RNA–Protein interactions for RNA: ENST00000229387.6

RFX4-201, Transcript of regulatory factor X4, humanhuman

TSL 1 (best) BASIC

Gene RFX4, Length 3,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-201ENST00000229387 KAAG1Q9UBP8 84 aa4.14□□□□□ -1.75
RFX4-201ENST00000229387 K7EMT4 169 aa4.14□□□□□ -1.75
RFX4-201ENST00000229387 M0R378 163 aa4.14□□□□□ -1.75
RFX4-201ENST00000229387 IGKV1-17P01599 117 aa4.14□□□□□ -1.75
RFX4-201ENST00000229387 PRR26Q8N8Z3 221 aa4.14□□□□□ -1.75
RFX4-201ENST00000229387 MPLKIPQ8TAP9 179 aa4.14□□□□□ -1.75
RFX4-201ENST00000229387 OVOL2Q9BRP0 275 aa4.14□□□□□ -1.75
RFX4-201ENST00000229387 LY6EQ16553 131 aa4.13□□□□□ -1.75
RFX4-201ENST00000229387 DEFB104AQ8WTQ1 72 aa4.13□□□□□ -1.75
RFX4-201ENST00000229387 LINC00588Q9Y4M8 146 aa4.13□□□□□ -1.75
RFX4-201ENST00000229387 SORL1Q92673 2214 aa4.13□□□□□ -1.75
RFX4-201ENST00000229387 IGSF10Q6WRI0 2623 aa4.13□□□□□ -1.75
RFX4-201ENST00000229387 TRAV23DV6A0A075B6W5 121 aa4.13□□□□□ -1.75
RFX4-201ENST00000229387 ERC2-IT1O76042 136 aa4.13□□□□□ -1.75
RFX4-201ENST00000229387 TRGV3P03979 118 aa4.13□□□□□ -1.75
RFX4-201ENST00000229387 MIFP14174 115 aa4.13□□□□□ -1.75
RFX4-201ENST00000229387 NOTCH2Q04721 2471 aa4.13□□□□□ -1.75
RFX4-201ENST00000229387 IGHV1-69P01742 117 aa4.13□□□□□ -1.75
RFX4-201ENST00000229387 RNASE4P34096 147 aaKnown RBP4.13□□□□□ -1.75
RFX4-201ENST00000229387 DEFB1P60022 68 aa4.13□□□□□ -1.75
RFX4-201ENST00000229387 PHF5AQ7RTV0 110 aaKnown RBP4.13□□□□□ -1.75
RFX4-201ENST00000229387 C11orf68Q9H3H3 251 aaKnown RBP4.13□□□□□ -1.75
RFX4-201ENST00000229387 C8orf87E5RJ46 101 aa4.12□□□□□ -1.75
RFX4-201ENST00000229387 H3BRN7 92 aa4.12□□□□□ -1.75
RFX4-201ENST00000229387 K7EIM0 57 aa4.12□□□□□ -1.75
RFX4-201ENST00000229387 DYNLRB2Q8TF09 96 aa4.12□□□□□ -1.75
RFX4-201ENST00000229387 RMI2Q96E14 147 aa4.12□□□□□ -1.75
RFX4-201ENST00000229387 I3L2K1 104 aa4.12□□□□□ -1.75
RFX4-201ENST00000229387 NAV2Q8IVL1 2488 aa4.12□□□□□ -1.75
RFX4-201ENST00000229387 Q6ZVQ6 151 aa4.11□□□□□ -1.75
RFX4-201ENST00000229387 IGHV3-11P01762 117 aa4.11□□□□□ -1.75
RFX4-201ENST00000229387 PRRC2AP48634 2157 aaKnown RBP4.11□□□□□ -1.75
RFX4-201ENST00000229387 WNK1Q9H4A3 2382 aa4.11□□□□□ -1.75
RFX4-201ENST00000229387 IGHV7-4-1A0A0J9YVY3 117 aa4.11□□□□□ -1.75
RFX4-201ENST00000229387 CLEC19AQ6UXS0 136 aa4.11□□□□□ -1.75
RFX4-201ENST00000229387 SOSTDC1Q6X4U4 206 aa4.11□□□□□ -1.75
RFX4-201ENST00000229387 MYO9AB2RTY4 2548 aa4.1□□□□□ -1.75
RFX4-201ENST00000229387 TRBV7-4A0A0J9YYF1 115 aa4.1□□□□□ -1.75
RFX4-201ENST00000229387 ATP6V0E1O15342 81 aa4.1□□□□□ -1.75
RFX4-201ENST00000229387 SPANXN1Q5VSR9 72 aa4.1□□□□□ -1.75
RFX4-201ENST00000229387 Q6ZSV7 163 aa4.1□□□□□ -1.75
RFX4-201ENST00000229387 NACAE9PAV3 2078 aa4.1□□□□□ -1.75
RFX4-201ENST00000229387 SOCS3O14543 225 aa4.1□□□□□ -1.75
RFX4-201ENST00000229387 RNASE1P07998 156 aaKnown RBP4.1□□□□□ -1.75
RFX4-201ENST00000229387 UBE2BP63146 152 aa4.1□□□□□ -1.75
RFX4-201ENST00000229387 C15orf32Q32M92 178 aa4.1□□□□□ -1.75
RFX4-201ENST00000229387 TRAV12-3A0A0B4J271 114 aa4.1□□□□□ -1.75
RFX4-201ENST00000229387 C11orf71Q6IPW1 123 aa4.1□□□□□ -1.75
RFX4-201ENST00000229387 ITLN2Q8WWU7 325 aaPredicted RBP4.1□□□□□ -1.75
RFX4-201ENST00000229387 FBN2P35556 2912 aa4.09□□□□□ -1.75
RFX4-201ENST00000229387 IGHV7-81A0A0B4J1V7 117 aa4.09□□□□□ -1.75
RFX4-201ENST00000229387 IGHV3-30-3P0DP02 117 aa4.09□□□□□ -1.75
RFX4-201ENST00000229387 S100A4P26447 101 aaKnown RBP4.09□□□□□ -1.75
RFX4-201ENST00000229387 Q6ZTC4 211 aa4.09□□□□□ -1.75
RFX4-201ENST00000229387 SPATA3Q8NHX4 192 aa4.09□□□□□ -1.75
RFX4-201ENST00000229387 PHLDA3Q9Y5J5 127 aa4.09□□□□□ -1.75
RFX4-201ENST00000229387 SNURFQ9Y675 71 aa4.09□□□□□ -1.75
RFX4-201ENST00000229387 C2CD3Q4AC94 2353 aa4.09□□□□□ -1.75
RFX4-201ENST00000229387 IGKV3D-20A0A0C4DH25 116 aa4.09□□□□□ -1.76
RFX4-201ENST00000229387 IGHV4-61A0A0C4DH41 118 aa4.09□□□□□ -1.76
RFX4-201ENST00000229387 PRAC2D3DTV9 90 aa4.09□□□□□ -1.76
RFX4-201ENST00000229387 MGPP08493 103 aa4.09□□□□□ -1.76
RFX4-201ENST00000229387 CD28P10747 220 aa4.09□□□□□ -1.76
RFX4-201ENST00000229387 LCE2CQ5TA81 110 aa4.09□□□□□ -1.76
RFX4-201ENST00000229387 C14orf132Q9NPU4 83 aa4.09□□□□□ -1.76
RFX4-201ENST00000229387 IGHV4OR15-8A0A075B7B6 117 aa4.08□□□□□ -1.76
RFX4-201ENST00000229387 A0A087WW49 117 aa4.08□□□□□ -1.76
RFX4-201ENST00000229387 UBE2L6O14933 153 aa4.08□□□□□ -1.76
RFX4-201ENST00000229387 IGHV4-38-2P0DP08 117 aa4.08□□□□□ -1.76
RFX4-201ENST00000229387 ENHOQ6UWT2 76 aa4.08□□□□□ -1.76
RFX4-201ENST00000229387 GPHB5Q86YW7 130 aa4.08□□□□□ -1.76
RFX4-201ENST00000229387 ACANP16112 2415 aa4.08□□□□□ -1.76
RFX4-201ENST00000229387 DOPEY1Q5JWR5 2465 aa4.08□□□□□ -1.76
RFX4-201ENST00000229387 ZNF73O43830 326 aaPredicted RBP4.08□□□□□ -1.76
RFX4-201ENST00000229387 CTSGP08311 255 aa4.08□□□□□ -1.76
RFX4-201ENST00000229387 FBXL19-AS1Q494R0 122 aa4.08□□□□□ -1.76
RFX4-201ENST00000229387 Q8N9W7 124 aa4.08□□□□□ -1.76
RFX4-201ENST00000229387 LMO4P61968 165 aa4.08□□□□□ -1.76
RFX4-201ENST00000229387 FAM218AQ96MZ4 157 aa4.08□□□□□ -1.76
RFX4-201ENST00000229387 ABCA2Q9BZC7 2435 aa4.08□□□□□ -1.76
RFX4-201ENST00000229387 MTORP42345 2549 aa4.07□□□□□ -1.76
RFX4-201ENST00000229387 POLR2KP53803 58 aaKnown RBP4.07□□□□□ -1.76
RFX4-201ENST00000229387 C10orf99Q6UWK7 81 aa4.07□□□□□ -1.76
RFX4-201ENST00000229387 Q6ZRP5 223 aa4.07□□□□□ -1.76
RFX4-201ENST00000229387 IGLV11-55A0A075B6I3 123 aa4.07□□□□□ -1.76
RFX4-201ENST00000229387 IGHV4-30-2A0A087WSY4 118 aa4.07□□□□□ -1.76
RFX4-201ENST00000229387 hDV103S1A0JD37 113 aa4.07□□□□□ -1.76
RFX4-201ENST00000229387 ODF3BA8MYP8 253 aa4.07□□□□□ -1.76
RFX4-201ENST00000229387 TMEM256-PLSCR3K7ERE1 68 aa4.07□□□□□ -1.76
RFX4-201ENST00000229387 RPL39LQ96EH5 51 aaKnown RBP4.07□□□□□ -1.76
RFX4-201ENST00000229387 NDUFA12Q9UI09 145 aa4.07□□□□□ -1.76
RFX4-201ENST00000229387 USP24Q9UPU5 2620 aa4.07□□□□□ -1.76
RFX4-201ENST00000229387 F6UB75 175 aa4.06□□□□□ -1.76
RFX4-201ENST00000229387 MED14OSP0DP75 135 aa4.06□□□□□ -1.76
RFX4-201ENST00000229387 PIK3CD-AS1Q5SR53 167 aa4.06□□□□□ -1.76
RFX4-201ENST00000229387 ZNF625Q96I27 306 aaPredicted RBP4.06□□□□□ -1.76
RFX4-201ENST00000229387 OPRPNQ99935 248 aaPredicted RBP4.06□□□□□ -1.76
RFX4-201ENST00000229387 SMAD5-AS1Q9Y6J3 95 aa4.06□□□□□ -1.76
RFX4-201ENST00000229387 A0A087WZ39 114 aa4.06□□□□□ -1.76
RFX4-201ENST00000229387 H3BUX3 64 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms