RNA–Protein interactions for RNA: ENST00000229239.9

GAPDH-201, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GAPDH, Length 1,875 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-201ENST00000229239 COPS9Q8WXC6 57 aa11.9□□□□□ -0.5
GAPDH-201ENST00000229239 A4D1N5 150 aa11.89□□□□□ -0.51
GAPDH-201ENST00000229239 MUSTN1Q8IVN3 82 aa11.89□□□□□ -0.51
GAPDH-201ENST00000229239 X6R8D5 127 aa11.89□□□□□ -0.51
GAPDH-201ENST00000229239 LYRM9A8MSI8 78 aa11.89□□□□□ -0.51
GAPDH-201ENST00000229239 LITAFQ99732 161 aa11.89□□□□□ -0.51
GAPDH-201ENST00000229239 TRBV6-8A0A0A6YYG3 113 aa11.88□□□□□ -0.51
GAPDH-201ENST00000229239 MIAQ16674 131 aa11.88□□□□□ -0.51
GAPDH-201ENST00000229239 WIPF1O43516 503 aa11.87□□□□□ -0.51
GAPDH-201ENST00000229239 LOC100131303A0A0U1RQF7 123 aa11.87□□□□□ -0.51
GAPDH-201ENST00000229239 H3BMG7 143 aa11.87□□□□□ -0.51
GAPDH-201ENST00000229239 WFDC9Q8NEX5 89 aa11.87□□□□□ -0.51
GAPDH-201ENST00000229239 LOC107984156A0A0G2JMH3 177 aa11.86□□□□□ -0.51
GAPDH-201ENST00000229239 COX6A2Q02221 97 aa11.86□□□□□ -0.51
GAPDH-201ENST00000229239 ARL17AQ8IVW1 177 aa11.86□□□□□ -0.51
GAPDH-201ENST00000229239 ERG28Q9UKR5 140 aa11.86□□□□□ -0.51
GAPDH-201ENST00000229239 PPDPFQ9H3Y8 114 aa11.85□□□□□ -0.51
GAPDH-201ENST00000229239 TRAV13-1A0A0B4J241 112 aa11.85□□□□□ -0.51
GAPDH-201ENST00000229239 J3QR89 54 aa11.85□□□□□ -0.51
GAPDH-201ENST00000229239 PRSS2P07478 247 aa11.85□□□□□ -0.51
GAPDH-201ENST00000229239 DEFB130BP0DP73 79 aa11.85□□□□□ -0.51
GAPDH-201ENST00000229239 DEFB130AP0DP74 79 aa11.85□□□□□ -0.51
GAPDH-201ENST00000229239 HERV-K104P63124 156 aa11.85□□□□□ -0.51
GAPDH-201ENST00000229239 PRO0255Q9UI72 69 aa11.85□□□□□ -0.51
GAPDH-201ENST00000229239 SMIM1B2RUZ4 78 aa11.84□□□□□ -0.51
GAPDH-201ENST00000229239 G3V4G9 280 aa11.84□□□□□ -0.51
GAPDH-201ENST00000229239 IGHV3-33P01772 117 aa11.84□□□□□ -0.51
GAPDH-201ENST00000229239 NOTCH3Q9UM47 2321 aa11.83□□□□□ -0.52
GAPDH-201ENST00000229239 PRO0461Q9UI25 63 aa11.83□□□□□ -0.52
GAPDH-201ENST00000229239 PRKDCP78527 4128 aaKnown RBP11.82□□□□□ -0.52
GAPDH-201ENST00000229239 ATP6V0E2Q8NHE4 81 aa11.82□□□□□ -0.52
GAPDH-201ENST00000229239 VPS25Q9BRG1 176 aa11.82□□□□□ -0.52
GAPDH-201ENST00000229239 TGP01266 2768 aa11.81□□□□□ -0.52
GAPDH-201ENST00000229239 A8MZ25 164 aa11.81□□□□□ -0.52
GAPDH-201ENST00000229239 F5H768 121 aa11.81□□□□□ -0.52
GAPDH-201ENST00000229239 SCGB1C2P0DMR2 95 aa11.81□□□□□ -0.52
GAPDH-201ENST00000229239 RNF151Q2KHN1 245 aa11.81□□□□□ -0.52
GAPDH-201ENST00000229239 CHCHD5Q9BSY4 110 aa11.81□□□□□ -0.52
GAPDH-201ENST00000229239 PSMB2P49721 201 aa11.8□□□□□ -0.52
GAPDH-201ENST00000229239 ADAMTSL4-AS1Q5T5F5 129 aa11.8□□□□□ -0.52
GAPDH-201ENST00000229239 MIFP14174 115 aa11.8□□□□□ -0.52
GAPDH-201ENST00000229239 GYPEP15421 78 aa11.8□□□□□ -0.52
GAPDH-201ENST00000229239 GAGE6Q13070 117 aa11.8□□□□□ -0.52
GAPDH-201ENST00000229239 WFDC2Q14508 124 aa11.8□□□□□ -0.52
GAPDH-201ENST00000229239 FAM222AQ5U5X8 452 aa11.8□□□□□ -0.52
GAPDH-201ENST00000229239 SFTA2Q6UW10 78 aa11.8□□□□□ -0.52
GAPDH-201ENST00000229239 Q9H8V8 135 aa11.8□□□□□ -0.52
GAPDH-201ENST00000229239 TRBV30A0A0K0K1B3 111 aa11.79□□□□□ -0.52
GAPDH-201ENST00000229239 A0A1B0GUV1 79 aa11.79□□□□□ -0.52
GAPDH-201ENST00000229239 EIF4EBP3O60516 100 aaPredicted RBP11.78□□□□□ -0.52
GAPDH-201ENST00000229239 OXLD1Q5BKU9 147 aa11.78□□□□□ -0.52
GAPDH-201ENST00000229239 ZNF625Q96I27 306 aaPredicted RBP11.78□□□□□ -0.52
GAPDH-201ENST00000229239 M0QXV9 152 aa11.77□□□□□ -0.53
GAPDH-201ENST00000229239 DEFB135Q30KP9 77 aa11.77□□□□□ -0.53
GAPDH-201ENST00000229239 DNAH3Q8TD57 4116 aa11.77□□□□□ -0.53
GAPDH-201ENST00000229239 Q1RN00 199 aa11.76□□□□□ -0.53
GAPDH-201ENST00000229239 TEX48A0A1B0GUV7 120 aa11.76□□□□□ -0.53
GAPDH-201ENST00000229239 PAX4O43316 350 aa11.76□□□□□ -0.53
GAPDH-201ENST00000229239 TCL1BO95988 128 aa11.76□□□□□ -0.53
GAPDH-201ENST00000229239 COX6CP09669 75 aa11.76□□□□□ -0.53
GAPDH-201ENST00000229239 KPRPQ5T749 579 aaPredicted RBP11.76□□□□□ -0.53
GAPDH-201ENST00000229239 IGLV4-60A0A075B6I1 120 aa11.75□□□□□ -0.53
GAPDH-201ENST00000229239 TRAV26-1A0A087WT03 109 aa11.75□□□□□ -0.53
GAPDH-201ENST00000229239 IGHV4-28A0A0C4DH34 117 aa11.75□□□□□ -0.53
GAPDH-201ENST00000229239 SH2D6Q7Z4S9 175 aa11.74□□□□□ -0.53
GAPDH-201ENST00000229239 LINC01561Q8N1V8 128 aa11.74□□□□□ -0.53
GAPDH-201ENST00000229239 LINC00308Q8TCZ7 52 aa11.74□□□□□ -0.53
GAPDH-201ENST00000229239 A0A087WZ39 114 aa11.74□□□□□ -0.53
GAPDH-201ENST00000229239 IGHV3OR16-9A0A0B4J2B5 98 aa11.74□□□□□ -0.53
GAPDH-201ENST00000229239 ATXN8Q156A1 80 aa11.74□□□□□ -0.53
GAPDH-201ENST00000229239 ETDBQ3ZM63 59 aa11.74□□□□□ -0.53
GAPDH-201ENST00000229239 COX7B2Q8TF08 81 aa11.74□□□□□ -0.53
GAPDH-201ENST00000229239 ATP5G1P05496 136 aa11.73□□□□□ -0.53
GAPDH-201ENST00000229239 DAD1P61803 113 aa11.73□□□□□ -0.53
GAPDH-201ENST00000229239 MEIG1Q5JSS6 88 aa11.73□□□□□ -0.53
GAPDH-201ENST00000229239 Q8NAQ8 132 aa11.73□□□□□ -0.53
GAPDH-201ENST00000229239 SPART-AS1P0CW21 52 aa11.72□□□□□ -0.53
GAPDH-201ENST00000229239 SS18Q15532 418 aa11.72□□□□□ -0.53
GAPDH-201ENST00000229239 LINC00959A0A1B0GUT2 108 aa11.71□□□□□ -0.53
GAPDH-201ENST00000229239 IGHV4-30-4P0DP06 118 aa11.71□□□□□ -0.53
GAPDH-201ENST00000229239 ICOSQ9Y6W8 199 aa11.71□□□□□ -0.53
GAPDH-201ENST00000229239 H7C2G1 150 aa11.7□□□□□ -0.54
GAPDH-201ENST00000229239 PRB2P02812 416 aaPredicted RBP11.7□□□□□ -0.54
GAPDH-201ENST00000229239 LINC01600Q96MT4 127 aa11.7□□□□□ -0.54
GAPDH-201ENST00000229239 TMEM262E9PQX1 116 aa11.7□□□□□ -0.54
GAPDH-201ENST00000229239 SMCPP49901 116 aaPredicted RBP11.69□□□□□ -0.54
GAPDH-201ENST00000229239 TEN1Q86WV5 123 aa11.69□□□□□ -0.54
GAPDH-201ENST00000229239 TRIAP1O43715 76 aa11.68□□□□□ -0.54
GAPDH-201ENST00000229239 NPC2P61916 151 aa11.68□□□□□ -0.54
GAPDH-201ENST00000229239 MRPL23Q16540 153 aaKnown RBP11.68□□□□□ -0.54
GAPDH-201ENST00000229239 IGKV3OR2-268A0A0C4DH90 116 aa11.67□□□□□ -0.54
GAPDH-201ENST00000229239 IBA57-AS1B1ANH7 110 aa11.67□□□□□ -0.54
GAPDH-201ENST00000229239 RPL13AP40429 203 aaKnown RBP11.67□□□□□ -0.54
GAPDH-201ENST00000229239 DAND5Q8N907 189 aa11.67□□□□□ -0.54
GAPDH-201ENST00000229239 PPDPFLQ8WWR9 84 aa11.67□□□□□ -0.54
GAPDH-201ENST00000229239 SLC25A20O43772 301 aa11.66□□□□□ -0.54
GAPDH-201ENST00000229239 FOXI1Q12951 378 aa11.66□□□□□ -0.54
GAPDH-201ENST00000229239 MTURNQ8N3F0 131 aa11.66□□□□□ -0.54
GAPDH-201ENST00000229239 DEFB4AO15263 64 aa11.66□□□□□ -0.54
GAPDH-201ENST00000229239 LINC01620Q4KN68 170 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 238.7 ms