RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 IFITM1P13164 125 aa5.82□□□□□ -1.48
VAMP3-201ENST00000054666 FAM222AQ5U5X8 452 aa5.82□□□□□ -1.48
VAMP3-201ENST00000054666 ATP6V0E2Q8NHE4 81 aa5.82□□□□□ -1.48
VAMP3-201ENST00000054666 OTOGQ6ZRI0 2925 aa5.81□□□□□ -1.48
VAMP3-201ENST00000054666 H7C2G1 150 aa5.81□□□□□ -1.48
VAMP3-201ENST00000054666 J3QR89 54 aa5.81□□□□□ -1.48
VAMP3-201ENST00000054666 IGHV3-33P01772 117 aa5.81□□□□□ -1.48
VAMP3-201ENST00000054666 PRIMA1Q86XR5 153 aa5.81□□□□□ -1.48
VAMP3-201ENST00000054666 IGKV3OR2-268A0A0C4DH90 116 aa5.8□□□□□ -1.48
VAMP3-201ENST00000054666 NPC2P61916 151 aa5.8□□□□□ -1.48
VAMP3-201ENST00000054666 HERV-K104P63124 156 aa5.8□□□□□ -1.48
VAMP3-201ENST00000054666 MEIG1Q5JSS6 88 aa5.8□□□□□ -1.48
VAMP3-201ENST00000054666 MTURNQ8N3F0 131 aa5.8□□□□□ -1.48
VAMP3-201ENST00000054666 TEX48A0A1B0GUV7 120 aa5.8□□□□□ -1.48
VAMP3-201ENST00000054666 PAX4O43316 350 aa5.8□□□□□ -1.48
VAMP3-201ENST00000054666 DAD1P61803 113 aa5.8□□□□□ -1.48
VAMP3-201ENST00000054666 WFDC2Q14508 124 aa5.8□□□□□ -1.48
VAMP3-201ENST00000054666 ADAMTSL4-AS1Q5T5F5 129 aa5.8□□□□□ -1.48
VAMP3-201ENST00000054666 IGHV4-28A0A0C4DH34 117 aa5.79□□□□□ -1.48
VAMP3-201ENST00000054666 F5H768 121 aa5.79□□□□□ -1.48
VAMP3-201ENST00000054666 G3V4G9 280 aa5.79□□□□□ -1.48
VAMP3-201ENST00000054666 TCL1BO95988 128 aa5.79□□□□□ -1.48
VAMP3-201ENST00000054666 MIFP14174 115 aa5.79□□□□□ -1.48
VAMP3-201ENST00000054666 RNF183Q96D59 192 aa5.79□□□□□ -1.48
VAMP3-201ENST00000054666 IGLV4-60A0A075B6I1 120 aa5.79□□□□□ -1.48
VAMP3-201ENST00000054666 TMEM262E9PQX1 116 aa5.79□□□□□ -1.48
VAMP3-201ENST00000054666 ETDBQ3ZM63 59 aa5.79□□□□□ -1.48
VAMP3-201ENST00000054666 LCE2DQ5TA82 110 aaPredicted RBP5.79□□□□□ -1.48
VAMP3-201ENST00000054666 WFDC9Q8NEX5 89 aa5.79□□□□□ -1.48
VAMP3-201ENST00000054666 ZNF625Q96I27 306 aaPredicted RBP5.79□□□□□ -1.48
VAMP3-201ENST00000054666 PRO0461Q9UI25 63 aa5.79□□□□□ -1.48
VAMP3-201ENST00000054666 EIF4EBP3O60516 100 aaPredicted RBP5.78□□□□□ -1.48
VAMP3-201ENST00000054666 DAND5Q8N907 189 aa5.78□□□□□ -1.48
VAMP3-201ENST00000054666 DEFB4AO15263 64 aa5.78□□□□□ -1.48
VAMP3-201ENST00000054666 WIPF1O43516 503 aa5.78□□□□□ -1.48
VAMP3-201ENST00000054666 COX6CP09669 75 aa5.78□□□□□ -1.48
VAMP3-201ENST00000054666 COX7B2Q8TF08 81 aa5.78□□□□□ -1.48
VAMP3-201ENST00000054666 NIPBLQ6KC79 2804 aaeCLIP5.78□□□□□ -1.48
VAMP3-201ENST00000054666 TRBV30A0A0K0K1B3 111 aa5.77□□□□□ -1.49
VAMP3-201ENST00000054666 ATP5G1P05496 136 aa5.77□□□□□ -1.49
VAMP3-201ENST00000054666 IGHV4-30-4P0DP06 118 aa5.77□□□□□ -1.49
VAMP3-201ENST00000054666 ATXN8Q156A1 80 aa5.77□□□□□ -1.49
VAMP3-201ENST00000054666 SH2D6Q7Z4S9 175 aa5.77□□□□□ -1.49
VAMP3-201ENST00000054666 LINC00308Q8TCZ7 52 aa5.77□□□□□ -1.49
VAMP3-201ENST00000054666 TOMM7Q9P0U1 55 aa5.77□□□□□ -1.49
VAMP3-201ENST00000054666 A0A096LPF7 62 aa5.76□□□□□ -1.49
VAMP3-201ENST00000054666 A0A0U1RRA0 63 aa5.76□□□□□ -1.49
VAMP3-201ENST00000054666 A0A1B0GUV1 79 aa5.76□□□□□ -1.49
VAMP3-201ENST00000054666 RPL13AP40429 203 aaKnown RBP5.76□□□□□ -1.49
VAMP3-201ENST00000054666 SS18Q15532 418 aa5.76□□□□□ -1.49
VAMP3-201ENST00000054666 Q8NAQ8 132 aa5.76□□□□□ -1.49
VAMP3-201ENST00000054666 ICOSQ9Y6W8 199 aa5.76□□□□□ -1.49
VAMP3-201ENST00000054666 SPART-AS1P0CW21 52 aa5.76□□□□□ -1.49
VAMP3-201ENST00000054666 HIVEP1P15822 2718 aa5.75□□□□□ -1.49
VAMP3-201ENST00000054666 A0A087WZ39 114 aa5.75□□□□□ -1.49
VAMP3-201ENST00000054666 IGHV3OR16-9A0A0B4J2B5 98 aa5.75□□□□□ -1.49
VAMP3-201ENST00000054666 LINC00959A0A1B0GUT2 108 aa5.75□□□□□ -1.49
VAMP3-201ENST00000054666 TRIAP1O43715 76 aa5.75□□□□□ -1.49
VAMP3-201ENST00000054666 CELA1Q9UNI1 258 aa5.75□□□□□ -1.49
VAMP3-201ENST00000054666 TRAV26-1A0A087WT03 109 aa5.74□□□□□ -1.49
VAMP3-201ENST00000054666 C9JAW5 83 aa5.74□□□□□ -1.49
VAMP3-201ENST00000054666 SLC25A20O43772 301 aa5.74□□□□□ -1.49
VAMP3-201ENST00000054666 SMCPP49901 116 aaPredicted RBP5.74□□□□□ -1.49
VAMP3-201ENST00000054666 C5orf38Q86SI9 138 aa5.74□□□□□ -1.49
VAMP3-201ENST00000054666 TEN1Q86WV5 123 aa5.74□□□□□ -1.49
VAMP3-201ENST00000054666 PPDPFQ9H3Y8 114 aa5.74□□□□□ -1.49
VAMP3-201ENST00000054666 HTN3P15516 51 aa5.74□□□□□ -1.49
VAMP3-201ENST00000054666 XCL1P47992 114 aa5.74□□□□□ -1.49
VAMP3-201ENST00000054666 MRPL23Q16540 153 aaKnown RBP5.74□□□□□ -1.49
VAMP3-201ENST00000054666 CLPSL2Q6UWE3 100 aa5.74□□□□□ -1.49
VAMP3-201ENST00000054666 F8P00451 2351 aa5.73□□□□□ -1.49
VAMP3-201ENST00000054666 PCP4P48539 62 aa5.73□□□□□ -1.49
VAMP3-201ENST00000054666 LINC01620Q4KN68 170 aa5.73□□□□□ -1.49
VAMP3-201ENST00000054666 ATRQ13535 2644 aa5.73□□□□□ -1.49
VAMP3-201ENST00000054666 M0QXV9 152 aa5.72□□□□□ -1.49
VAMP3-201ENST00000054666 FOXI1Q12951 378 aa5.72□□□□□ -1.49
VAMP3-201ENST00000054666 SOSTDC1Q6X4U4 206 aa5.72□□□□□ -1.49
VAMP3-201ENST00000054666 MIR7-3HGQ8N6C7 128 aa5.72□□□□□ -1.49
VAMP3-201ENST00000054666 PPDPFLQ8WWR9 84 aa5.72□□□□□ -1.49
VAMP3-201ENST00000054666 IBA57-AS1B1ANH7 110 aa5.72□□□□□ -1.49
VAMP3-201ENST00000054666 CRPP02741 224 aa5.72□□□□□ -1.49
VAMP3-201ENST00000054666 ANGP03950 147 aaKnown RBP5.72□□□□□ -1.49
VAMP3-201ENST00000054666 LINC00158P58513 81 aa5.72□□□□□ -1.49
VAMP3-201ENST00000054666 LINC01561Q8N1V8 128 aa5.72□□□□□ -1.49
VAMP3-201ENST00000054666 C3orf56Q8N813 242 aa5.72□□□□□ -1.49
VAMP3-201ENST00000054666 KRTAP24-1Q3LI83 254 aa5.71□□□□□ -1.49
VAMP3-201ENST00000054666 OXLD1Q5BKU9 147 aa5.71□□□□□ -1.49
VAMP3-201ENST00000054666 C6orf226Q5I0X4 101 aa5.71□□□□□ -1.49
VAMP3-201ENST00000054666 ANKRD29Q8N6D5 301 aa5.71□□□□□ -1.49
VAMP3-201ENST00000054666 TEP1Q99973 2627 aaKnown RBP5.71□□□□□ -1.5
VAMP3-201ENST00000054666 LELP1Q5T871 98 aa5.71□□□□□ -1.5
VAMP3-201ENST00000054666 Q8IZM0 81 aa5.71□□□□□ -1.5
VAMP3-201ENST00000054666 LINC00269Q8N2A0 174 aa5.71□□□□□ -1.5
VAMP3-201ENST00000054666 C11orf68Q9H3H3 251 aaKnown RBP5.71□□□□□ -1.5
VAMP3-201ENST00000054666 TRAV13-2A0A0B4J235 113 aa5.7□□□□□ -1.5
VAMP3-201ENST00000054666 TRBV10-2A0A0K0K1G8 114 aa5.7□□□□□ -1.5
VAMP3-201ENST00000054666 COX7A2LO14548 114 aa5.7□□□□□ -1.5
VAMP3-201ENST00000054666 REG3AQ06141 175 aa5.7□□□□□ -1.5
VAMP3-201ENST00000054666 SHISA2Q6UWI4 295 aa5.7□□□□□ -1.5
VAMP3-201ENST00000054666 VWFP04275 2813 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms