RNA–Protein interactions for RNA: ENST00000175756.9

PTPN18-201, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN18, Length 3,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-201ENST00000175756 HTN3P15516 51 aa12.38□□□□□ -0.43
PTPN18-201ENST00000175756 J3QLI3 93 aa12.37□□□□□ -0.43
PTPN18-201ENST00000175756 Q8N2B8 174 aa12.37□□□□□ -0.43
PTPN18-201ENST00000175756 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.36□□□□□ -0.43
PTPN18-201ENST00000175756 Q6YL49 198 aa12.36□□□□□ -0.43
PTPN18-201ENST00000175756 PLA2G2AP14555 144 aa12.36□□□□□ -0.43
PTPN18-201ENST00000175756 LITAFQ99732 161 aa12.35□□□□□ -0.43
PTPN18-201ENST00000175756 ESM1Q9NQ30 184 aa12.35□□□□□ -0.43
PTPN18-201ENST00000175756 SLPIP03973 132 aa12.35□□□□□ -0.43
PTPN18-201ENST00000175756 BRI3O95415 125 aa12.35□□□□□ -0.43
PTPN18-201ENST00000175756 C14orf132Q9NPU4 83 aa12.35□□□□□ -0.43
PTPN18-201ENST00000175756 NBEAL2Q6ZNJ1 2754 aa12.35□□□□□ -0.43
PTPN18-201ENST00000175756 TRAV13-2A0A0B4J235 113 aa12.34□□□□□ -0.43
PTPN18-201ENST00000175756 TIRAPP58753 221 aa12.34□□□□□ -0.43
PTPN18-201ENST00000175756 COX7B2Q8TF08 81 aa12.34□□□□□ -0.43
PTPN18-201ENST00000175756 PRORYQ9H606 182 aa12.34□□□□□ -0.43
PTPN18-201ENST00000175756 FBN2P35556 2912 aa12.34□□□□□ -0.43
PTPN18-201ENST00000175756 BSNQ9UPA5 3926 aa12.34□□□□□ -0.43
PTPN18-201ENST00000175756 LECT2O14960 151 aa12.34□□□□□ -0.43
PTPN18-201ENST00000175756 INAFM2P0DMQ5 153 aa12.34□□□□□ -0.43
PTPN18-201ENST00000175756 CITED1Q99966 193 aa12.34□□□□□ -0.43
PTPN18-201ENST00000175756 SMIM1B2RUZ4 78 aa12.33□□□□□ -0.44
PTPN18-201ENST00000175756 IGLV10-54A0A075B6I4 117 aa12.32□□□□□ -0.44
PTPN18-201ENST00000175756 NF1P21359 2839 aa12.32□□□□□ -0.44
PTPN18-201ENST00000175756 ODF3L2Q3SX64 289 aa12.32□□□□□ -0.44
PTPN18-201ENST00000175756 TMEM86BQ8N661 226 aa12.32□□□□□ -0.44
PTPN18-201ENST00000175756 CITED2Q99967 270 aaPredicted RBP12.32□□□□□ -0.44
PTPN18-201ENST00000175756 HERV-K104P63124 156 aa12.32□□□□□ -0.44
PTPN18-201ENST00000175756 TEP1Q99973 2627 aaKnown RBP12.31□□□□□ -0.44
PTPN18-201ENST00000175756 CELSR2Q9HCU4 2923 aa12.31□□□□□ -0.44
PTPN18-201ENST00000175756 KRTAP10-9P60411 292 aa12.31□□□□□ -0.44
PTPN18-201ENST00000175756 IGHV4-31P0DP07 118 aa12.31□□□□□ -0.44
PTPN18-201ENST00000175756 C4orf3Q8WVX3 66 aa12.31□□□□□ -0.44
PTPN18-201ENST00000175756 PF4P02776 101 aa12.3□□□□□ -0.44
PTPN18-201ENST00000175756 MALP21145 153 aa12.3□□□□□ -0.44
PTPN18-201ENST00000175756 CFAP161Q6P656 301 aa12.3□□□□□ -0.44
PTPN18-201ENST00000175756 SDIM1Q6ZPB5 146 aa12.3□□□□□ -0.44
PTPN18-201ENST00000175756 SOSTDC1Q6X4U4 206 aa12.3□□□□□ -0.44
PTPN18-201ENST00000175756 C1orf158Q8N1D5 194 aa12.29□□□□□ -0.44
PTPN18-201ENST00000175756 GCN1Q92616 2671 aaKnown RBP12.29□□□□□ -0.44
PTPN18-201ENST00000175756 RNF152Q8N8N0 203 aa12.29□□□□□ -0.44
PTPN18-201ENST00000175756 NHLRC4P0CG21 123 aaPredicted RBP12.28□□□□□ -0.44
PTPN18-201ENST00000175756 CDC42SE2Q9NRR3 84 aa12.28□□□□□ -0.44
PTPN18-201ENST00000175756 DEFB4AO15263 64 aa12.28□□□□□ -0.44
PTPN18-201ENST00000175756 TIMM17BO60830 172 aa12.28□□□□□ -0.44
PTPN18-201ENST00000175756 C11orf72Q8NBR9 251 aa12.28□□□□□ -0.44
PTPN18-201ENST00000175756 ACYP1P07311 99 aa12.27□□□□□ -0.45
PTPN18-201ENST00000175756 NTM-AS1Q6ZSK4 140 aa12.26□□□□□ -0.45
PTPN18-201ENST00000175756 TRBV10-1A0A0K0K1A3 114 aa12.26□□□□□ -0.45
PTPN18-201ENST00000175756 LINC00643Q86TS7 51 aa12.26□□□□□ -0.45
PTPN18-201ENST00000175756 NCR3O14931 201 aa12.26□□□□□ -0.45
PTPN18-201ENST00000175756 SS18Q15532 418 aa12.25□□□□□ -0.45
PTPN18-201ENST00000175756 MRPL23Q16540 153 aaKnown RBP12.25□□□□□ -0.45
PTPN18-201ENST00000175756 S100A7L2Q5SY68 101 aa12.25□□□□□ -0.45
PTPN18-201ENST00000175756 GYPEP15421 78 aa12.25□□□□□ -0.45
PTPN18-201ENST00000175756 ATRQ13535 2644 aa12.24□□□□□ -0.45
PTPN18-201ENST00000175756 IGLV4-60A0A075B6I1 120 aa12.23□□□□□ -0.45
PTPN18-201ENST00000175756 DEFB113Q30KQ7 82 aa12.23□□□□□ -0.45
PTPN18-201ENST00000175756 SMIM11BQ8TCY0 68 aa12.23□□□□□ -0.45
PTPN18-201ENST00000175756 FAM218AQ96MZ4 157 aa12.23□□□□□ -0.45
PTPN18-201ENST00000175756 MXRA5Q9NR99 2828 aa12.23□□□□□ -0.45
PTPN18-201ENST00000175756 FAM104AQ969W3 186 aa12.23□□□□□ -0.45
PTPN18-201ENST00000175756 A0A1B0GX51 115 aa12.22□□□□□ -0.45
PTPN18-201ENST00000175756 TRACP01848 142 aa12.22□□□□□ -0.45
PTPN18-201ENST00000175756 ANGP03950 147 aaKnown RBP12.22□□□□□ -0.45
PTPN18-201ENST00000175756 LAMTOR3Q9UHA4 124 aa12.22□□□□□ -0.45
PTPN18-201ENST00000175756 DNAJC9-AS1A6NH13 148 aa12.21□□□□□ -0.45
PTPN18-201ENST00000175756 A0A087WYN8 130 aa12.21□□□□□ -0.46
PTPN18-201ENST00000175756 M0QXV9 152 aa12.21□□□□□ -0.46
PTPN18-201ENST00000175756 PRR3P79522 188 aaKnown RBP12.21□□□□□ -0.46
PTPN18-201ENST00000175756 BEAN1Q3B7T3 259 aa12.21□□□□□ -0.46
PTPN18-201ENST00000175756 C16orf74Q96GX8 76 aa12.21□□□□□ -0.46
PTPN18-201ENST00000175756 CCL18P55774 89 aa12.2□□□□□ -0.46
PTPN18-201ENST00000175756 Q6Q795 121 aa12.2□□□□□ -0.46
PTPN18-201ENST00000175756 LINC00337Q8N6G1 96 aa12.2□□□□□ -0.46
PTPN18-201ENST00000175756 BBC3Q96PG8 261 aaPredicted RBP12.2□□□□□ -0.46
PTPN18-201ENST00000175756 ITPR2Q14571 2701 aa12.2□□□□□ -0.46
PTPN18-201ENST00000175756 WFDC11Q8NEX6 87 aa12.19□□□□□ -0.46
PTPN18-201ENST00000175756 OVOL2Q9BRP0 275 aa12.19□□□□□ -0.46
PTPN18-201ENST00000175756 KLK5Q9Y337 293 aaPredicted RBP12.19□□□□□ -0.46
PTPN18-201ENST00000175756 IGLV5-39A0A0G2JS06 123 aa12.18□□□□□ -0.46
PTPN18-201ENST00000175756 FAM240AA0A1B0GVK7 77 aa12.17□□□□□ -0.46
PTPN18-201ENST00000175756 ORMDL1Q9P0S3 153 aa12.17□□□□□ -0.46
PTPN18-201ENST00000175756 TRBV6-8A0A0A6YYG3 113 aa12.17□□□□□ -0.46
PTPN18-201ENST00000175756 H0YGX0 51 aa12.17□□□□□ -0.46
PTPN18-201ENST00000175756 A0A087WVE0 104 aa12.17□□□□□ -0.46
PTPN18-201ENST00000175756 LINC00526Q96FQ7 95 aa12.16□□□□□ -0.46
PTPN18-201ENST00000175756 hADV29S1A0JD25 119 aa12.15□□□□□ -0.46
PTPN18-201ENST00000175756 HAMPP81172 84 aa12.14□□□□□ -0.47
PTPN18-201ENST00000175756 WFDC9Q8NEX5 89 aa12.14□□□□□ -0.47
PTPN18-201ENST00000175756 TRAV25A0A0B4J276 109 aa12.14□□□□□ -0.47
PTPN18-201ENST00000175756 SMCR5Q8TEV8 140 aa12.13□□□□□ -0.47
PTPN18-201ENST00000175756 IGLV5-45A0A087WSX0 123 aa12.13□□□□□ -0.47
PTPN18-201ENST00000175756 F5H768 121 aa12.13□□□□□ -0.47
PTPN18-201ENST00000175756 CMC4P56277 68 aaPredicted RBP12.13□□□□□ -0.47
PTPN18-201ENST00000175756 LINC00269Q8N2A0 174 aa12.13□□□□□ -0.47
PTPN18-201ENST00000175756 SHISA2Q6UWI4 295 aa12.12□□□□□ -0.47
PTPN18-201ENST00000175756 C3orf22Q8N5N4 141 aa12.12□□□□□ -0.47
PTPN18-201ENST00000175756 ZFHX3Q15911 3703 aa12.11□□□□□ -0.47
PTPN18-201ENST00000175756 C9orf116Q5BN46 136 aaPredicted RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms