RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 PTPRSQ13332 1948 aa9.71□□□□□ -0.85
NEK4-201ENST00000233027 ZNF580Q9UK33 172 aa9.71□□□□□ -0.85
NEK4-201ENST00000233027 EML5Q05BV3 1969 aa9.71□□□□□ -0.86
NEK4-201ENST00000233027 M0R2N4 97 aa9.71□□□□□ -0.86
NEK4-201ENST00000233027 C9orf116Q5BN46 136 aaPredicted RBP9.71□□□□□ -0.86
NEK4-201ENST00000233027 ZNF73O43830 326 aaPredicted RBP9.71□□□□□ -0.86
NEK4-201ENST00000233027 LINC00242Q5T6M2 205 aa9.71□□□□□ -0.86
NEK4-201ENST00000233027 AVPP01185 164 aa9.7□□□□□ -0.86
NEK4-201ENST00000233027 ZNF843Q8N446 348 aa9.7□□□□□ -0.86
NEK4-201ENST00000233027 DHRS4-AS1Q9P1J3 65 aa9.7□□□□□ -0.86
NEK4-201ENST00000233027 A0A087WYN8 130 aa9.69□□□□□ -0.86
NEK4-201ENST00000233027 PRR3P79522 188 aaKnown RBP9.69□□□□□ -0.86
NEK4-201ENST00000233027 CHCHD7Q9BUK0 85 aa9.69□□□□□ -0.86
NEK4-201ENST00000233027 COX17Q14061 63 aa9.69□□□□□ -0.86
NEK4-201ENST00000233027 IGLV9-49A0A0B4J1Y8 123 aa9.69□□□□□ -0.86
NEK4-201ENST00000233027 CYSRT1A8MQ03 144 aa9.69□□□□□ -0.86
NEK4-201ENST00000233027 Q6JHZ5 121 aa9.69□□□□□ -0.86
NEK4-201ENST00000233027 Q8IZM0 81 aa9.69□□□□□ -0.86
NEK4-201ENST00000233027 TRAV10A0A0B4J240 114 aa9.68□□□□□ -0.86
NEK4-201ENST00000233027 FAM208BQ5VWN6 2430 aa9.68□□□□□ -0.86
NEK4-201ENST00000233027 A0A087WVE0 104 aa9.68□□□□□ -0.86
NEK4-201ENST00000233027 KIR2DL5BQ8NHK3 375 aa9.68□□□□□ -0.86
NEK4-201ENST00000233027 CELA1Q9UNI1 258 aa9.68□□□□□ -0.86
NEK4-201ENST00000233027 ADAMTSL4-AS1Q5T5F5 129 aa9.68□□□□□ -0.86
NEK4-201ENST00000233027 ARHGAP32A7KAX9 2087 aa9.67□□□□□ -0.86
NEK4-201ENST00000233027 SMIM1B2RUZ4 78 aa9.67□□□□□ -0.86
NEK4-201ENST00000233027 NDUFC1O43677 76 aa9.67□□□□□ -0.86
NEK4-201ENST00000233027 NANOS2P60321 138 aaKnown RBP9.67□□□□□ -0.86
NEK4-201ENST00000233027 MRPL55Q7Z7F7 128 aaKnown RBP9.67□□□□□ -0.86
NEK4-201ENST00000233027 IGHV4-30-4P0DP06 118 aa9.67□□□□□ -0.86
NEK4-201ENST00000233027 IL17DQ8TAD2 202 aa9.67□□□□□ -0.86
NEK4-201ENST00000233027 ATP5EP56381 51 aaPredicted RBP9.67□□□□□ -0.86
NEK4-201ENST00000233027 UNQ6190/PRO20217Q6UXQ8 127 aa9.66□□□□□ -0.86
NEK4-201ENST00000233027 LRP4O75096 1905 aa9.66□□□□□ -0.86
NEK4-201ENST00000233027 A0A096LNJ9 63 aa9.66□□□□□ -0.86
NEK4-201ENST00000233027 CPAMD8Q8IZJ3 1885 aa9.66□□□□□ -0.86
NEK4-201ENST00000233027 PTPRQQ9UMZ3 2332 aa9.66□□□□□ -0.86
NEK4-201ENST00000233027 IGLV4-60A0A075B6I1 120 aa9.65□□□□□ -0.86
NEK4-201ENST00000233027 PRO3102Q9H379 93 aa9.65□□□□□ -0.87
NEK4-201ENST00000233027 LOC107984640A0A0U1RRK4 108 aa9.64□□□□□ -0.87
NEK4-201ENST00000233027 MRGPRG-AS1Q2M3A8 158 aa9.64□□□□□ -0.87
NEK4-201ENST00000233027 ODF3L2Q3SX64 289 aa9.64□□□□□ -0.87
NEK4-201ENST00000233027 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.64□□□□□ -0.87
NEK4-201ENST00000233027 Q8N814 137 aa9.64□□□□□ -0.87
NEK4-201ENST00000233027 A6NED7 52 aa9.64□□□□□ -0.87
NEK4-201ENST00000233027 NTM-AS1Q6ZSK4 140 aa9.64□□□□□ -0.87
NEK4-201ENST00000233027 RAI1Q7Z5J4 1906 aaPredicted RBP9.64□□□□□ -0.87
NEK4-201ENST00000233027 PLAC8L1A1L4L8 177 aa9.64□□□□□ -0.87
NEK4-201ENST00000233027 Q6ZSN1 163 aa9.63□□□□□ -0.87
NEK4-201ENST00000233027 SHISA2Q6UWI4 295 aa9.62□□□□□ -0.87
NEK4-201ENST00000233027 TRBV10-3A0A0K0K1G6 114 aa9.62□□□□□ -0.87
NEK4-201ENST00000233027 Q6Q795 121 aa9.62□□□□□ -0.87
NEK4-201ENST00000233027 V9GYY9 64 aa9.62□□□□□ -0.87
NEK4-201ENST00000233027 RETNQ9HD89 108 aa9.62□□□□□ -0.87
NEK4-201ENST00000233027 MUC6Q6W4X9 2439 aa9.61□□□□□ -0.87
NEK4-201ENST00000233027 SMR3AQ99954 134 aa9.61□□□□□ -0.87
NEK4-201ENST00000233027 PRR15LQ9BU68 103 aa9.61□□□□□ -0.87
NEK4-201ENST00000233027 OXLD1Q5BKU9 147 aa9.61□□□□□ -0.87
NEK4-201ENST00000233027 RPL28P46779 137 aaKnown RBP9.6□□□□□ -0.87
NEK4-201ENST00000233027 C7orf33Q8WU49 177 aa9.6□□□□□ -0.87
NEK4-201ENST00000233027 WNK1Q9H4A3 2382 aa9.6□□□□□ -0.87
NEK4-201ENST00000233027 M0QXV9 152 aa9.6□□□□□ -0.87
NEK4-201ENST00000233027 SOSTDC1Q6X4U4 206 aa9.6□□□□□ -0.87
NEK4-201ENST00000233027 ANKHD1Q8IWZ3 2542 aaKnown RBP9.6□□□□□ -0.87
NEK4-201ENST00000233027 C6orf223Q8N319 242 aa9.59□□□□□ -0.87
NEK4-201ENST00000233027 C10orf142B7Z368 130 aa9.59□□□□□ -0.88
NEK4-201ENST00000233027 AMELXQ99217 191 aa9.59□□□□□ -0.88
NEK4-201ENST00000233027 HIVEP2P31629 2446 aa9.58□□□□□ -0.88
NEK4-201ENST00000233027 Q8N9L7 120 aa9.58□□□□□ -0.88
NEK4-201ENST00000233027 ZNF706Q9Y5V0 76 aaPredicted RBP9.58□□□□□ -0.88
NEK4-201ENST00000233027 FHL2Q14192 279 aa9.57□□□□□ -0.88
NEK4-201ENST00000233027 TRAV7A0A075B6U4 112 aa9.57□□□□□ -0.88
NEK4-201ENST00000233027 KRTAP10-9P60411 292 aa9.57□□□□□ -0.88
NEK4-201ENST00000233027 C10orf25Q5T742 122 aa9.56□□□□□ -0.88
NEK4-201ENST00000233027 C1orf137Q5JT78 98 aa9.56□□□□□ -0.88
NEK4-201ENST00000233027 PLA2G2AP14555 144 aa9.55□□□□□ -0.88
NEK4-201ENST00000233027 K7ERS5 55 aa9.55□□□□□ -0.88
NEK4-201ENST00000233027 COX8CQ7Z4L0 72 aa9.55□□□□□ -0.88
NEK4-201ENST00000233027 SPG11Q96JI7 2443 aa9.55□□□□□ -0.88
NEK4-201ENST00000233027 BRI3O95415 125 aa9.54□□□□□ -0.88
NEK4-201ENST00000233027 C1orf195Q5TG92 126 aa9.54□□□□□ -0.88
NEK4-201ENST00000233027 A8MTW9 85 aa9.54□□□□□ -0.88
NEK4-201ENST00000233027 A0A1W2PPR1 153 aa9.54□□□□□ -0.88
NEK4-201ENST00000233027 ESRGQ1W209 222 aa9.54□□□□□ -0.88
NEK4-201ENST00000233027 SMIM26A0A096LP01 95 aa9.53□□□□□ -0.88
NEK4-201ENST00000233027 LY6G6CO95867 125 aa9.53□□□□□ -0.88
NEK4-201ENST00000233027 REG3GQ6UW15 175 aa9.53□□□□□ -0.88
NEK4-201ENST00000233027 LINC00208Q96KT6 92 aa9.53□□□□□ -0.88
NEK4-201ENST00000233027 SERP1Q9Y6X1 66 aa9.53□□□□□ -0.88
NEK4-201ENST00000233027 EXPH5Q8NEV8 1989 aa9.53□□□□□ -0.88
NEK4-201ENST00000233027 EGFEM1PQ0D2K5 195 aa9.53□□□□□ -0.88
NEK4-201ENST00000233027 MUC7Q8TAX7 377 aa9.52□□□□□ -0.89
NEK4-201ENST00000233027 NAV3Q8IVL0 2385 aa9.52□□□□□ -0.89
NEK4-201ENST00000233027 IGLV1-51P01701 117 aa9.52□□□□□ -0.89
NEK4-201ENST00000233027 DEFB116Q30KQ4 102 aa9.52□□□□□ -0.89
NEK4-201ENST00000233027 SORL1Q92673 2214 aa9.52□□□□□ -0.89
NEK4-201ENST00000233027 PRYO14603 147 aa9.51□□□□□ -0.89
NEK4-201ENST00000233027 Q8N3U1 123 aa9.51□□□□□ -0.89
NEK4-201ENST00000233027 RETNLBQ9BQ08 111 aa9.51□□□□□ -0.89
NEK4-201ENST00000233027 COL5A1P20908 1838 aaPredicted RBP9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms