RNA–Protein interactions for RNA: ENST00000221222.15

HOMER3-201, Transcript of homer scaffold protein 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene HOMER3, Length 1,384 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-201ENST00000221222 C14orf177Q52M58 125 aa15.51■□□□□ 0.07
HOMER3-201ENST00000221222 ATP5LO75964 103 aa15.49■□□□□ 0.07
HOMER3-201ENST00000221222 LINC00242Q5T6M2 205 aa15.49■□□□□ 0.07
HOMER3-201ENST00000221222 FAM19A3Q7Z5A8 133 aa15.49■□□□□ 0.07
HOMER3-201ENST00000221222 NTN5Q8WTR8 489 aaPredicted RBP15.49■□□□□ 0.07
HOMER3-201ENST00000221222 PGPEP1Q9NXJ5 209 aa15.49■□□□□ 0.07
HOMER3-201ENST00000221222 RYR1P21817 5038 aa15.49■□□□□ 0.07
HOMER3-201ENST00000221222 IGHV3OR16-9A0A0B4J2B5 98 aa15.49■□□□□ 0.07
HOMER3-201ENST00000221222 NUPR1O60356 82 aa15.49■□□□□ 0.07
HOMER3-201ENST00000221222 CDPF1Q6NVV7 123 aa15.49■□□□□ 0.07
HOMER3-201ENST00000221222 FAM19A2Q8N3H0 131 aa15.49■□□□□ 0.07
HOMER3-201ENST00000221222 CFAP161Q6P656 301 aa15.48■□□□□ 0.07
HOMER3-201ENST00000221222 C15orf56Q8N910 161 aa15.48■□□□□ 0.07
HOMER3-201ENST00000221222 COX7A2LO14548 114 aa15.47■□□□□ 0.07
HOMER3-201ENST00000221222 PMVKQ15126 192 aa15.47■□□□□ 0.07
HOMER3-201ENST00000221222 CST9LQ9H4G1 147 aa15.47■□□□□ 0.07
HOMER3-201ENST00000221222 PRSS1P07477 247 aa15.45■□□□□ 0.06
HOMER3-201ENST00000221222 SEC11AP67812 179 aa15.45■□□□□ 0.06
HOMER3-201ENST00000221222 IGHV1-58A0A0C4DH39 117 aa15.44■□□□□ 0.06
HOMER3-201ENST00000221222 COX6A2Q02221 97 aa15.44■□□□□ 0.06
HOMER3-201ENST00000221222 IGLV2-33A0A075B6J2 118 aaPredicted RBP15.43■□□□□ 0.06
HOMER3-201ENST00000221222 COA6Q5JTJ3 125 aaKnown RBP15.43■□□□□ 0.06
HOMER3-201ENST00000221222 C5orf38Q86SI9 138 aa15.43■□□□□ 0.06
HOMER3-201ENST00000221222 GVQW2A0A096LPI5 108 aaPredicted RBP15.42■□□□□ 0.06
HOMER3-201ENST00000221222 FUSP35637 526 aaKnown RBP eCLIP15.42■□□□□ 0.06
HOMER3-201ENST00000221222 IFI27L1Q96BM0 104 aa15.42■□□□□ 0.06
HOMER3-201ENST00000221222 ABCA13Q86UQ4 5058 aa15.42■□□□□ 0.06
HOMER3-201ENST00000221222 IGLV5-52A0A0A0MRZ9 124 aa15.41■□□□□ 0.06
HOMER3-201ENST00000221222 hDV102S1A0JD36 115 aa15.41■□□□□ 0.06
HOMER3-201ENST00000221222 C16orf90A8MZG2 172 aa15.41■□□□□ 0.06
HOMER3-201ENST00000221222 MALP21145 153 aa15.41■□□□□ 0.06
HOMER3-201ENST00000221222 HERVK_113P63121 156 aa15.41■□□□□ 0.06
HOMER3-201ENST00000221222 DNAH5Q8TE73 4624 aa15.41■□□□□ 0.06
HOMER3-201ENST00000221222 A0A087WZ39 114 aa15.4■□□□□ 0.06
HOMER3-201ENST00000221222 A0A0J9YXV3 536 aa15.4■□□□□ 0.06
HOMER3-201ENST00000221222 TINCRA0A1B0GVN0 87 aa15.4■□□□□ 0.06
HOMER3-201ENST00000221222 LEPROTL1O95214 131 aa15.4■□□□□ 0.06
HOMER3-201ENST00000221222 LINC01561Q8N1V8 128 aa15.39■□□□□ 0.05
HOMER3-201ENST00000221222 APOMO95445 188 aa15.38■□□□□ 0.05
HOMER3-201ENST00000221222 NDUFA6P56556 154 aa15.38■□□□□ 0.05
HOMER3-201ENST00000221222 HIGD2BQ4VC39 106 aa15.38■□□□□ 0.05
HOMER3-201ENST00000221222 KRTAP4-5Q9BYR2 181 aa15.38■□□□□ 0.05
HOMER3-201ENST00000221222 GEMIN7Q9H840 131 aaKnown RBP15.38■□□□□ 0.05
HOMER3-201ENST00000221222 CNBPP62633 177 aaKnown RBP15.37■□□□□ 0.05
HOMER3-201ENST00000221222 TRAV12-1A0A0B4J245 112 aa15.36■□□□□ 0.05
HOMER3-201ENST00000221222 HSPB8Q9UJY1 196 aa15.36■□□□□ 0.05
HOMER3-201ENST00000221222 IGHV3-64A0A075B6Q5 118 aa15.36■□□□□ 0.05
HOMER3-201ENST00000221222 IGLV5-45A0A087WSX0 123 aa15.36■□□□□ 0.05
HOMER3-201ENST00000221222 IGLC3P0DOY3 106 aa15.36■□□□□ 0.05
HOMER3-201ENST00000221222 OR10D4PQ8NGN7 298 aa15.36■□□□□ 0.05
HOMER3-201ENST00000221222 CDKN2A-AS1Q9UH64 79 aa15.36■□□□□ 0.05
HOMER3-201ENST00000221222 PACRGQ96M98 296 aaPredicted RBP15.35■□□□□ 0.05
HOMER3-201ENST00000221222 HSPG2P98160 4391 aa15.34■□□□□ 0.05
HOMER3-201ENST00000221222 IGLV4-69A0A075B6H9 119 aa15.34■□□□□ 0.05
HOMER3-201ENST00000221222 SLPIP03973 132 aa15.34■□□□□ 0.05
HOMER3-201ENST00000221222 FABP4P15090 132 aa15.34■□□□□ 0.05
HOMER3-201ENST00000221222 GCSHP23434 173 aa15.34■□□□□ 0.05
HOMER3-201ENST00000221222 LRP1BQ9NZR2 4599 aa15.33■□□□□ 0.05
HOMER3-201ENST00000221222 ZNF561-AS1K7EIQ3 104 aa15.33■□□□□ 0.04
HOMER3-201ENST00000221222 ORAOV1Q8WV07 137 aa15.33■□□□□ 0.04
HOMER3-201ENST00000221222 LINC00469Q8N7U9 141 aa15.32■□□□□ 0.04
HOMER3-201ENST00000221222 CHAC1Q9BUX1 264 aa15.32■□□□□ 0.04
HOMER3-201ENST00000221222 CHTOPQ9Y3Y2 248 aaKnown RBP15.32■□□□□ 0.04
HOMER3-201ENST00000221222 SPAG11BQ08648 103 aa15.31■□□□□ 0.04
HOMER3-201ENST00000221222 C9orf163Q8N9P6 203 aa15.31■□□□□ 0.04
HOMER3-201ENST00000221222 LINC00526Q96FQ7 95 aa15.31■□□□□ 0.04
HOMER3-201ENST00000221222 TRAV16A0A0A6YYK6 109 aaPredicted RBP15.3■□□□□ 0.04
HOMER3-201ENST00000221222 C2orf48Q96LS8 159 aa15.3■□□□□ 0.04
HOMER3-201ENST00000221222 KRTAP10-1P60331 282 aa15.29■□□□□ 0.04
HOMER3-201ENST00000221222 F8VRH5 84 aa15.28■□□□□ 0.04
HOMER3-201ENST00000221222 C11orf86A6NJI1 115 aa15.27■□□□□ 0.04
HOMER3-201ENST00000221222 ZNF22P17026 224 aaPredicted RBP15.27■□□□□ 0.04
HOMER3-201ENST00000221222 KIAA0087Q14695 138 aa15.27■□□□□ 0.04
HOMER3-201ENST00000221222 ODF1Q14990 250 aa15.27■□□□□ 0.04
HOMER3-201ENST00000221222 MRPL35Q9NZE8 188 aaKnown RBP15.27■□□□□ 0.04
HOMER3-201ENST00000221222 SMIM1B2RUZ4 78 aa15.26■□□□□ 0.03
HOMER3-201ENST00000221222 LINC01620Q4KN68 170 aa15.26■□□□□ 0.03
HOMER3-201ENST00000221222 MAP1LC3CQ9BXW4 147 aa15.26■□□□□ 0.03
HOMER3-201ENST00000221222 F8WDY8 70 aa15.25■□□□□ 0.03
HOMER3-201ENST00000221222 H3BRM9 83 aa15.25■□□□□ 0.03
HOMER3-201ENST00000221222 CDK2AP2O75956 126 aa15.25■□□□□ 0.03
HOMER3-201ENST00000221222 SYCNQ0VAF6 134 aa15.25■□□□□ 0.03
HOMER3-201ENST00000221222 H0Y8G0 127 aa15.24■□□□□ 0.03
HOMER3-201ENST00000221222 CARD19Q96LW7 228 aa15.24■□□□□ 0.03
HOMER3-201ENST00000221222 CAMK2N2Q96S95 79 aa15.24■□□□□ 0.03
HOMER3-201ENST00000221222 Q8IZM0 81 aa15.24■□□□□ 0.03
HOMER3-201ENST00000221222 SPINK8P0C7L1 97 aa15.22■□□□□ 0.03
HOMER3-201ENST00000221222 Q6ZRU5 148 aa15.22■□□□□ 0.03
HOMER3-201ENST00000221222 APOBP04114 4563 aaKnown RBP15.22■□□□□ 0.03
HOMER3-201ENST00000221222 SYS1-DBNDD2H3BUS1 97 aa15.21■□□□□ 0.02
HOMER3-201ENST00000221222 S100A6P06703 90 aa15.21■□□□□ 0.02
HOMER3-201ENST00000221222 PRSS2P07478 247 aa15.21■□□□□ 0.02
HOMER3-201ENST00000221222 TMEM170BQ5T4T1 132 aa15.21■□□□□ 0.02
HOMER3-201ENST00000221222 SDIM1Q6ZPB5 146 aa15.21■□□□□ 0.02
HOMER3-201ENST00000221222 IGLV5-39A0A0G2JS06 123 aa15.2■□□□□ 0.02
HOMER3-201ENST00000221222 NDUFA1O15239 70 aa15.2■□□□□ 0.02
HOMER3-201ENST00000221222 HIST3H2BBQ8N257 126 aa15.2■□□□□ 0.02
HOMER3-201ENST00000221222 TOMM7Q9P0U1 55 aa15.2■□□□□ 0.02
HOMER3-201ENST00000221222 Q6ZSA8 131 aa15.19■□□□□ 0.02
HOMER3-201ENST00000221222 PLNP26678 52 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms