RNA–Protein interactions for RNA: ENST00000243103.3

HOXC12-201, Transcript of homeobox C12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC12, Length 3,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12-201ENST00000243103 HAMPP81172 84 aa10.95□□□□□ -0.66
HOXC12-201ENST00000243103 J3QLI3 93 aa10.94□□□□□ -0.66
HOXC12-201ENST00000243103 DCANP1Q8TF63 244 aa10.94□□□□□ -0.66
HOXC12-201ENST00000243103 IGHV4-30-2A0A087WSY4 118 aa10.94□□□□□ -0.66
HOXC12-201ENST00000243103 RBM3P98179 157 aaKnown RBP10.94□□□□□ -0.66
HOXC12-201ENST00000243103 Q6ZSN1 163 aa10.94□□□□□ -0.66
HOXC12-201ENST00000243103 FAM240AA0A1B0GVK7 77 aa10.93□□□□□ -0.66
HOXC12-201ENST00000243103 C2orf48Q96LS8 159 aa10.93□□□□□ -0.66
HOXC12-201ENST00000243103 SPANXA1Q9NS26 97 aa10.93□□□□□ -0.66
HOXC12-201ENST00000243103 HELZ2Q9BYK8 2649 aaKnown RBP10.93□□□□□ -0.66
HOXC12-201ENST00000243103 LRCOL1A6NCL2 159 aa10.93□□□□□ -0.66
HOXC12-201ENST00000243103 SERP2Q8N6R1 65 aa10.93□□□□□ -0.66
HOXC12-201ENST00000243103 AVPP01185 164 aa10.92□□□□□ -0.66
HOXC12-201ENST00000243103 ACYP1P07311 99 aa10.92□□□□□ -0.66
HOXC12-201ENST00000243103 HIST2H2BCQ6DN03 193 aa10.92□□□□□ -0.66
HOXC12-201ENST00000243103 INAFM2P0DMQ5 153 aa10.92□□□□□ -0.66
HOXC12-201ENST00000243103 TEP1Q99973 2627 aaKnown RBP10.92□□□□□ -0.66
HOXC12-201ENST00000243103 IGHV1OR15-1A0A075B7D0 117 aa10.92□□□□□ -0.66
HOXC12-201ENST00000243103 RBMY1BA6NDE4 496 aaKnown RBP10.92□□□□□ -0.66
HOXC12-201ENST00000243103 RBMY1EA6NEQ0 496 aaKnown RBP10.92□□□□□ -0.66
HOXC12-201ENST00000243103 IGHV4-59P01825 116 aa10.92□□□□□ -0.66
HOXC12-201ENST00000243103 RBMY1DP0C7P1 496 aaKnown RBP10.92□□□□□ -0.66
HOXC12-201ENST00000243103 RBMY1A1P0DJD3 496 aaKnown RBP10.92□□□□□ -0.66
HOXC12-201ENST00000243103 RBMY1CP0DJD4 496 aa10.92□□□□□ -0.66
HOXC12-201ENST00000243103 RBMY1FQ15415 496 aaKnown RBP10.92□□□□□ -0.66
HOXC12-201ENST00000243103 MINOS1Q5TGZ0 78 aa10.92□□□□□ -0.66
HOXC12-201ENST00000243103 MIR7-3HGQ8N6C7 128 aa10.92□□□□□ -0.66
HOXC12-201ENST00000243103 UBE2E2Q96LR5 201 aa10.91□□□□□ -0.66
HOXC12-201ENST00000243103 C19orf54Q5BKX5 351 aa10.91□□□□□ -0.66
HOXC12-201ENST00000243103 PRR3P79522 188 aaKnown RBP10.91□□□□□ -0.66
HOXC12-201ENST00000243103 IGHG2P01859 326 aa10.9□□□□□ -0.66
HOXC12-201ENST00000243103 C18orf65Q6ZTR6 163 aa10.9□□□□□ -0.66
HOXC12-201ENST00000243103 LINC01561Q8N1V8 128 aa10.9□□□□□ -0.66
HOXC12-201ENST00000243103 ATRQ13535 2644 aa10.9□□□□□ -0.66
HOXC12-201ENST00000243103 IGHV4OR15-8A0A075B7B6 117 aa10.9□□□□□ -0.66
HOXC12-201ENST00000243103 A0A087WW49 117 aa10.9□□□□□ -0.66
HOXC12-201ENST00000243103 DAD1P61803 113 aa10.9□□□□□ -0.66
HOXC12-201ENST00000243103 ODF3BA8MYP8 253 aa10.89□□□□□ -0.67
HOXC12-201ENST00000243103 CLPSL2Q6UWE3 100 aa10.89□□□□□ -0.67
HOXC12-201ENST00000243103 LINC00474Q9P2X8 69 aa10.89□□□□□ -0.67
HOXC12-201ENST00000243103 APCP25054 2843 aa10.89□□□□□ -0.67
HOXC12-201ENST00000243103 CRYGAP11844 174 aa10.89□□□□□ -0.67
HOXC12-201ENST00000243103 LMO4P61968 165 aa10.89□□□□□ -0.67
HOXC12-201ENST00000243103 CCL19Q99731 98 aa10.89□□□□□ -0.67
HOXC12-201ENST00000243103 SIRPDQ9H106 197 aa10.89□□□□□ -0.67
HOXC12-201ENST00000243103 IGHV1-69P01742 117 aa10.89□□□□□ -0.67
HOXC12-201ENST00000243103 IMUPQ9GZP8 106 aa10.89□□□□□ -0.67
HOXC12-201ENST00000243103 SND1-IT1Q9HBX3 110 aa10.88□□□□□ -0.67
HOXC12-201ENST00000243103 SOCS3O14543 225 aa10.88□□□□□ -0.67
HOXC12-201ENST00000243103 RPL28P46779 137 aaKnown RBP10.88□□□□□ -0.67
HOXC12-201ENST00000243103 TMEM258P61165 79 aa10.87□□□□□ -0.67
HOXC12-201ENST00000243103 C5orf56Q8N8D9 126 aa10.87□□□□□ -0.67
HOXC12-201ENST00000243103 MRPL53Q96EL3 112 aaKnown RBP10.87□□□□□ -0.67
HOXC12-201ENST00000243103 C5orf38Q86SI9 138 aa10.87□□□□□ -0.67
HOXC12-201ENST00000243103 Q8N6K4 173 aa10.87□□□□□ -0.67
HOXC12-201ENST00000243103 PDZD2O15018 2839 aa10.87□□□□□ -0.67
HOXC12-201ENST00000243103 Q6ZTI0 123 aa10.87□□□□□ -0.67
HOXC12-201ENST00000243103 SETXQ7Z333 2677 aaKnown RBP10.87□□□□□ -0.67
HOXC12-201ENST00000243103 RMI2Q96E14 147 aa10.86□□□□□ -0.67
HOXC12-201ENST00000243103 Q5XG85 94 aa10.86□□□□□ -0.67
HOXC12-201ENST00000243103 LENEPQ9Y5L5 61 aa10.86□□□□□ -0.67
HOXC12-201ENST00000243103 ZNF469Q96JG9 3925 aaPredicted RBP10.86□□□□□ -0.67
HOXC12-201ENST00000243103 APRG1Q8IVJ8 170 aa10.85□□□□□ -0.67
HOXC12-201ENST00000243103 SPANXDQ9BXN6 97 aa10.85□□□□□ -0.67
HOXC12-201ENST00000243103 SPANXCQ9NY87 97 aa10.85□□□□□ -0.67
HOXC12-201ENST00000243103 MRPS36P82909 103 aaKnown RBP10.85□□□□□ -0.67
HOXC12-201ENST00000243103 LINC00337Q8N6G1 96 aa10.85□□□□□ -0.67
HOXC12-201ENST00000243103 SMIM11BQ8TCY0 68 aa10.85□□□□□ -0.67
HOXC12-201ENST00000243103 NBEAL1Q6ZS30 2694 aa10.85□□□□□ -0.67
HOXC12-201ENST00000243103 ZNF415Q09FC8 603 aa10.84□□□□□ -0.67
HOXC12-201ENST00000243103 SS18Q15532 418 aa10.84□□□□□ -0.67
HOXC12-201ENST00000243103 AKAP9Q99996 3911 aa10.84□□□□□ -0.67
HOXC12-201ENST00000243103 DEFB131AP59861 70 aa10.84□□□□□ -0.67
HOXC12-201ENST00000243103 SNRPD3P62318 126 aaKnown RBP10.84□□□□□ -0.67
HOXC12-201ENST00000243103 XCL2Q9UBD3 114 aa10.84□□□□□ -0.67
HOXC12-201ENST00000243103 MOB4Q9Y3A3 225 aa10.84□□□□□ -0.67
HOXC12-201ENST00000243103 U3KQE9 123 aa10.84□□□□□ -0.67
HOXC12-201ENST00000243103 A8MTW9 85 aa10.83□□□□□ -0.68
HOXC12-201ENST00000243103 C11orf71Q6IPW1 123 aa10.83□□□□□ -0.68
HOXC12-201ENST00000243103 TRGV1A0A0A0MS02 117 aa10.83□□□□□ -0.68
HOXC12-201ENST00000243103 PRORYQ9H606 182 aa10.83□□□□□ -0.68
HOXC12-201ENST00000243103 HIVEP1P15822 2718 aa10.82□□□□□ -0.68
HOXC12-201ENST00000243103 NBL1P41271 181 aa10.82□□□□□ -0.68
HOXC12-201ENST00000243103 DEFB112Q30KQ8 113 aa10.82□□□□□ -0.68
HOXC12-201ENST00000243103 UBE2D4Q9Y2X8 147 aa10.81□□□□□ -0.68
HOXC12-201ENST00000243103 SLURP1P55000 103 aa10.8□□□□□ -0.68
HOXC12-201ENST00000243103 UPK3BQ9BT76 320 aa10.8□□□□□ -0.68
HOXC12-201ENST00000243103 LAMTOR3Q9UHA4 124 aa10.8□□□□□ -0.68
HOXC12-201ENST00000243103 UBE2L6O14933 153 aa10.8□□□□□ -0.68
HOXC12-201ENST00000243103 MINOS1-NBL1R4GNA1 71 aa10.8□□□□□ -0.68
HOXC12-201ENST00000243103 F8WEM9 126 aa10.79□□□□□ -0.68
HOXC12-201ENST00000243103 A0A096LPF7 62 aa10.79□□□□□ -0.68
HOXC12-201ENST00000243103 PSMB8P28062 276 aa10.79□□□□□ -0.68
HOXC12-201ENST00000243103 LINC00242Q5T6M2 205 aa10.79□□□□□ -0.68
HOXC12-201ENST00000243103 C22orf24Q9Y442 160 aa10.78□□□□□ -0.68
HOXC12-201ENST00000243103 KLLNB2CW77 178 aa10.78□□□□□ -0.68
HOXC12-201ENST00000243103 FAM104AQ969W3 186 aa10.78□□□□□ -0.68
HOXC12-201ENST00000243103 NDUFA1O15239 70 aa10.78□□□□□ -0.68
HOXC12-201ENST00000243103 MED14OSP0DP75 135 aa10.78□□□□□ -0.68
HOXC12-201ENST00000243103 XCL1P47992 114 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms