RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 Ssbp2Q9CYZ8 361 aa17.86■□□□□ 0.45
Scn1b-201ENSMUST00000098548 Fbxo24Q9D417 589 aa17.86■□□□□ 0.45
Scn1b-201ENSMUST00000098548 Arpc1bQ9WV32 372 aaKnown RBP17.86■□□□□ 0.45
Scn1b-201ENSMUST00000098548 Olfr1024A2ASU7 327 aa17.85■□□□□ 0.45
Scn1b-201ENSMUST00000098548 Esp23A8R0V5 104 aa17.85■□□□□ 0.45
Scn1b-201ENSMUST00000098548 Cd74P04441 279 aa17.85■□□□□ 0.45
Scn1b-201ENSMUST00000098548 Evi2aP20934 223 aa17.85■□□□□ 0.45
Scn1b-201ENSMUST00000098548 Sult1a1P52840 291 aa17.85■□□□□ 0.45
Scn1b-201ENSMUST00000098548 Olfr1386Q7TQT0 309 aa17.85■□□□□ 0.45
Scn1b-201ENSMUST00000098548 Olfr1026Q7TR90 307 aa17.85■□□□□ 0.45
Scn1b-201ENSMUST00000098548 Nkx2-8O70584 235 aa17.84■□□□□ 0.45
Scn1b-201ENSMUST00000098548 PlaurP35456 327 aa17.84■□□□□ 0.45
Scn1b-201ENSMUST00000098548 Cd84Q18PI6 329 aa17.84■□□□□ 0.45
Scn1b-201ENSMUST00000098548 ParlQ5XJY4 377 aa17.84■□□□□ 0.45
Scn1b-201ENSMUST00000098548 Rhebl1Q9D8T3 184 aa17.84■□□□□ 0.45
Scn1b-201ENSMUST00000098548 BC067074F6RXI4 2391 aa17.84■□□□□ 0.45
Scn1b-201ENSMUST00000098548 Trbv3A0A0A6YYE2 117 aa17.83■□□□□ 0.45
Scn1b-201ENSMUST00000098548 Ighv1-69A0A0G2JFS5 117 aa17.83■□□□□ 0.45
Scn1b-201ENSMUST00000098548 Gm15557A6PWY0 234 aa17.83■□□□□ 0.45
Scn1b-201ENSMUST00000098548 Lynx1P0DP60 116 aa17.83■□□□□ 0.45
Scn1b-201ENSMUST00000098548 Ube2g2P60605 165 aa17.83■□□□□ 0.45
Scn1b-201ENSMUST00000098548 Olfr1323Q8VF35 309 aa17.83■□□□□ 0.45
Scn1b-201ENSMUST00000098548 Igkv4-57A0A0A6YYE7 117 aa17.83■□□□□ 0.44
Scn1b-201ENSMUST00000098548 Edn2P22389 175 aa17.83■□□□□ 0.44
Scn1b-201ENSMUST00000098548 PpoxP51175 477 aa17.83■□□□□ 0.44
Scn1b-201ENSMUST00000098548 Plp1P60202 277 aa17.83■□□□□ 0.44
Scn1b-201ENSMUST00000098548 Defb26Q30KN7 186 aa17.83■□□□□ 0.44
Scn1b-201ENSMUST00000098548 Q497N7 227 aa17.83■□□□□ 0.44
Scn1b-201ENSMUST00000098548 Pitpnc1Q8K4R4 332 aa17.83■□□□□ 0.44
Scn1b-201ENSMUST00000098548 Olfr1228Q8VGM9 323 aa17.83■□□□□ 0.44
Scn1b-201ENSMUST00000098548 Ighv1-39A0A075B5V5 117 aa17.82■□□□□ 0.44
Scn1b-201ENSMUST00000098548 Mfge8P21956 463 aaKnown RBP17.82■□□□□ 0.44
Scn1b-201ENSMUST00000098548 Gls2Q571F8 602 aa17.82■□□□□ 0.44
Scn1b-201ENSMUST00000098548 Olfr263Q7TQT8 317 aa17.82■□□□□ 0.44
Scn1b-201ENSMUST00000098548 Olfr1535Q7TQU0 326 aa17.82■□□□□ 0.44
Scn1b-201ENSMUST00000098548 B430305J03RikQ8BQQ8 176 aa17.82■□□□□ 0.44
Scn1b-201ENSMUST00000098548 Tmem128Q9CZB9 163 aa17.82■□□□□ 0.44
Scn1b-201ENSMUST00000098548 Cml1Q9JIZ0 222 aa17.82■□□□□ 0.44
Scn1b-201ENSMUST00000098548 Crybb3Q9JJU9 211 aa17.82■□□□□ 0.44
Scn1b-201ENSMUST00000098548 Cxcl14Q9WUQ5 99 aa17.82■□□□□ 0.44
Scn1b-201ENSMUST00000098548 Gata2O09100 480 aa17.81■□□□□ 0.44
Scn1b-201ENSMUST00000098548 Fam241aQ9CZL2 131 aa17.81■□□□□ 0.44
Scn1b-201ENSMUST00000098548 Gpr34Q9R1K6 375 aa17.81■□□□□ 0.44
Scn1b-201ENSMUST00000098548 1700009N14RikQ14AA6 216 aaKnown RBP17.8■□□□□ 0.44
Scn1b-201ENSMUST00000098548 Gm4763Q8CFJ5 196 aa17.8■□□□□ 0.44
Scn1b-201ENSMUST00000098548 SpartQ8R1X6 671 aa17.8■□□□□ 0.44
Scn1b-201ENSMUST00000098548 Olfr124Q8VGW6 315 aa17.8■□□□□ 0.44
Scn1b-201ENSMUST00000098548 Ndufa6Q9CQZ5 131 aaKnown RBP17.8■□□□□ 0.44
Scn1b-201ENSMUST00000098548 Gng10Q9CXP8 68 aa17.8■□□□□ 0.44
Scn1b-201ENSMUST00000098548 Zfp462B1AWL2 2495 aaKnown RBP17.79■□□□□ 0.44
Scn1b-201ENSMUST00000098548 Bloc1s1O55102 125 aa17.79■□□□□ 0.44
Scn1b-201ENSMUST00000098548 Olfr148Q60887 310 aa17.79■□□□□ 0.44
Scn1b-201ENSMUST00000098548 Rgs13Q8K443 158 aa17.79■□□□□ 0.44
Scn1b-201ENSMUST00000098548 Scgb1b27Q91WB5 92 aa17.79■□□□□ 0.44
Scn1b-201ENSMUST00000098548 Anapc16Q9CPV2 110 aa17.79■□□□□ 0.44
Scn1b-201ENSMUST00000098548 Rnase4Q9JJH1 148 aa17.79■□□□□ 0.44
Scn1b-201ENSMUST00000098548 Kcnip3Q9QXT8 256 aa17.79■□□□□ 0.44
Scn1b-201ENSMUST00000098548 Pus1Q9WU56 423 aa17.79■□□□□ 0.44
Scn1b-201ENSMUST00000098548 Gm10020E9QAZ2 204 aa17.79■□□□□ 0.44
Scn1b-201ENSMUST00000098548 Gm3072F6SKY8 209 aa17.79■□□□□ 0.44
Scn1b-201ENSMUST00000098548 Gm17654F7AXR3 209 aa17.79■□□□□ 0.44
Scn1b-201ENSMUST00000098548 P0C1Z5 52 aa17.79■□□□□ 0.44
Scn1b-201ENSMUST00000098548 Gm9949Q8C9F4 104 aa17.79■□□□□ 0.44
Scn1b-201ENSMUST00000098548 Olfr127Q8VF25 323 aa17.79■□□□□ 0.44
Scn1b-201ENSMUST00000098548 Olfr1295Q8VF48 312 aa17.79■□□□□ 0.44
Scn1b-201ENSMUST00000098548 Zfand2bQ91X58 257 aa17.79■□□□□ 0.44
Scn1b-201ENSMUST00000098548 EppinQ9DA01 134 aa17.79■□□□□ 0.44
Scn1b-201ENSMUST00000098548 Olfr1326-ps1A0A140T8J7 311 aa17.78■□□□□ 0.44
Scn1b-201ENSMUST00000098548 Olfr748E9Q9Z0 307 aa17.78■□□□□ 0.44
Scn1b-201ENSMUST00000098548 Phxr2P15972 65 aa17.78■□□□□ 0.44
Scn1b-201ENSMUST00000098548 Ube2l3P68037 154 aaKnown RBP17.78■□□□□ 0.44
Scn1b-201ENSMUST00000098548 Trav15-1-dv6-1Q5R1D2 117 aa17.78■□□□□ 0.44
Scn1b-201ENSMUST00000098548 Srsf12Q8C8K3 266 aa17.78■□□□□ 0.44
Scn1b-201ENSMUST00000098548 Chac2Q9CQG1 178 aa17.78■□□□□ 0.44
Scn1b-201ENSMUST00000098548 Olfr959Q9EQ86 311 aa17.78■□□□□ 0.44
Scn1b-201ENSMUST00000098548 Fbn1Q61554 2873 aaKnown RBP17.77■□□□□ 0.44
Scn1b-201ENSMUST00000098548 Igkv1-132A0A0B4J1H9 120 aa17.77■□□□□ 0.44
Scn1b-201ENSMUST00000098548 Mettl23A2AA28 253 aa17.77■□□□□ 0.44
Scn1b-201ENSMUST00000098548 Gm5294J3QP53 216 aa17.77■□□□□ 0.44
Scn1b-201ENSMUST00000098548 Srsf2Q62093 221 aaKnown RBP17.77■□□□□ 0.44
Scn1b-201ENSMUST00000098548 Znf329Q6GQR8 522 aa17.77■□□□□ 0.44
Scn1b-201ENSMUST00000098548 Mob4Q6PEB6 225 aa17.77■□□□□ 0.44
Scn1b-201ENSMUST00000098548 Tmem129Q8K304 362 aa17.77■□□□□ 0.44
Scn1b-201ENSMUST00000098548 Olfr1189A2AV11 306 aa17.76■□□□□ 0.43
Scn1b-201ENSMUST00000098548 Hbb-bh2B2RVB7 147 aa17.76■□□□□ 0.43
Scn1b-201ENSMUST00000098548 Gm21060J3KMU4 56 aa17.76■□□□□ 0.43
Scn1b-201ENSMUST00000098548 TymsP07607 307 aa17.76■□□□□ 0.43
Scn1b-201ENSMUST00000098548 Rpl23P62830 140 aaKnown RBP17.76■□□□□ 0.43
Scn1b-201ENSMUST00000098548 ElobP62869 118 aa17.76■□□□□ 0.43
Scn1b-201ENSMUST00000098548 Txn2P97493 166 aa17.76■□□□□ 0.43
Scn1b-201ENSMUST00000098548 Tppp2Q0P5Y3 170 aa17.76■□□□□ 0.43
Scn1b-201ENSMUST00000098548 SbsponQ3UPR9 264 aa17.76■□□□□ 0.43
Scn1b-201ENSMUST00000098548 Olfr872E9PVW2 323 aa17.75■□□□□ 0.43
Scn1b-201ENSMUST00000098548 BC030500E9Q6W0 185 aa17.75■□□□□ 0.43
Scn1b-201ENSMUST00000098548 Rab5bP61021 215 aa17.75■□□□□ 0.43
Scn1b-201ENSMUST00000098548 Spint3Q3UW09 88 aa17.75■□□□□ 0.43
Scn1b-201ENSMUST00000098548 Slamf7Q8BHK6 333 aa17.75■□□□□ 0.43
Scn1b-201ENSMUST00000098548 Rnase2aQ8K196 155 aa17.75■□□□□ 0.43
Scn1b-201ENSMUST00000098548 Olfr577Q8VH11 312 aa17.75■□□□□ 0.43
Scn1b-201ENSMUST00000098548 Gatad1Q920S3 266 aa17.75■□□□□ 0.43
Retrieved 100 of 22,080 RNA–protein pairs in 32.9 ms