RNA–Protein interactions for RNA: ENST00000003912.7

NIPAL3-201, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-201ENST00000003912 UBE2D1P51668 147 aa7.45□□□□□ -1.22
NIPAL3-201ENST00000003912 MUC7Q8TAX7 377 aa7.45□□□□□ -1.22
NIPAL3-201ENST00000003912 ZNF706Q9Y5V0 76 aaPredicted RBP7.45□□□□□ -1.22
NIPAL3-201ENST00000003912 BEAN1Q3B7T3 259 aa7.45□□□□□ -1.22
NIPAL3-201ENST00000003912 C2CD3Q4AC94 2353 aa7.45□□□□□ -1.22
NIPAL3-201ENST00000003912 M0R378 163 aa7.45□□□□□ -1.22
NIPAL3-201ENST00000003912 LINC00526Q96FQ7 95 aa7.45□□□□□ -1.22
NIPAL3-201ENST00000003912 TIMM17BO60830 172 aa7.44□□□□□ -1.22
NIPAL3-201ENST00000003912 FHL3Q13643 280 aa7.44□□□□□ -1.22
NIPAL3-201ENST00000003912 COX8CQ7Z4L0 72 aa7.44□□□□□ -1.22
NIPAL3-201ENST00000003912 Q8IZM0 81 aa7.44□□□□□ -1.22
NIPAL3-201ENST00000003912 FN1P02751 2386 aaKnown RBP7.44□□□□□ -1.22
NIPAL3-201ENST00000003912 COX17Q14061 63 aa7.44□□□□□ -1.22
NIPAL3-201ENST00000003912 B5MCH6 92 aa7.44□□□□□ -1.22
NIPAL3-201ENST00000003912 TEN1Q86WV5 123 aa7.43□□□□□ -1.22
NIPAL3-201ENST00000003912 PTH2Q96A98 100 aa7.43□□□□□ -1.22
NIPAL3-201ENST00000003912 TRAV23DV6A0A075B6W5 121 aa7.43□□□□□ -1.22
NIPAL3-201ENST00000003912 H0Y9J4 135 aa7.43□□□□□ -1.22
NIPAL3-201ENST00000003912 DOPEY1Q5JWR5 2465 aa7.43□□□□□ -1.22
NIPAL3-201ENST00000003912 A0A096LNI7 61 aa7.42□□□□□ -1.22
NIPAL3-201ENST00000003912 DSCAML1Q8TD84 2053 aa7.42□□□□□ -1.22
NIPAL3-201ENST00000003912 IGKV2-28A0A075B6P5 120 aa7.42□□□□□ -1.22
NIPAL3-201ENST00000003912 IGKV2D-28P01615 120 aa7.42□□□□□ -1.22
NIPAL3-201ENST00000003912 EPG5Q9HCE0 2579 aa7.42□□□□□ -1.22
NIPAL3-201ENST00000003912 C1orf134Q5TEV5 83 aa7.41□□□□□ -1.22
NIPAL3-201ENST00000003912 A0A1B0GX51 115 aa7.41□□□□□ -1.22
NIPAL3-201ENST00000003912 CYSRT1A8MQ03 144 aa7.41□□□□□ -1.22
NIPAL3-201ENST00000003912 GAS8-AS1O95177 125 aa7.41□□□□□ -1.22
NIPAL3-201ENST00000003912 MP68P56378 58 aa7.41□□□□□ -1.22
NIPAL3-201ENST00000003912 DHRS4-AS1Q9P1J3 65 aa7.41□□□□□ -1.22
NIPAL3-201ENST00000003912 A8MZ25 164 aa7.41□□□□□ -1.22
NIPAL3-201ENST00000003912 C6orf99Q4VX62 202 aa7.41□□□□□ -1.22
NIPAL3-201ENST00000003912 IGLV5-52A0A0A0MRZ9 124 aa7.4□□□□□ -1.22
NIPAL3-201ENST00000003912 TRBV30A0A0K0K1B3 111 aa7.4□□□□□ -1.22
NIPAL3-201ENST00000003912 FSHBP01225 129 aa7.4□□□□□ -1.22
NIPAL3-201ENST00000003912 SMIM20Q8N5G0 67 aa7.4□□□□□ -1.22
NIPAL3-201ENST00000003912 EGFEM1PQ0D2K5 195 aa7.4□□□□□ -1.23
NIPAL3-201ENST00000003912 YPEL4Q96NS1 127 aa7.4□□□□□ -1.23
NIPAL3-201ENST00000003912 IGKV2D-26A0A0A0MRZ7 120 aa7.4□□□□□ -1.23
NIPAL3-201ENST00000003912 TAX1BP3O14907 124 aa7.4□□□□□ -1.23
NIPAL3-201ENST00000003912 LYPD5Q6UWN5 251 aa7.39□□□□□ -1.23
NIPAL3-201ENST00000003912 IGIPA6NJ69 53 aa7.39□□□□□ -1.23
NIPAL3-201ENST00000003912 LINC00242Q5T6M2 205 aa7.39□□□□□ -1.23
NIPAL3-201ENST00000003912 MAPKAPK5-AS1Q8N8E1 139 aa7.39□□□□□ -1.23
NIPAL3-201ENST00000003912 PLAC8L1A1L4L8 177 aa7.38□□□□□ -1.23
NIPAL3-201ENST00000003912 CSDC2Q9Y534 153 aaKnown RBP7.38□□□□□ -1.23
NIPAL3-201ENST00000003912 IGKV3D-7A0A0C4DH55 119 aa7.38□□□□□ -1.23
NIPAL3-201ENST00000003912 USP17L23D6RBM5 183 aa7.38□□□□□ -1.23
NIPAL3-201ENST00000003912 F8WDY8 70 aa7.37□□□□□ -1.23
NIPAL3-201ENST00000003912 C14orf132Q9NPU4 83 aa7.37□□□□□ -1.23
NIPAL3-201ENST00000003912 TCL1BO95988 128 aa7.37□□□□□ -1.23
NIPAL3-201ENST00000003912 IGLV4-60A0A075B6I1 120 aa7.37□□□□□ -1.23
NIPAL3-201ENST00000003912 A0A1B0GUV1 79 aa7.37□□□□□ -1.23
NIPAL3-201ENST00000003912 WFDC2Q14508 124 aa7.37□□□□□ -1.23
NIPAL3-201ENST00000003912 RPL37AP8A6NKH3 93 aa7.36□□□□□ -1.23
NIPAL3-201ENST00000003912 BPY2O14599 106 aa7.36□□□□□ -1.23
NIPAL3-201ENST00000003912 UNQ6190/PRO20217Q6UXQ8 127 aa7.36□□□□□ -1.23
NIPAL3-201ENST00000003912 TP73-AS1Q9UF72 201 aa7.36□□□□□ -1.23
NIPAL3-201ENST00000003912 WFDC10BQ8IUB3 73 aa7.36□□□□□ -1.23
NIPAL3-201ENST00000003912 SETD2Q9BYW2 2564 aaPredicted RBP7.35□□□□□ -1.23
NIPAL3-201ENST00000003912 M0QXV9 152 aa7.35□□□□□ -1.23
NIPAL3-201ENST00000003912 LINC00694P0DN24 101 aa7.35□□□□□ -1.23
NIPAL3-201ENST00000003912 PPDPFQ9H3Y8 114 aa7.35□□□□□ -1.23
NIPAL3-201ENST00000003912 RPL28P46779 137 aaKnown RBP7.35□□□□□ -1.23
NIPAL3-201ENST00000003912 PCSK5Q92824 1860 aa7.35□□□□□ -1.23
NIPAL3-201ENST00000003912 ZNF73O43830 326 aaPredicted RBP7.34□□□□□ -1.23
NIPAL3-201ENST00000003912 MTORP42345 2549 aa7.34□□□□□ -1.23
NIPAL3-201ENST00000003912 Q6ZSN1 163 aa7.34□□□□□ -1.23
NIPAL3-201ENST00000003912 SLPIP03973 132 aa7.34□□□□□ -1.23
NIPAL3-201ENST00000003912 FOXI1Q12951 378 aa7.34□□□□□ -1.23
NIPAL3-201ENST00000003912 CELA1Q9UNI1 258 aa7.34□□□□□ -1.23
NIPAL3-201ENST00000003912 TET2Q6N021 2002 aaPredicted RBP7.34□□□□□ -1.23
NIPAL3-201ENST00000003912 SMIM1B2RUZ4 78 aa7.34□□□□□ -1.24
NIPAL3-201ENST00000003912 CHKB-CPT1BH3BT56 60 aa7.34□□□□□ -1.24
NIPAL3-201ENST00000003912 C6orf223Q8N319 242 aa7.34□□□□□ -1.24
NIPAL3-201ENST00000003912 ANKRD17O75179 2603 aaKnown RBP7.33□□□□□ -1.24
NIPAL3-201ENST00000003912 TRIAP1O43715 76 aa7.33□□□□□ -1.24
NIPAL3-201ENST00000003912 C11orf72Q8NBR9 251 aa7.33□□□□□ -1.24
NIPAL3-201ENST00000003912 C2orf48Q96LS8 159 aa7.33□□□□□ -1.24
NIPAL3-201ENST00000003912 POLQO75417 2590 aa7.32□□□□□ -1.24
NIPAL3-201ENST00000003912 UPK3BQ9BT76 320 aa7.32□□□□□ -1.24
NIPAL3-201ENST00000003912 Q6ZQY7 126 aa7.32□□□□□ -1.24
NIPAL3-201ENST00000003912 POM121L12Q8N7R1 296 aa7.32□□□□□ -1.24
NIPAL3-201ENST00000003912 SBSPONQ8IVN8 264 aa7.32□□□□□ -1.24
NIPAL3-201ENST00000003912 MDFIQ99750 246 aa7.32□□□□□ -1.24
NIPAL3-201ENST00000003912 ATOX1O00244 68 aa7.31□□□□□ -1.24
NIPAL3-201ENST00000003912 AMELXQ99217 191 aa7.31□□□□□ -1.24
NIPAL3-201ENST00000003912 J3KT08 172 aa7.3□□□□□ -1.24
NIPAL3-201ENST00000003912 CCKP06307 115 aa7.3□□□□□ -1.24
NIPAL3-201ENST00000003912 LINC01561Q8N1V8 128 aa7.3□□□□□ -1.24
NIPAL3-201ENST00000003912 COX6A2Q02221 97 aa7.3□□□□□ -1.24
NIPAL3-201ENST00000003912 SMIM11BQ8TCY0 68 aa7.3□□□□□ -1.24
NIPAL3-201ENST00000003912 NDUFC2-KCTD14E9PQ53 114 aa7.3□□□□□ -1.24
NIPAL3-201ENST00000003912 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.3□□□□□ -1.24
NIPAL3-201ENST00000003912 WFDC9Q8NEX5 89 aa7.3□□□□□ -1.24
NIPAL3-201ENST00000003912 H3BNG1 76 aa7.29□□□□□ -1.24
NIPAL3-201ENST00000003912 REG3GQ6UW15 175 aa7.29□□□□□ -1.24
NIPAL3-201ENST00000003912 IGLV9-49A0A0B4J1Y8 123 aa7.29□□□□□ -1.24
NIPAL3-201ENST00000003912 C9orf116Q5BN46 136 aaPredicted RBP7.29□□□□□ -1.24
NIPAL3-201ENST00000003912 FAM19A4Q96LR4 140 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms