RNA–Protein interactions for RNA: ENST00000220478.7

SCG3-201, Transcript of secretogranin III, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCG3, Length 3,315 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-201ENST00000220478 ZNF292O60281 2723 aa5.61□□□□□ -1.51
SCG3-201ENST00000220478 INAFM2P0DMQ5 153 aa5.61□□□□□ -1.51
SCG3-201ENST00000220478 IGKV3-20P01619 116 aa5.6□□□□□ -1.51
SCG3-201ENST00000220478 DEFB124Q8NES8 71 aa5.6□□□□□ -1.51
SCG3-201ENST00000220478 IGLV1-40P01703 118 aa5.6□□□□□ -1.51
SCG3-201ENST00000220478 IGHV3-38A0A0C4DH36 116 aa5.59□□□□□ -1.51
SCG3-201ENST00000220478 C10orf105Q8TEF2 133 aa5.59□□□□□ -1.51
SCG3-201ENST00000220478 LYPD5Q6UWN5 251 aa5.59□□□□□ -1.51
SCG3-201ENST00000220478 SORL1Q92673 2214 aa5.59□□□□□ -1.51
SCG3-201ENST00000220478 KNCNA6PVL3 124 aa5.59□□□□□ -1.52
SCG3-201ENST00000220478 SMIM11BQ8TCY0 68 aa5.59□□□□□ -1.52
SCG3-201ENST00000220478 MOB4Q9Y3A3 225 aa5.59□□□□□ -1.52
SCG3-201ENST00000220478 NCR3O14931 201 aa5.58□□□□□ -1.52
SCG3-201ENST00000220478 WFDC9Q8NEX5 89 aa5.58□□□□□ -1.52
SCG3-201ENST00000220478 OTOGLQ3ZCN5 2332 aa5.58□□□□□ -1.52
SCG3-201ENST00000220478 RBMY1BA6NDE4 496 aaKnown RBP5.58□□□□□ -1.52
SCG3-201ENST00000220478 RBMY1EA6NEQ0 496 aaKnown RBP5.58□□□□□ -1.52
SCG3-201ENST00000220478 C8orf87E5RJ46 101 aa5.58□□□□□ -1.52
SCG3-201ENST00000220478 K7EQG2 157 aa5.58□□□□□ -1.52
SCG3-201ENST00000220478 LCE2BO14633 110 aa5.58□□□□□ -1.52
SCG3-201ENST00000220478 NDUFC2O95298 119 aa5.58□□□□□ -1.52
SCG3-201ENST00000220478 RBMY1DP0C7P1 496 aaKnown RBP5.58□□□□□ -1.52
SCG3-201ENST00000220478 IGHV4-31P0DP07 118 aa5.58□□□□□ -1.52
SCG3-201ENST00000220478 LMO4P61968 165 aa5.58□□□□□ -1.52
SCG3-201ENST00000220478 LINC00482Q8N8I6 264 aa5.58□□□□□ -1.52
SCG3-201ENST00000220478 SEC61BP60468 96 aaKnown RBP5.57□□□□□ -1.52
SCG3-201ENST00000220478 C11orf72Q8NBR9 251 aa5.57□□□□□ -1.52
SCG3-201ENST00000220478 FBXL19-AS1Q494R0 122 aa5.57□□□□□ -1.52
SCG3-201ENST00000220478 USMG5Q96IX5 58 aa5.57□□□□□ -1.52
SCG3-201ENST00000220478 A0A0U1RQV1 116 aa5.56□□□□□ -1.52
SCG3-201ENST00000220478 H7BZZ5 65 aa5.56□□□□□ -1.52
SCG3-201ENST00000220478 BLCAPP62952 87 aa5.56□□□□□ -1.52
SCG3-201ENST00000220478 NTM-AS1Q6ZSK4 140 aa5.56□□□□□ -1.52
SCG3-201ENST00000220478 FP248Q71RG6 208 aaPredicted RBP5.56□□□□□ -1.52
SCG3-201ENST00000220478 COL6A6A6NMZ7 2263 aa5.56□□□□□ -1.52
SCG3-201ENST00000220478 GVINP1Q7Z2Y8 2422 aa5.56□□□□□ -1.52
SCG3-201ENST00000220478 A8MTW9 85 aa5.56□□□□□ -1.52
SCG3-201ENST00000220478 CIRBPQ14011 172 aaKnown RBP5.56□□□□□ -1.52
SCG3-201ENST00000220478 ACACAQ13085 2346 aa5.56□□□□□ -1.52
SCG3-201ENST00000220478 H3BUA1 57 aa5.56□□□□□ -1.52
SCG3-201ENST00000220478 SYNJ2BPP57105 145 aa5.56□□□□□ -1.52
SCG3-201ENST00000220478 A0A096LNT2 108 aa5.55□□□□□ -1.52
SCG3-201ENST00000220478 PLAC8L1A1L4L8 177 aa5.55□□□□□ -1.52
SCG3-201ENST00000220478 DNAL4O96015 105 aa5.55□□□□□ -1.52
SCG3-201ENST00000220478 SLPIP03973 132 aa5.55□□□□□ -1.52
SCG3-201ENST00000220478 C10orf99Q6UWK7 81 aa5.55□□□□□ -1.52
SCG3-201ENST00000220478 LINC00167Q96N53 147 aa5.55□□□□□ -1.52
SCG3-201ENST00000220478 PTPRZ1P23471 2315 aaPredicted RBP5.55□□□□□ -1.52
SCG3-201ENST00000220478 NDUFC2-KCTD14E9PQ53 114 aa5.55□□□□□ -1.52
SCG3-201ENST00000220478 IGHV3-53P01767 116 aa5.55□□□□□ -1.52
SCG3-201ENST00000220478 PSMB8P28062 276 aa5.54□□□□□ -1.52
SCG3-201ENST00000220478 MIR7-3HGQ8N6C7 128 aa5.54□□□□□ -1.52
SCG3-201ENST00000220478 CCKP06307 115 aa5.54□□□□□ -1.52
SCG3-201ENST00000220478 BRD3OSQ6XYD6 125 aa5.54□□□□□ -1.52
SCG3-201ENST00000220478 PFN2P35080 140 aa5.54□□□□□ -1.52
SCG3-201ENST00000220478 MAP6D1Q9H9H5 199 aa5.54□□□□□ -1.52
SCG3-201ENST00000220478 ZNF469Q96JG9 3925 aaPredicted RBP5.54□□□□□ -1.52
SCG3-201ENST00000220478 EP300Q09472 2414 aaPredicted RBP5.53□□□□□ -1.52
SCG3-201ENST00000220478 LY6G6DO95868 133 aa5.53□□□□□ -1.52
SCG3-201ENST00000220478 TRAV13-2A0A0B4J235 113 aa5.53□□□□□ -1.52
SCG3-201ENST00000220478 XCL1P47992 114 aa5.53□□□□□ -1.52
SCG3-201ENST00000220478 CCL18P55774 89 aa5.53□□□□□ -1.52
SCG3-201ENST00000220478 NANOS2P60321 138 aaKnown RBP5.53□□□□□ -1.52
SCG3-201ENST00000220478 CDC42SE2Q9NRR3 84 aa5.53□□□□□ -1.52
SCG3-201ENST00000220478 XCL2Q9UBD3 114 aa5.53□□□□□ -1.52
SCG3-201ENST00000220478 MAP1AP78559 2803 aaPredicted RBP5.53□□□□□ -1.52
SCG3-201ENST00000220478 TLN1Q9Y490 2541 aaKnown RBP5.53□□□□□ -1.52
SCG3-201ENST00000220478 A6NDX4 124 aa5.53□□□□□ -1.52
SCG3-201ENST00000220478 LECT2O14960 151 aa5.53□□□□□ -1.52
SCG3-201ENST00000220478 TRAV23DV6A0A075B6W5 121 aa5.52□□□□□ -1.53
SCG3-201ENST00000220478 LOC100131303A0A0U1RQF7 123 aa5.52□□□□□ -1.53
SCG3-201ENST00000220478 RBM12B-AS1Q9P1G2 102 aa5.52□□□□□ -1.53
SCG3-201ENST00000220478 SPTAN1Q13813 2472 aaKnown RBP5.52□□□□□ -1.53
SCG3-201ENST00000220478 BPESC1Q9GZL8 116 aa5.52□□□□□ -1.53
SCG3-201ENST00000220478 SND1-IT1Q9HBX3 110 aa5.52□□□□□ -1.53
SCG3-201ENST00000220478 IGHV4-38-2P0DP08 117 aa5.51□□□□□ -1.53
SCG3-201ENST00000220478 PIEZO1Q92508 2521 aa5.51□□□□□ -1.53
SCG3-201ENST00000220478 PAX4O43316 350 aa5.51□□□□□ -1.53
SCG3-201ENST00000220478 HTN1P15515 57 aa5.51□□□□□ -1.53
SCG3-201ENST00000220478 LY6EQ16553 131 aa5.51□□□□□ -1.53
SCG3-201ENST00000220478 ENHOQ6UWT2 76 aa5.51□□□□□ -1.53
SCG3-201ENST00000220478 MXRA5Q9NR99 2828 aa5.51□□□□□ -1.53
SCG3-201ENST00000220478 M0R2N4 97 aa5.51□□□□□ -1.53
SCG3-201ENST00000220478 CRPP02741 224 aa5.51□□□□□ -1.53
SCG3-201ENST00000220478 C20orf197Q8N268 126 aa5.5□□□□□ -1.53
SCG3-201ENST00000220478 COPS9Q8WXC6 57 aa5.5□□□□□ -1.53
SCG3-201ENST00000220478 SNRPD3P62318 126 aaKnown RBP5.5□□□□□ -1.53
SCG3-201ENST00000220478 KLKP1Q107X0 134 aa5.49□□□□□ -1.53
SCG3-201ENST00000220478 TMEM243Q9BU79 118 aa5.49□□□□□ -1.53
SCG3-201ENST00000220478 SERP1Q9Y6X1 66 aa5.49□□□□□ -1.53
SCG3-201ENST00000220478 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.49□□□□□ -1.53
SCG3-201ENST00000220478 Q6ZTI0 123 aa5.49□□□□□ -1.53
SCG3-201ENST00000220478 H0YGX0 51 aa5.49□□□□□ -1.53
SCG3-201ENST00000220478 NIPBLQ6KC79 2804 aaeCLIP5.49□□□□□ -1.538e-6■■■■□ 20
SCG3-201ENST00000220478 ANK3Q12955 4377 aaKnown RBP5.48□□□□□ -1.53
SCG3-201ENST00000220478 CACNA1AO00555 2505 aa5.48□□□□□ -1.53
SCG3-201ENST00000220478 TRAV10A0A0B4J240 114 aa5.48□□□□□ -1.53
SCG3-201ENST00000220478 H3BUX3 64 aa5.48□□□□□ -1.53
SCG3-201ENST00000220478 RPL36AP83881 106 aaKnown RBP5.48□□□□□ -1.53
SCG3-201ENST00000220478 RPL36ALQ969Q0 106 aaKnown RBP5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms