□□□ -0.61
LRFN1-201ENST00000248668 A0A0J9YXY3 114 aa11.22□□□□□ -0.61
LRFN1-201ENST00000248668 DEFB130BP0DP73 79 aa11.22□□□□□ -0.61
LRFN1-201ENST00000248668 DEFB130AP0DP74 79 aa11.22□□□□□ -0.61
LRFN1-201ENST00000248668 C5orf47Q569G3 176 aa11.22□□□□□ -0.61
LRFN1-201ENST00000248668 NDUFA12Q9UI09 145 aa11.22□□□□□ -0.61
LRFN1-201ENST00000248668 TRGV4A0A0C4DH28 118 aa11.21□□□□□ -0.61
LRFN1-201ENST00000248668 A0A0U1RRA0 63 aa11.21□□□□□ -0.61
LRFN1-201ENST00000248668 DAND5Q8N907 189 aa11.21□□□□□ -0.61
LRFN1-201ENST00000248668 C16orf74Q96GX8 76 aa11.21□□□□□ -0.61
LRFN1-201ENST00000248668 IGHV1-58A0A0C4DH39 117 aa11.21□□□□□ -0.62
LRFN1-201ENST00000248668 LINC00482Q8N8I6 264 aa11.21□□□□□ -0.62
LRFN1-201ENST00000248668 CSNK1G2-AS1Q8NCQ2 148 aa11.21□□□□□ -0.62
LRFN1-201ENST00000248668 ZNF625Q96I27 306 aaPredicted RBP11.21□□□□□ -0.62
LRFN1-201ENST00000248668 TINCRA0A1B0GVN0 87 aa11.2□□□□□ -0.62
LRFN1-201ENST00000248668 EIF4EBP3O60516 100 aaPredicted RBP11.19□□□□□ -0.62
LRFN1-201ENST00000248668 ADAMTSL4-AS1Q5T5F5 129 aa11.19□□□□□ -0.62
LRFN1-201ENST00000248668 VSIG2Q96IQ7 327 aa11.19□□□□□ -0.62
LRFN1-201ENST00000248668 CMC4P56277 68 aaPredicted RBP11.19□□□□□ -0.62
LRFN1-201ENST00000248668 DAZ2Q13117 558 aaKnown RBP11.19□□□□□ -0.62
LRFN1-201ENST00000248668 SBSPONQ8IVN8 264 aa11.19□□□□□ -0.62
LRFN1-201ENST00000248668 FAM236AA0A1B0GUQ0 79 aa11.18□□□□□ -0.62
LRFN1-201ENST00000248668 FAM236BA0A1B0GV22 79 aa11.18□□□□□ -0.62
LRFN1-201ENST00000248668 STAB1Q9NY15 2570 aa11.18□□□□□ -0.62
LRFN1-201ENST00000248668 SMIM9A6NGZ8 99 aa11.17□□□□□ -0.62
LRFN1-201ENST00000248668 PRO1854Q9UHT4 67 aa11.17□□□□□ -0.62
LRFN1-201ENST00000248668 TRBV10-1A0A0K0K1A3 114 aa11.17□□□□□ -0.62
LRFN1-201ENST00000248668 UBE2L6O14933 153 aa11.17□□□□□ -0.62
LRFN1-201ENST00000248668 DEFB4AO15263 64 aa11.17□□□□□ -0.62
LRFN1-201ENST00000248668 FAM19A5Q7Z5A7 132 aaPredicted RBP11.17□□□□□ -0.62
LRFN1-201ENST00000248668 LINC00242Q5T6M2 205 aa11.16□□□□□ -0.62
LRFN1-201ENST00000248668 DAZ4Q86SG3 579 aaKnown RBP11.16□□□□□ -0.62
LRFN1-201ENST00000248668 DAZ3Q9NR90 486 aaKnown RBP11.16□□□□□ -0.62
LRFN1-201ENST00000248668 TMEM101Q96IK0 257 aa11.16□□□□□ -0.62
LRFN1-201ENST00000248668 COL6A5A8TX70 2615 aa11.15□□□□□ -0.62
LRFN1-201ENST00000248668 LITAFQ99732 161 aa11.15□□□□□ -0.62
LRFN1-201ENST00000248668 A0A096LPF7 62 aa11.14□□□□□ -0.63
LRFN1-201ENST00000248668 TMEM243Q9BU79 118 aa11.14□□□□□ -0.63
LRFN1-201ENST00000248668 HERVK_113P63121 156 aa11.13□□□□□ -0.63
LRFN1-201ENST00000248668 FHL2Q14192 279 aa11.13□□□□□ -0.63
LRFN1-201ENST00000248668 Q9H8V8 135 aa11.13□□□□□ -0.63
LRFN1-201ENST00000248668 CDC42SE2Q9NRR3 84 aa11.13□□□□□ -0.63
LRFN1-201ENST00000248668 C2orf82Q6UX34 121 aa11.12□□□□□ -0.63
LRFN1-201ENST00000248668 OVOL2Q9BRP0 275 aa11.11□□□□□ -0.63
LRFN1-201ENST00000248668 TMEM126AQ9H061 195 aa11.11□□□□□ -0.63
LRFN1-201ENST00000248668 IGHV3-33P01772 117 aa11.11□□□□□ -0.63
LRFN1-201ENST00000248668 DEFB135Q30KP9 77 aa11.11□□□□□ -0.63
LRFN1-201ENST00000248668 UBE2WQ96B02 151 aa11.11□□□□□ -0.63
LRFN1-201ENST00000248668 TIRAPP58753 221 aa11.1□□□□□ -0.63
LRFN1-201ENST00000248668 LINC01620Q4KN68 170 aa11.1□□□□□ -0.63
LRFN1-201ENST00000248668 IGLV4-60A0A075B6I1 120 aa11.1□□□□□ -0.63
LRFN1-201ENST00000248668 TRBV6-4A0A1B0GX49 114 aa11.1□□□□□ -0.63
LRFN1-201ENST00000248668 SMIM1B2RUZ4 78 aa11.09□□□□□ -0.63
LRFN1-201ENST00000248668 FBN1P35555 2871 aaKnown RBP11.08□□□□□ -0.64
LRFN1-201ENST00000248668 MIAQ16674 131 aa11.08□□□□□ -0.64
LRFN1-201ENST00000248668 TOMM7Q9P0U1 55 aa11.08□□□□□ -0.64
LRFN1-201ENST00000248668 IGLV5-45A0A087WSX0 123 aa11.08□□□□□ -0.64
LRFN1-201ENST00000248668 GYPEP15421 78 aa11.07□□□□□ -0.64
LRFN1-201ENST00000248668 PRIMA1Q86XR5 153 aa11.07□□□□□ -0.64
LRFN1-201ENST00000248668 X6R8D5 127 aa11.07□□□□□ -0.64
LRFN1-201ENST00000248668 CLPSL2Q6UWE3 100 aa11.07□□□□□ -0.64
LRFN1-201ENST00000248668 TRBV6-8A0A0A6YYG3 113 aa11.06□□□□□ -0.64
LRFN1-201ENST00000248668 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.06□□□□□ -0.64
LRFN1-201ENST00000248668 A0A0B4J2C4 111 aa11.06□□□□□ -0.64
LRFN1-201ENST00000248668 J3KT08 172 aa11.06□□□□□ -0.64
LRFN1-201ENST00000248668 FAM222AQ5U5X8 452 aa11.06□□□□□ -0.64
LRFN1-201ENST00000248668 Q6Q795 121 aa11.06□□□□□ -0.64
LRFN1-201ENST00000248668 HRCT1Q6UXD1 115 aa11.06□□□□□ -0.64
LRFN1-201ENST00000248668 NDUFA1O15239 70 aa11.05□□□□□ -0.64
LRFN1-201ENST00000248668 OR13C6PQ8NH95 151 aa11.05□□□□□ -0.64
LRFN1-201ENST00000248668 BAHCC1Q9P281 2608 aa11.05□□□□□ -0.64
LRFN1-201ENST00000248668 IGLV5-39A0A0G2JS06 123 aa11.05□□□□□ -0.64
LRFN1-201ENST00000248668 F5H768 121 aa11.05□□□□□ -0.64
LRFN1-201ENST00000248668 ATXN8Q156A1 80 aa11.05□□□□□ -0.64
LRFN1-201ENST00000248668 C9orf66Q5T8R8 295 aa11.05□□□□□ -0.64
LRFN1-201ENST00000248668 GAGE2AQ6NT46 116 aa11.05□□□□□ -0.64
LRFN1-201ENST00000248668 TRIAP1O43715 76 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms