RNA–Protein interactions for RNA: ENST00000233573.6

ITGA4-201, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best)

Gene ITGA4, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-201ENST00000233573 ATP6V0E2Q8NHE4 81 aa11.13□□□□□ -0.63
ITGA4-201ENST00000233573 LITAFQ99732 161 aa11.13□□□□□ -0.63
ITGA4-201ENST00000233573 RETNQ9HD89 108 aa11.13□□□□□ -0.63
ITGA4-201ENST00000233573 CELA1Q9UNI1 258 aa11.13□□□□□ -0.63
ITGA4-201ENST00000233573 K7EP34 96 aa11.13□□□□□ -0.63
ITGA4-201ENST00000233573 NDUFA12Q9UI09 145 aa11.13□□□□□ -0.63
ITGA4-201ENST00000233573 MGAM2Q2M2H8 2515 aa11.13□□□□□ -0.63
ITGA4-201ENST00000233573 TMEM238LA0A1B0GVL6 79 aa11.12□□□□□ -0.63
ITGA4-201ENST00000233573 GAGE10A6NGK3 116 aa11.12□□□□□ -0.63
ITGA4-201ENST00000233573 A6NJY4 79 aa11.12□□□□□ -0.63
ITGA4-201ENST00000233573 K7ERU9 68 aa11.12□□□□□ -0.63
ITGA4-201ENST00000233573 VPS25Q9BRG1 176 aa11.12□□□□□ -0.63
ITGA4-201ENST00000233573 IGLV4-60A0A075B6I1 120 aa11.12□□□□□ -0.63
ITGA4-201ENST00000233573 F5H768 121 aa11.12□□□□□ -0.63
ITGA4-201ENST00000233573 SMIM1B2RUZ4 78 aa11.11□□□□□ -0.63
ITGA4-201ENST00000233573 FABP2P12104 132 aa11.1□□□□□ -0.63
ITGA4-201ENST00000233573 DAD1P61803 113 aa11.1□□□□□ -0.63
ITGA4-201ENST00000233573 GTF2H5Q6ZYL4 71 aa11.1□□□□□ -0.63
ITGA4-201ENST00000233573 CHCHD5Q9BSY4 110 aa11.1□□□□□ -0.63
ITGA4-201ENST00000233573 TMEM238C9JI98 176 aa11.1□□□□□ -0.63
ITGA4-201ENST00000233573 PAX4O43316 350 aa11.1□□□□□ -0.63
ITGA4-201ENST00000233573 SPCS1Q9Y6A9 102 aa11.09□□□□□ -0.63
ITGA4-201ENST00000233573 TENM3Q9P273 2699 aa11.09□□□□□ -0.63
ITGA4-201ENST00000233573 NDUFA1O15239 70 aa11.08□□□□□ -0.63
ITGA4-201ENST00000233573 CFC1BP0CG36 223 aa11.08□□□□□ -0.64
ITGA4-201ENST00000233573 CFC1P0CG37 223 aa11.08□□□□□ -0.64
ITGA4-201ENST00000233573 SPART-AS1P0CW21 52 aa11.08□□□□□ -0.64
ITGA4-201ENST00000233573 ADAMTSL4-AS1Q5T5F5 129 aa11.08□□□□□ -0.64
ITGA4-201ENST00000233573 ATP5G1P05496 136 aa11.07□□□□□ -0.64
ITGA4-201ENST00000233573 MUSTN1Q8IVN3 82 aa11.07□□□□□ -0.64
ITGA4-201ENST00000233573 EIF4EBP3O60516 100 aaPredicted RBP11.07□□□□□ -0.64
ITGA4-201ENST00000233573 A0A1B0GUV1 79 aa11.06□□□□□ -0.64
ITGA4-201ENST00000233573 SPANXDQ9BXN6 97 aa11.06□□□□□ -0.64
ITGA4-201ENST00000233573 PGPEP1Q9NXJ5 209 aa11.06□□□□□ -0.64
ITGA4-201ENST00000233573 SPANXCQ9NY87 97 aa11.06□□□□□ -0.64
ITGA4-201ENST00000233573 A4D1N5 150 aa11.05□□□□□ -0.64
ITGA4-201ENST00000233573 TIMM17BO60830 172 aa11.05□□□□□ -0.64
ITGA4-201ENST00000233573 A0A096LPF7 62 aa11.05□□□□□ -0.64
ITGA4-201ENST00000233573 APOMO95445 188 aa11.05□□□□□ -0.64
ITGA4-201ENST00000233573 TRAV26-1A0A087WT03 109 aa11.04□□□□□ -0.64
ITGA4-201ENST00000233573 TSPAN13O95857 204 aa11.04□□□□□ -0.64
ITGA4-201ENST00000233573 RPL24P83731 157 aaKnown RBP11.04□□□□□ -0.64
ITGA4-201ENST00000233573 ZNF625Q96I27 306 aaPredicted RBP11.04□□□□□ -0.64
ITGA4-201ENST00000233573 IGHV3OR16-9A0A0B4J2B5 98 aa11.03□□□□□ -0.64
ITGA4-201ENST00000233573 K7EIL1 84 aa11.03□□□□□ -0.64
ITGA4-201ENST00000233573 MIAQ16674 131 aa11.03□□□□□ -0.64
ITGA4-201ENST00000233573 Q9H8V8 135 aa11.03□□□□□ -0.64
ITGA4-201ENST00000233573 DNHD1Q96M86 4753 aa11.02□□□□□ -0.65
ITGA4-201ENST00000233573 LINC00959A0A1B0GUT2 108 aa11.02□□□□□ -0.65
ITGA4-201ENST00000233573 A0A0B4J2C4 111 aa11.01□□□□□ -0.65
ITGA4-201ENST00000233573 IGKV3OR2-268A0A0C4DH90 116 aa11.01□□□□□ -0.65
ITGA4-201ENST00000233573 PRO1854Q9UHT4 67 aa11.01□□□□□ -0.65
ITGA4-201ENST00000233573 HUWE1Q7Z6Z7 4374 aaKnown RBP11.01□□□□□ -0.65
ITGA4-201ENST00000233573 TEX48A0A1B0GUV7 120 aa11□□□□□ -0.65
ITGA4-201ENST00000233573 TMEM262E9PQX1 116 aa11□□□□□ -0.65
ITGA4-201ENST00000233573 HTN3P15516 51 aa11□□□□□ -0.65
ITGA4-201ENST00000233573 A0A087WZ39 114 aa10.99□□□□□ -0.65
ITGA4-201ENST00000233573 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.99□□□□□ -0.65
ITGA4-201ENST00000233573 PRSS2P07478 247 aa10.99□□□□□ -0.65
ITGA4-201ENST00000233573 MRPL23Q16540 153 aaKnown RBP10.99□□□□□ -0.65
ITGA4-201ENST00000233573 DEFB121Q5J5C9 76 aa10.99□□□□□ -0.65
ITGA4-201ENST00000233573 KPRPQ5T749 579 aaPredicted RBP10.99□□□□□ -0.65
ITGA4-201ENST00000233573 MRAPQ8TCY5 172 aa10.99□□□□□ -0.65
ITGA4-201ENST00000233573 IGHV3-33P01772 117 aa10.97□□□□□ -0.65
ITGA4-201ENST00000233573 IFITM1P13164 125 aa10.97□□□□□ -0.65
ITGA4-201ENST00000233573 HERV-K104P63124 156 aa10.97□□□□□ -0.65
ITGA4-201ENST00000233573 DAND5Q8N907 189 aa10.97□□□□□ -0.65
ITGA4-201ENST00000233573 COX7B2Q8TF08 81 aa10.97□□□□□ -0.65
ITGA4-201ENST00000233573 ICOSQ9Y6W8 199 aa10.97□□□□□ -0.65
ITGA4-201ENST00000233573 CIRBPQ14011 172 aaKnown RBP10.96□□□□□ -0.65
ITGA4-201ENST00000233573 SH2D6Q7Z4S9 175 aa10.96□□□□□ -0.65
ITGA4-201ENST00000233573 Q8N3U1 123 aa10.96□□□□□ -0.65
ITGA4-201ENST00000233573 C11orf68Q9H3H3 251 aaKnown RBP10.96□□□□□ -0.65
ITGA4-201ENST00000233573 A0A0J9YWU9 116 aa10.96□□□□□ -0.66
ITGA4-201ENST00000233573 H3BMG7 143 aa10.95□□□□□ -0.66
ITGA4-201ENST00000233573 NPC2P61916 151 aa10.95□□□□□ -0.66
ITGA4-201ENST00000233573 SS18Q15532 418 aa10.94□□□□□ -0.66
ITGA4-201ENST00000233573 LELP1Q5T871 98 aa10.94□□□□□ -0.66
ITGA4-201ENST00000233573 C5orf38Q86SI9 138 aa10.94□□□□□ -0.66
ITGA4-201ENST00000233573 SFTA2Q6UW10 78 aa10.94□□□□□ -0.66
ITGA4-201ENST00000233573 LINC00308Q8TCZ7 52 aa10.94□□□□□ -0.66
ITGA4-201ENST00000233573 CLPSL2Q6UWE3 100 aa10.93□□□□□ -0.66
ITGA4-201ENST00000233573 LINC00269Q8N2A0 174 aa10.93□□□□□ -0.66
ITGA4-201ENST00000233573 PRO0461Q9UI25 63 aa10.93□□□□□ -0.66
ITGA4-201ENST00000233573 DNAH9Q9NYC9 4486 aa10.93□□□□□ -0.66
ITGA4-201ENST00000233573 LOC107984156A0A0G2JMH3 177 aa10.93□□□□□ -0.66
ITGA4-201ENST00000233573 SOSTDC1Q6X4U4 206 aa10.93□□□□□ -0.66
ITGA4-201ENST00000233573 ARL17AQ8IVW1 177 aa10.93□□□□□ -0.66
ITGA4-201ENST00000233573 ERG28Q9UKR5 140 aa10.93□□□□□ -0.66
ITGA4-201ENST00000233573 H3BNG1 76 aa10.92□□□□□ -0.66
ITGA4-201ENST00000233573 XCL1P47992 114 aa10.92□□□□□ -0.66
ITGA4-201ENST00000233573 Q6ZTC4 211 aa10.92□□□□□ -0.66
ITGA4-201ENST00000233573 F8W1H4 67 aa10.91□□□□□ -0.66
ITGA4-201ENST00000233573 LINC01561Q8N1V8 128 aa10.91□□□□□ -0.66
ITGA4-201ENST00000233573 PPDPFQ9H3Y8 114 aa10.91□□□□□ -0.66
ITGA4-201ENST00000233573 A0A0U1RRA0 63 aa10.91□□□□□ -0.66
ITGA4-201ENST00000233573 MEIG1Q5JSS6 88 aa10.91□□□□□ -0.66
ITGA4-201ENST00000233573 LYPD5Q6UWN5 251 aa10.91□□□□□ -0.66
ITGA4-201ENST00000233573 TM2D3Q9BRN9 247 aa10.91□□□□□ -0.66
ITGA4-201ENST00000233573 TOMM7Q9P0U1 55 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms