RNA–Protein interactions for RNA: ENST00000234179.6

PRKD3-201, Transcript of protein kinase D3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKD3, Length 5,900 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-201ENST00000234179 FP248Q71RG6 208 aaPredicted RBP1.42□□□□□ -2.18
PRKD3-201ENST00000234179 KRTAP4-9Q9BYQ8 210 aa1.42□□□□□ -2.18
PRKD3-201ENST00000234179 TGIF2-C20orf24A0A0A6YYL0 155 aa1.41□□□□□ -2.18
PRKD3-201ENST00000234179 GRIFINA4D1Z8 144 aa1.41□□□□□ -2.18
PRKD3-201ENST00000234179 FAM74A7A6NL05 159 aa1.41□□□□□ -2.18
PRKD3-201ENST00000234179 PRSS47A8MTI9 375 aa1.41□□□□□ -2.18
PRKD3-201ENST00000234179 COX7A2LO14548 114 aa1.41□□□□□ -2.18
PRKD3-201ENST00000234179 NDUFA1O15239 70 aa1.41□□□□□ -2.18
PRKD3-201ENST00000234179 PLA2G10O15496 165 aa1.41□□□□□ -2.18
PRKD3-201ENST00000234179 PRSS2P07478 247 aa1.41□□□□□ -2.18
PRKD3-201ENST00000234179 RPL28P46779 137 aaKnown RBP1.41□□□□□ -2.18
PRKD3-201ENST00000234179 PRR4Q16378 134 aa1.41□□□□□ -2.18
PRKD3-201ENST00000234179 C15orf56Q8N910 161 aa1.41□□□□□ -2.18
PRKD3-201ENST00000234179 BRK1Q8WUW1 75 aa1.41□□□□□ -2.18
PRKD3-201ENST00000234179 CAMK2N2Q96S95 79 aa1.41□□□□□ -2.18
PRKD3-201ENST00000234179 CTDSP1Q9GZU7 261 aa1.41□□□□□ -2.18
PRKD3-201ENST00000234179 MRPL35Q9NZE8 188 aaKnown RBP1.41□□□□□ -2.18
PRKD3-201ENST00000234179 SEC61GP60059 68 aa1.41□□□□□ -2.18
PRKD3-201ENST00000234179 ALKBH7Q9BT30 221 aaPredicted RBP1.41□□□□□ -2.18
PRKD3-201ENST00000234179 SMDT1Q9H4I9 107 aa1.41□□□□□ -2.18
PRKD3-201ENST00000234179 I3L3M4 83 aa1.41□□□□□ -2.18
PRKD3-201ENST00000234179 MGPP08493 103 aa1.41□□□□□ -2.18
PRKD3-201ENST00000234179 CRYGAP11844 174 aa1.41□□□□□ -2.18
PRKD3-201ENST00000234179 PMVKQ15126 192 aa1.41□□□□□ -2.18
PRKD3-201ENST00000234179 C1orf137Q5JT78 98 aa1.41□□□□□ -2.18
PRKD3-201ENST00000234179 SUMO4Q6EEV6 95 aa1.41□□□□□ -2.18
PRKD3-201ENST00000234179 RNASEKQ6P5S7 137 aaKnown RBP1.41□□□□□ -2.18
PRKD3-201ENST00000234179 OR10AG1Q8NH19 301 aa1.41□□□□□ -2.18
PRKD3-201ENST00000234179 C11orf52Q96A22 123 aa1.41□□□□□ -2.18
PRKD3-201ENST00000234179 A0A096LNI7 61 aa1.41□□□□□ -2.18
PRKD3-201ENST00000234179 TRBV30A0A0K0K1B3 111 aa1.41□□□□□ -2.18
PRKD3-201ENST00000234179 A6NDN8 102 aa1.41□□□□□ -2.18
PRKD3-201ENST00000234179 MARVELD1Q9BSK0 173 aa1.41□□□□□ -2.18
PRKD3-201ENST00000234179 SPANXDQ9BXN6 97 aa1.41□□□□□ -2.18
PRKD3-201ENST00000234179 CNFNQ9BYD5 112 aa1.41□□□□□ -2.18
PRKD3-201ENST00000234179 TP73-AS1Q9UF72 201 aa1.41□□□□□ -2.18
PRKD3-201ENST00000234179 H0YIZ8 118 aa1.41□□□□□ -2.18
PRKD3-201ENST00000234179 IGLC6P0CF74 106 aa1.41□□□□□ -2.18
PRKD3-201ENST00000234179 LINC01547P58512 204 aaPredicted RBP1.41□□□□□ -2.18
PRKD3-201ENST00000234179 RPL32P62910 135 aaKnown RBP1.41□□□□□ -2.18
PRKD3-201ENST00000234179 NTM-AS1Q6ZSK4 140 aa1.41□□□□□ -2.18
PRKD3-201ENST00000234179 FAM213BQ8TBF2 198 aa1.41□□□□□ -2.18
PRKD3-201ENST00000234179 CST9LQ9H4G1 147 aa1.41□□□□□ -2.18
PRKD3-201ENST00000234179 NDUFA12Q9UI09 145 aa1.41□□□□□ -2.18
PRKD3-201ENST00000234179 A8MWL6 223 aa1.4□□□□□ -2.18
PRKD3-201ENST00000234179 PDE6DO43924 150 aa1.4□□□□□ -2.18
PRKD3-201ENST00000234179 CFC1BP0CG36 223 aa1.4□□□□□ -2.18
PRKD3-201ENST00000234179 CTRLP40313 264 aa1.4□□□□□ -2.18
PRKD3-201ENST00000234179 UBE2BP63146 152 aa1.4□□□□□ -2.18
PRKD3-201ENST00000234179 FABP9Q0Z7S8 132 aa1.4□□□□□ -2.18
PRKD3-201ENST00000234179 LRRC37A5PQ49AS3 106 aa1.4□□□□□ -2.18
PRKD3-201ENST00000234179 CT83Q5H943 113 aa1.4□□□□□ -2.18
PRKD3-201ENST00000234179 CST9LP1Q5W188 147 aa1.4□□□□□ -2.18
PRKD3-201ENST00000234179 FAM19A2Q8N3H0 131 aa1.4□□□□□ -2.18
PRKD3-201ENST00000234179 GNB1LQ9BYB4 327 aa1.4□□□□□ -2.18
PRKD3-201ENST00000234179 SMIM3Q9BZL3 60 aa1.4□□□□□ -2.18
PRKD3-201ENST00000234179 JPT2Q9H910 190 aa1.4□□□□□ -2.18
PRKD3-201ENST00000234179 HSPB8Q9UJY1 196 aa1.4□□□□□ -2.18
PRKD3-201ENST00000234179 FAT3Q8TDW7 4589 aa1.4□□□□□ -2.19
PRKD3-201ENST00000234179 A0A1B0GW15 77 aa1.4□□□□□ -2.19
PRKD3-201ENST00000234179 C7orf77A4D0Y5 90 aa1.4□□□□□ -2.19
PRKD3-201ENST00000234179 UPK1BO75841 260 aa1.4□□□□□ -2.19
PRKD3-201ENST00000234179 SIX6O95475 246 aa1.4□□□□□ -2.19
PRKD3-201ENST00000234179 NPSP0C0P6 89 aa1.4□□□□□ -2.19
PRKD3-201ENST00000234179 PMCHP20382 165 aa1.4□□□□□ -2.19
PRKD3-201ENST00000234179 SEC11AP67812 179 aa1.4□□□□□ -2.19
PRKD3-201ENST00000234179 FOXI1Q12951 378 aa1.4□□□□□ -2.19
PRKD3-201ENST00000234179 GAGE2BQ13066 116 aa1.4□□□□□ -2.19
PRKD3-201ENST00000234179 TPRXLQ17RH7 258 aa1.4□□□□□ -2.19
PRKD3-201ENST00000234179 KIR2DL4Q99706 377 aa1.4□□□□□ -2.19
PRKD3-201ENST00000234179 EIF5A2Q9GZV4 153 aaKnown RBP1.4□□□□□ -2.19
PRKD3-201ENST00000234179 ST20Q9HBF5 79 aa1.4□□□□□ -2.19
PRKD3-201ENST00000234179 LINC00959A0A1B0GUT2 108 aa1.4□□□□□ -2.19
PRKD3-201ENST00000234179 LINC01549A6NIU2 74 aa1.4□□□□□ -2.19
PRKD3-201ENST00000234179 VCYO14598 125 aa1.4□□□□□ -2.19
PRKD3-201ENST00000234179 CXCL5P42830 114 aa1.4□□□□□ -2.19
PRKD3-201ENST00000234179 SEC61BP60468 96 aaKnown RBP1.4□□□□□ -2.19
PRKD3-201ENST00000234179 KRTDAPP60985 99 aa1.4□□□□□ -2.19
PRKD3-201ENST00000234179 HERVK_113P61574 105 aa1.4□□□□□ -2.19
PRKD3-201ENST00000234179 SPAG11BQ08648 103 aa1.4□□□□□ -2.19
PRKD3-201ENST00000234179 PACRGQ96M98 296 aaPredicted RBP1.4□□□□□ -2.19
PRKD3-201ENST00000234179 A0A087WZ39 114 aa1.4□□□□□ -2.19
PRKD3-201ENST00000234179 TMSB15BA0A087X1C1 80 aa1.4□□□□□ -2.19
PRKD3-201ENST00000234179 A0A1B0GV72 72 aa1.4□□□□□ -2.19
PRKD3-201ENST00000234179 SCGB1D1O95968 90 aa1.4□□□□□ -2.19
PRKD3-201ENST00000234179 UBE2AP49459 152 aa1.4□□□□□ -2.19
PRKD3-201ENST00000234179 CCL20P78556 96 aa1.4□□□□□ -2.19
PRKD3-201ENST00000234179 RPL18AQ02543 176 aaKnown RBP1.4□□□□□ -2.19
PRKD3-201ENST00000234179 C9orf116Q5BN46 136 aaPredicted RBP1.4□□□□□ -2.19
PRKD3-201ENST00000234179 PAPPA-AS1Q5QFB9 102 aa1.4□□□□□ -2.19
PRKD3-201ENST00000234179 C9orf62Q8N4C0 152 aa1.4□□□□□ -2.19
PRKD3-201ENST00000234179 LYPD6BQ8NI32 183 aa1.4□□□□□ -2.19
PRKD3-201ENST00000234179 SFT2D1Q8WV19 159 aa1.4□□□□□ -2.19
PRKD3-201ENST00000234179 SDHCQ99643 169 aaPredicted RBP1.4□□□□□ -2.19
PRKD3-201ENST00000234179 ZNF861PO60384 105 aa1.39□□□□□ -2.19
PRKD3-201ENST00000234179 COX6CP09669 75 aa1.39□□□□□ -2.19
PRKD3-201ENST00000234179 NKX2-5P52952 324 aaPredicted RBP1.39□□□□□ -2.19
PRKD3-201ENST00000234179 HIGD2BQ4VC39 106 aa1.39□□□□□ -2.19
PRKD3-201ENST00000234179 KCNRGQ8N5I3 272 aa1.39□□□□□ -2.19
PRKD3-201ENST00000234179 NUP35Q8NFH5 326 aa1.39□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms