RNA–Protein interactions for RNA: ENST00000216085.11

RHBDD3-201, Transcript of rhomboid domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHBDD3, Length 1,794 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-201ENST00000216085 LEPROTL1O95214 131 aa13.38□□□□□ -0.27
RHBDD3-201ENST00000216085 LINC00173Q6ZV60 143 aa13.38□□□□□ -0.27
RHBDD3-201ENST00000216085 UBE2D1P51668 147 aa13.37□□□□□ -0.27
RHBDD3-201ENST00000216085 CFAP161Q6P656 301 aa13.37□□□□□ -0.27
RHBDD3-201ENST00000216085 HSPB8Q9UJY1 196 aa13.37□□□□□ -0.27
RHBDD3-201ENST00000216085 DNAH17Q9UFH2 4485 aa13.37□□□□□ -0.27
RHBDD3-201ENST00000216085 MAPKAPK5-AS1Q8N8E1 139 aa13.37□□□□□ -0.27
RHBDD3-201ENST00000216085 LRCOL1A6NCL2 159 aa13.36□□□□□ -0.27
RHBDD3-201ENST00000216085 FOXI1Q12951 378 aa13.36□□□□□ -0.27
RHBDD3-201ENST00000216085 ZC2HC1BQ5TFG8 222 aa13.36□□□□□ -0.27
RHBDD3-201ENST00000216085 IFI27L1Q96BM0 104 aa13.36□□□□□ -0.27
RHBDD3-201ENST00000216085 COX7A2LO14548 114 aa13.35□□□□□ -0.27
RHBDD3-201ENST00000216085 LECT2O14960 151 aa13.35□□□□□ -0.27
RHBDD3-201ENST00000216085 PRSS1P07477 247 aa13.35□□□□□ -0.27
RHBDD3-201ENST00000216085 MALP21145 153 aa13.35□□□□□ -0.27
RHBDD3-201ENST00000216085 PYY3Q5JQD4 70 aa13.35□□□□□ -0.27
RHBDD3-201ENST00000216085 CST9LQ9H4G1 147 aa13.35□□□□□ -0.27
RHBDD3-201ENST00000216085 GEMIN7Q9H840 131 aaKnown RBP13.35□□□□□ -0.27
RHBDD3-201ENST00000216085 USP17L23D6RBM5 183 aa13.34□□□□□ -0.27
RHBDD3-201ENST00000216085 HERVK_113P63121 156 aa13.34□□□□□ -0.27
RHBDD3-201ENST00000216085 LINC00242Q5T6M2 205 aa13.34□□□□□ -0.27
RHBDD3-201ENST00000216085 JOSD1Q15040 202 aaPredicted RBP13.33□□□□□ -0.28
RHBDD3-201ENST00000216085 LINC00469Q8N7U9 141 aa13.33□□□□□ -0.28
RHBDD3-201ENST00000216085 Q8N814 137 aa13.33□□□□□ -0.28
RHBDD3-201ENST00000216085 FAT2Q9NYQ8 4349 aa13.33□□□□□ -0.28
RHBDD3-201ENST00000216085 APOMO95445 188 aa13.32□□□□□ -0.28
RHBDD3-201ENST00000216085 FAM19A3Q7Z5A8 133 aa13.32□□□□□ -0.28
RHBDD3-201ENST00000216085 IGHV1-58A0A0C4DH39 117 aa13.31□□□□□ -0.28
RHBDD3-201ENST00000216085 IGHV3OR16-9A0A0B4J2B5 98 aa13.3□□□□□ -0.28
RHBDD3-201ENST00000216085 TINCRA0A1B0GVN0 87 aa13.3□□□□□ -0.28
RHBDD3-201ENST00000216085 WFDC2Q14508 124 aa13.3□□□□□ -0.28
RHBDD3-201ENST00000216085 C5orf38Q86SI9 138 aa13.3□□□□□ -0.28
RHBDD3-201ENST00000216085 NTN5Q8WTR8 489 aaPredicted RBP13.3□□□□□ -0.28
RHBDD3-201ENST00000216085 TRAV12-1A0A0B4J245 112 aa13.29□□□□□ -0.28
RHBDD3-201ENST00000216085 A0A0J9YXV3 536 aa13.29□□□□□ -0.28
RHBDD3-201ENST00000216085 MAP1LC3CQ9BXW4 147 aa13.29□□□□□ -0.28
RHBDD3-201ENST00000216085 hDV102S1A0JD36 115 aa13.28□□□□□ -0.28
RHBDD3-201ENST00000216085 A0A087WZ39 114 aa13.27□□□□□ -0.28
RHBDD3-201ENST00000216085 A0A1B0GVY2 172 aa13.27□□□□□ -0.28
RHBDD3-201ENST00000216085 CDPF1Q6NVV7 123 aa13.27□□□□□ -0.28
RHBDD3-201ENST00000216085 SPATA12Q7Z6I5 190 aa13.27□□□□□ -0.28
RHBDD3-201ENST00000216085 PGPEP1Q9NXJ5 209 aa13.27□□□□□ -0.28
RHBDD3-201ENST00000216085 CHTOPQ9Y3Y2 248 aaKnown RBP13.27□□□□□ -0.28
RHBDD3-201ENST00000216085 H0Y8G0 127 aa13.27□□□□□ -0.29
RHBDD3-201ENST00000216085 COX6A2Q02221 97 aa13.27□□□□□ -0.29
RHBDD3-201ENST00000216085 LINC01561Q8N1V8 128 aa13.27□□□□□ -0.29
RHBDD3-201ENST00000216085 C15orf56Q8N910 161 aa13.27□□□□□ -0.29
RHBDD3-201ENST00000216085 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.26□□□□□ -0.29
RHBDD3-201ENST00000216085 CHAC1Q9BUX1 264 aa13.26□□□□□ -0.29
RHBDD3-201ENST00000216085 GVQW2A0A096LPI5 108 aaPredicted RBP13.25□□□□□ -0.29
RHBDD3-201ENST00000216085 ZNF561-AS1K7EIQ3 104 aa13.25□□□□□ -0.29
RHBDD3-201ENST00000216085 IGLC3P0DOY3 106 aa13.25□□□□□ -0.29
RHBDD3-201ENST00000216085 IGLV5-52A0A0A0MRZ9 124 aa13.25□□□□□ -0.29
RHBDD3-201ENST00000216085 H3BRM9 83 aa13.25□□□□□ -0.29
RHBDD3-201ENST00000216085 HECTD4Q9Y4D8 3996 aa13.24□□□□□ -0.29
RHBDD3-201ENST00000216085 F8VRH5 84 aa13.24□□□□□ -0.29
RHBDD3-201ENST00000216085 SCGB1D1O95968 90 aa13.24□□□□□ -0.29
RHBDD3-201ENST00000216085 HIGD2BQ4VC39 106 aa13.24□□□□□ -0.29
RHBDD3-201ENST00000216085 CDKN2A-AS1Q9UH64 79 aa13.24□□□□□ -0.29
RHBDD3-201ENST00000216085 ORAOV1Q8WV07 137 aa13.23□□□□□ -0.29
RHBDD3-201ENST00000216085 IGHV3-64A0A075B6Q5 118 aa13.22□□□□□ -0.29
RHBDD3-201ENST00000216085 IGLV5-45A0A087WSX0 123 aa13.22□□□□□ -0.29
RHBDD3-201ENST00000216085 IGLV4-69A0A075B6H9 119 aa13.22□□□□□ -0.29
RHBDD3-201ENST00000216085 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.22□□□□□ -0.29
RHBDD3-201ENST00000216085 LINC00587B1AMM8 73 aa13.22□□□□□ -0.29
RHBDD3-201ENST00000216085 KRTDAPP60985 99 aa13.22□□□□□ -0.29
RHBDD3-201ENST00000216085 PKD1P98161 4303 aa13.21□□□□□ -0.29
RHBDD3-201ENST00000216085 KRTAP10-2P60368 255 aa13.21□□□□□ -0.29
RHBDD3-201ENST00000216085 SPAG11BQ08648 103 aa13.21□□□□□ -0.29
RHBDD3-201ENST00000216085 MRPL35Q9NZE8 188 aaKnown RBP13.21□□□□□ -0.29
RHBDD3-201ENST00000216085 ODF1Q14990 250 aa13.2□□□□□ -0.3
RHBDD3-201ENST00000216085 PLNP26678 52 aa13.2□□□□□ -0.3
RHBDD3-201ENST00000216085 PRSS2P07478 247 aa13.19□□□□□ -0.3
RHBDD3-201ENST00000216085 C3orf79P0CE67 100 aa13.19□□□□□ -0.3
RHBDD3-201ENST00000216085 CNBPP62633 177 aaKnown RBP13.19□□□□□ -0.3
RHBDD3-201ENST00000216085 TMEM170BQ5T4T1 132 aa13.19□□□□□ -0.3
RHBDD3-201ENST00000216085 C11orf86A6NJI1 115 aa13.18□□□□□ -0.3
RHBDD3-201ENST00000216085 C16orf90A8MZG2 172 aa13.18□□□□□ -0.3
RHBDD3-201ENST00000216085 SYS1-DBNDD2H3BUS1 97 aa13.18□□□□□ -0.3
RHBDD3-201ENST00000216085 DNAH11Q96DT5 4516 aa13.18□□□□□ -0.3
RHBDD3-201ENST00000216085 ZNF22P17026 224 aaPredicted RBP13.17□□□□□ -0.3
RHBDD3-201ENST00000216085 F8WDY8 70 aa13.17□□□□□ -0.3
RHBDD3-201ENST00000216085 PET117Q6UWS5 81 aa13.17□□□□□ -0.3
RHBDD3-201ENST00000216085 C2orf48Q96LS8 159 aa13.17□□□□□ -0.3
RHBDD3-201ENST00000216085 DPM2O94777 84 aa13.16□□□□□ -0.3
RHBDD3-201ENST00000216085 CAMK2N2Q96S95 79 aa13.16□□□□□ -0.3
RHBDD3-201ENST00000216085 TOMM7Q9P0U1 55 aa13.16□□□□□ -0.3
RHBDD3-201ENST00000216085 C20orf202A1L168 122 aa13.15□□□□□ -0.3
RHBDD3-201ENST00000216085 SMIM1B2RUZ4 78 aa13.15□□□□□ -0.3
RHBDD3-201ENST00000216085 SPINK8P0C7L1 97 aa13.15□□□□□ -0.31
RHBDD3-201ENST00000216085 GCSHP23434 173 aa13.15□□□□□ -0.31
RHBDD3-201ENST00000216085 Q8IZM0 81 aa13.15□□□□□ -0.31
RHBDD3-201ENST00000216085 CARD19Q96LW7 228 aa13.15□□□□□ -0.31
RHBDD3-201ENST00000216085 FUSP35637 526 aaKnown RBP eCLIP13.14□□□□□ -0.31
RHBDD3-201ENST00000216085 SYCNQ0VAF6 134 aa13.14□□□□□ -0.31
RHBDD3-201ENST00000216085 C6orf226Q5I0X4 101 aa13.14□□□□□ -0.31
RHBDD3-201ENST00000216085 LINC00526Q96FQ7 95 aa13.14□□□□□ -0.31
RHBDD3-201ENST00000216085 PKIGQ9Y2B9 76 aa13.14□□□□□ -0.31
RHBDD3-201ENST00000216085 NDUFA1O15239 70 aa13.13□□□□□ -0.31
RHBDD3-201ENST00000216085 IGKCP01834 107 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 109.2 ms