RNA–Protein interactions for RNA: ENST00000243056.4

HOXC13-201, Transcript of homeobox C13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC13, Length 2,423 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13-201ENST00000243056 MED14OSP0DP75 135 aa14.44□□□□□ -0.1
HOXC13-201ENST00000243056 IGLV1-40P01703 118 aa14.44□□□□□ -0.1
HOXC13-201ENST00000243056 DEFB1P60022 68 aa14.44□□□□□ -0.1
HOXC13-201ENST00000243056 FAM223BA6NKX1 122 aa14.43□□□□□ -0.1
HOXC13-201ENST00000243056 F5H697 171 aa14.43□□□□□ -0.1
HOXC13-201ENST00000243056 Q8N2B8 174 aa14.43□□□□□ -0.1
HOXC13-201ENST00000243056 INAFM2P0DMQ5 153 aa14.43□□□□□ -0.1
HOXC13-201ENST00000243056 C18orf65Q6ZTR6 163 aa14.43□□□□□ -0.1
HOXC13-201ENST00000243056 FAM223AQ8IWN6 122 aa14.43□□□□□ -0.1
HOXC13-201ENST00000243056 TMEM86BQ8N661 226 aa14.43□□□□□ -0.1
HOXC13-201ENST00000243056 FAM218AQ96MZ4 157 aa14.43□□□□□ -0.1
HOXC13-201ENST00000243056 IGHV1-58A0A0C4DH39 117 aa14.42□□□□□ -0.1
HOXC13-201ENST00000243056 TENM1Q9UKZ4 2725 aa14.42□□□□□ -0.1
HOXC13-201ENST00000243056 Q6JHZ5 121 aa14.42□□□□□ -0.1
HOXC13-201ENST00000243056 C9orf85Q96MD7 179 aa14.41□□□□□ -0.1
HOXC13-201ENST00000243056 EDN2P20800 178 aa14.41□□□□□ -0.1
HOXC13-201ENST00000243056 PSMB8P28062 276 aa14.41□□□□□ -0.1
HOXC13-201ENST00000243056 RNASE4P34096 147 aaKnown RBP14.4□□□□□ -0.1
HOXC13-201ENST00000243056 FAM222AQ5U5X8 452 aa14.4□□□□□ -0.1
HOXC13-201ENST00000243056 C20orf203Q8NBC4 194 aa14.4□□□□□ -0.1
HOXC13-201ENST00000243056 UNQ9165/PRO28630Q6UXU0 137 aa14.4□□□□□ -0.1
HOXC13-201ENST00000243056 LENEPQ9Y5L5 61 aa14.4□□□□□ -0.1
HOXC13-201ENST00000243056 TRBV6-5A0A0K0K1A5 114 aa14.39□□□□□ -0.11
HOXC13-201ENST00000243056 EPM2AB3EWF7 344 aa14.39□□□□□ -0.11
HOXC13-201ENST00000243056 RPL11P62913 178 aaKnown RBP14.39□□□□□ -0.11
HOXC13-201ENST00000243056 C16orf92Q96LL3 132 aa14.39□□□□□ -0.11
HOXC13-201ENST00000243056 ATRQ13535 2644 aa14.39□□□□□ -0.11
HOXC13-201ENST00000243056 FAM104AQ969W3 186 aa14.39□□□□□ -0.11
HOXC13-201ENST00000243056 VSIG2Q96IQ7 327 aa14.39□□□□□ -0.11
HOXC13-201ENST00000243056 KLK9Q2XQG4 91 aa14.38□□□□□ -0.11
HOXC13-201ENST00000243056 DEFB136Q30KP8 78 aa14.38□□□□□ -0.11
HOXC13-201ENST00000243056 KLK9Q9UKQ9 250 aa14.38□□□□□ -0.11
HOXC13-201ENST00000243056 C9orf129Q5T035 196 aaKnown RBP14.37□□□□□ -0.11
HOXC13-201ENST00000243056 LINC00846Q9NV44 126 aa14.37□□□□□ -0.11
HOXC13-201ENST00000243056 SEC61GP60059 68 aa14.37□□□□□ -0.11
HOXC13-201ENST00000243056 MRPS36P82909 103 aaKnown RBP14.37□□□□□ -0.11
HOXC13-201ENST00000243056 Q9HAA7 133 aa14.37□□□□□ -0.11
HOXC13-201ENST00000243056 FAM74A4Q5TZK3 123 aa14.36□□□□□ -0.11
HOXC13-201ENST00000243056 RNASE13Q5GAN3 156 aaKnown RBP14.36□□□□□ -0.11
HOXC13-201ENST00000243056 KHDC1LQ5JSQ8 128 aa14.36□□□□□ -0.11
HOXC13-201ENST00000243056 NDUFC2-KCTD14E9PQ53 114 aa14.35□□□□□ -0.11
HOXC13-201ENST00000243056 DNAL4O96015 105 aa14.35□□□□□ -0.11
HOXC13-201ENST00000243056 PRIMA1Q86XR5 153 aa14.35□□□□□ -0.11
HOXC13-201ENST00000243056 FAM236DA0A1B0GTK5 79 aa14.35□□□□□ -0.11
HOXC13-201ENST00000243056 NDUFC2O95298 119 aa14.35□□□□□ -0.11
HOXC13-201ENST00000243056 FAM236CP0DP71 79 aa14.35□□□□□ -0.11
HOXC13-201ENST00000243056 TMEM243Q9BU79 118 aa14.35□□□□□ -0.11
HOXC13-201ENST00000243056 TIMM17BO60830 172 aa14.34□□□□□ -0.11
HOXC13-201ENST00000243056 HILS1P60008 231 aa14.34□□□□□ -0.11
HOXC13-201ENST00000243056 C16orf95Q9H693 158 aa14.34□□□□□ -0.11
HOXC13-201ENST00000243056 C14orf132Q9NPU4 83 aa14.34□□□□□ -0.11
HOXC13-201ENST00000243056 CD28P10747 220 aa14.33□□□□□ -0.12
HOXC13-201ENST00000243056 LINC00308Q8TCZ7 52 aa14.33□□□□□ -0.12
HOXC13-201ENST00000243056 UBE2D4Q9Y2X8 147 aa14.33□□□□□ -0.12
HOXC13-201ENST00000243056 A0A1W2PRX2 142 aa14.33□□□□□ -0.12
HOXC13-201ENST00000243056 USMG5Q96IX5 58 aa14.33□□□□□ -0.12
HOXC13-201ENST00000243056 VWFP04275 2813 aa14.33□□□□□ -0.12
HOXC13-201ENST00000243056 M0QY20 66 aa14.32□□□□□ -0.12
HOXC13-201ENST00000243056 RNASE1P07998 156 aaKnown RBP14.32□□□□□ -0.12
HOXC13-201ENST00000243056 LINC01006Q8NI28 216 aa14.32□□□□□ -0.12
HOXC13-201ENST00000243056 TRAV12-2A0A075B6T6 113 aa14.31□□□□□ -0.12
HOXC13-201ENST00000243056 F6UB75 175 aa14.31□□□□□ -0.12
HOXC13-201ENST00000243056 H3BUA1 57 aa14.31□□□□□ -0.12
HOXC13-201ENST00000243056 ZNF415Q09FC8 603 aa14.31□□□□□ -0.12
HOXC13-201ENST00000243056 SERP1Q9Y6X1 66 aa14.31□□□□□ -0.12
HOXC13-201ENST00000243056 HOXD3P31249 432 aaPredicted RBP14.3□□□□□ -0.12
HOXC13-201ENST00000243056 SOSTDC1Q6X4U4 206 aa14.3□□□□□ -0.12
HOXC13-201ENST00000243056 GHRHP01286 108 aa14.3□□□□□ -0.12
HOXC13-201ENST00000243056 SORL1Q92673 2214 aa14.29□□□□□ -0.12
HOXC13-201ENST00000243056 IGKV3-7A0A075B6H7 116 aa14.29□□□□□ -0.12
HOXC13-201ENST00000243056 A0A0U1RRA0 63 aa14.29□□□□□ -0.12
HOXC13-201ENST00000243056 CIRBPQ14011 172 aaKnown RBP14.29□□□□□ -0.12
HOXC13-201ENST00000243056 FBN1P35555 2871 aaKnown RBP14.29□□□□□ -0.12
HOXC13-201ENST00000243056 C20orf197Q8N268 126 aa14.29□□□□□ -0.12
HOXC13-201ENST00000243056 U3KQE9 123 aa14.29□□□□□ -0.12
HOXC13-201ENST00000243056 FP248Q71RG6 208 aaPredicted RBP14.28□□□□□ -0.12
HOXC13-201ENST00000243056 RPL28P46779 137 aaKnown RBP14.27□□□□□ -0.12
HOXC13-201ENST00000243056 APRG1Q8IVJ8 170 aa14.27□□□□□ -0.12
HOXC13-201ENST00000243056 TRRAPQ9Y4A5 3859 aa14.27□□□□□ -0.13
HOXC13-201ENST00000243056 V9GYY9 64 aa14.26□□□□□ -0.13
HOXC13-201ENST00000243056 NDUFA1O15239 70 aa14.25□□□□□ -0.13
HOXC13-201ENST00000243056 SLURP1P55000 103 aa14.25□□□□□ -0.13
HOXC13-201ENST00000243056 XCL1P47992 114 aa14.25□□□□□ -0.13
HOXC13-201ENST00000243056 ZNF625Q96I27 306 aaPredicted RBP14.25□□□□□ -0.13
HOXC13-201ENST00000243056 XCL2Q9UBD3 114 aa14.25□□□□□ -0.13
HOXC13-201ENST00000243056 RBMY1BA6NDE4 496 aaKnown RBP14.24□□□□□ -0.13
HOXC13-201ENST00000243056 RBMY1EA6NEQ0 496 aaKnown RBP14.24□□□□□ -0.13
HOXC13-201ENST00000243056 RBMY1DP0C7P1 496 aaKnown RBP14.24□□□□□ -0.13
HOXC13-201ENST00000243056 RBMY1A1P0DJD3 496 aaKnown RBP14.24□□□□□ -0.13
HOXC13-201ENST00000243056 RBMY1CP0DJD4 496 aa14.24□□□□□ -0.13
HOXC13-201ENST00000243056 RBMY1FQ15415 496 aaKnown RBP14.24□□□□□ -0.13
HOXC13-201ENST00000243056 WFDC9Q8NEX5 89 aa14.24□□□□□ -0.13
HOXC13-201ENST00000243056 NOTCH3Q9UM47 2321 aa14.24□□□□□ -0.13
HOXC13-201ENST00000243056 TRAV23DV6A0A075B6W5 121 aa14.24□□□□□ -0.13
HOXC13-201ENST00000243056 UBE2E2Q96LR5 201 aa14.24□□□□□ -0.13
HOXC13-201ENST00000243056 NDUFA4O00483 81 aa14.23□□□□□ -0.13
HOXC13-201ENST00000243056 A0A0U1RQV1 116 aa14.22□□□□□ -0.13
HOXC13-201ENST00000243056 H7BZZ5 65 aa14.22□□□□□ -0.13
HOXC13-201ENST00000243056 SOCS3O14543 225 aa14.22□□□□□ -0.13
HOXC13-201ENST00000243056 KRTAP10-3P60369 221 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms