RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 Gm21874J3QNZ6 232 aa15.02□□□□□ -0.01
Shkbp1-201ENSMUST00000003857 P18532 116 aa15.02□□□□□ -0.01
Shkbp1-201ENSMUST00000003857 SelplgQ62170 397 aa15.02□□□□□ -0.01
Shkbp1-201ENSMUST00000003857 Gm9944Q8C559 102 aa15.02□□□□□ -0.01
Shkbp1-201ENSMUST00000003857 OtosQ8R448 89 aa15.02□□□□□ -0.01
Shkbp1-201ENSMUST00000003857 Wfdc11A2A5H7 82 aa15.01□□□□□ -0.01
Shkbp1-201ENSMUST00000003857 P01723 117 aa15.01□□□□□ -0.01
Shkbp1-201ENSMUST00000003857 Ccl11P48298 97 aa15.01□□□□□ -0.01
Shkbp1-201ENSMUST00000003857 Fosl1P48755 273 aa15.01□□□□□ -0.01
Shkbp1-201ENSMUST00000003857 Slc25a5P51881 298 aaKnown RBP15.01□□□□□ -0.01
Shkbp1-201ENSMUST00000003857 Ifna11Q61716 190 aa15.01□□□□□ -0.01
Shkbp1-201ENSMUST00000003857 Gm10277Q6R5C6 214 aa15.01□□□□□ -0.01
Shkbp1-201ENSMUST00000003857 Fam19a2Q7TPG7 131 aa15.01□□□□□ -0.01
Shkbp1-201ENSMUST00000003857 Olfr959Q9EQ86 311 aa15.01□□□□□ -0.01
Shkbp1-201ENSMUST00000003857 Pla2g2eQ9QUL3 142 aa15.01□□□□□ -0.01
Shkbp1-201ENSMUST00000003857 Vma21-psA0A140T8R2 101 aa15□□□□□ -0.01
Shkbp1-201ENSMUST00000003857 CtsgP28293 261 aa15□□□□□ -0.01
Shkbp1-201ENSMUST00000003857 Ube2g1P62254 170 aa15□□□□□ -0.01
Shkbp1-201ENSMUST00000003857 SrstQ06666 185 aa15□□□□□ -0.01
Shkbp1-201ENSMUST00000003857 RprmlQ3URD2 117 aa15□□□□□ -0.01
Shkbp1-201ENSMUST00000003857 AtrxQ61687 2476 aaKnown RBP15□□□□□ -0.01
Shkbp1-201ENSMUST00000003857 DysfQ9ESD7 2090 aa15□□□□□ -0.01
Shkbp1-201ENSMUST00000003857 Trav14n-3A0A075B645 120 aa15□□□□□ -0.01
Shkbp1-201ENSMUST00000003857 Zfp979A2A799 407 aa15□□□□□ -0.01
Shkbp1-201ENSMUST00000003857 Gm12886B1AZM5 119 aa15□□□□□ -0.01
Shkbp1-201ENSMUST00000003857 ElaneQ3UP87 265 aa15□□□□□ -0.01
Shkbp1-201ENSMUST00000003857 Dnd1Q6VY05 352 aa15□□□□□ -0.01
Shkbp1-201ENSMUST00000003857 Cldn16Q925N4 235 aa15□□□□□ -0.01
Shkbp1-201ENSMUST00000003857 Nhp2Q9CRB2 153 aaKnown RBP15□□□□□ -0.01
Shkbp1-201ENSMUST00000003857 Fkbp11Q9D1M7 201 aa15□□□□□ -0.01
Shkbp1-201ENSMUST00000003857 Olfr715bE9Q725 315 aa14.99□□□□□ -0.01
Shkbp1-201ENSMUST00000003857 P01783 136 aa14.99□□□□□ -0.01
Shkbp1-201ENSMUST00000003857 MgpP19788 104 aa14.99□□□□□ -0.01
Shkbp1-201ENSMUST00000003857 Dtx1Q61010 627 aa14.99□□□□□ -0.01
Shkbp1-201ENSMUST00000003857 Ttc9cQ810A3 171 aa14.99□□□□□ -0.01
Shkbp1-201ENSMUST00000003857 Znf641Q8BZ34 422 aa14.99□□□□□ -0.01
Shkbp1-201ENSMUST00000003857 Vmn1r202Q8R259 302 aa14.99□□□□□ -0.01
Shkbp1-201ENSMUST00000003857 Gm6970F7DCP6 221 aa14.99□□□□□ -0.01
Shkbp1-201ENSMUST00000003857 Nxph4G3X9N5 304 aa14.99□□□□□ -0.01
Shkbp1-201ENSMUST00000003857 Map6d1Q14BB9 191 aa14.99□□□□□ -0.01
Shkbp1-201ENSMUST00000003857 Oosp2Q4FZG8 168 aa14.99□□□□□ -0.01
Shkbp1-201ENSMUST00000003857 Trav3-3Q5R1C3 114 aa14.99□□□□□ -0.01
Shkbp1-201ENSMUST00000003857 Gm12689Q8BQU9 117 aa14.99□□□□□ -0.01
Shkbp1-201ENSMUST00000003857 Rnase2aQ8K196 155 aa14.99□□□□□ -0.01
Shkbp1-201ENSMUST00000003857 Olfr303Q8VFP0 319 aa14.99□□□□□ -0.01
Shkbp1-201ENSMUST00000003857 Olfr816Q8VFU2 312 aa14.99□□□□□ -0.01
Shkbp1-201ENSMUST00000003857 Fam103a1Q9CQY2 119 aaKnown RBP14.99□□□□□ -0.01
Shkbp1-201ENSMUST00000003857 Necap2Q9D1J1 266 aa14.99□□□□□ -0.01
Shkbp1-201ENSMUST00000003857 Ammecr1Q9JHT5 344 aaKnown RBP14.99□□□□□ -0.01
Shkbp1-201ENSMUST00000003857 B1ARW8 110 aa14.98□□□□□ -0.01
Shkbp1-201ENSMUST00000003857 SlpiP97430 131 aa14.98□□□□□ -0.01
Shkbp1-201ENSMUST00000003857 Pilrb2Q2YFS1 225 aa14.98□□□□□ -0.01
Shkbp1-201ENSMUST00000003857 B020031M17RikQ3UT11 173 aa14.98□□□□□ -0.01
Shkbp1-201ENSMUST00000003857 Megf10Q6DIB5 1147 aa14.98□□□□□ -0.01
Shkbp1-201ENSMUST00000003857 Tmem140Q8BGY5 185 aa14.98□□□□□ -0.01
Shkbp1-201ENSMUST00000003857 Ms4a12A0A087WSB9 263 aa14.98□□□□□ -0.01
Shkbp1-201ENSMUST00000003857 Gm4565A0A140LJ87 301 aa14.98□□□□□ -0.01
Shkbp1-201ENSMUST00000003857 Gm6176J3QK59 301 aa14.98□□□□□ -0.01
Shkbp1-201ENSMUST00000003857 Gm4567Q3UTA8 301 aa14.98□□□□□ -0.01
Shkbp1-201ENSMUST00000003857 A730015C16RikQ8C992 119 aa14.98□□□□□ -0.01
Shkbp1-201ENSMUST00000003857 Slc17a9Q8VCL5 447 aa14.98□□□□□ -0.01
Shkbp1-201ENSMUST00000003857 Ros1Q78DX7 2340 aa14.97□□□□□ -0.01
Shkbp1-201ENSMUST00000003857 Cox6a1P43024 111 aa14.97□□□□□ -0.01
Shkbp1-201ENSMUST00000003857 Bst1Q64277 311 aa14.97□□□□□ -0.01
Shkbp1-201ENSMUST00000003857 Dkk4Q8VEJ3 221 aa14.97□□□□□ -0.01
Shkbp1-201ENSMUST00000003857 Gm14214V9GX35 225 aa14.97□□□□□ -0.01
Shkbp1-201ENSMUST00000003857 Cnot1Q6ZQ08 2375 aaKnown RBP14.97□□□□□ -0.01
Shkbp1-201ENSMUST00000003857 Ighv5-16A0A0B4J1P4 117 aa14.97□□□□□ -0.01
Shkbp1-201ENSMUST00000003857 Trbv26A0A0B4J1P5 115 aa14.97□□□□□ -0.01
Shkbp1-201ENSMUST00000003857 Rnf5O35445 180 aa14.97□□□□□ -0.01
Shkbp1-201ENSMUST00000003857 Cd79bP15530 228 aa14.97□□□□□ -0.01
Shkbp1-201ENSMUST00000003857 Olfr961Q9EQ84 314 aa14.97□□□□□ -0.01
Shkbp1-201ENSMUST00000003857 Ramp1Q9WTJ5 148 aa14.97□□□□□ -0.01
Shkbp1-201ENSMUST00000003857 PoleQ9WVF7 2283 aa14.96□□□□□ -0.01
Shkbp1-201ENSMUST00000003857 Olfr364-ps1A0A140T8Q2 307 aa14.96□□□□□ -0.01
Shkbp1-201ENSMUST00000003857 Gm3285A0A1W2P7U0 201 aa14.96□□□□□ -0.01
Shkbp1-201ENSMUST00000003857 Txn2P97493 166 aa14.96□□□□□ -0.01
Shkbp1-201ENSMUST00000003857 Pex7P97865 318 aa14.96□□□□□ -0.01
Shkbp1-201ENSMUST00000003857 AsipQ03288 131 aa14.96□□□□□ -0.01
Shkbp1-201ENSMUST00000003857 Gm10192Q3V0S1 108 aa14.96□□□□□ -0.01
Shkbp1-201ENSMUST00000003857 Fbln7Q501P1 440 aa14.96□□□□□ -0.01
Shkbp1-201ENSMUST00000003857 Neil2Q6R2P8 329 aa14.96□□□□□ -0.01
Shkbp1-201ENSMUST00000003857 Slamf7Q8BHK6 333 aa14.96□□□□□ -0.01
Shkbp1-201ENSMUST00000003857 Rbm14Q8C2Q3 669 aaKnown RBP14.96□□□□□ -0.01
Shkbp1-201ENSMUST00000003857 Vstm5Q9D806 199 aa14.96□□□□□ -0.01
Shkbp1-201ENSMUST00000003857 Plpp2Q9DAX2 276 aa14.96□□□□□ -0.01
Shkbp1-201ENSMUST00000003857 Tcrg-C2A0A075B5Z2 167 aa14.96□□□□□ -0.02
Shkbp1-201ENSMUST00000003857 Gm20379A0A087WR34 119 aa14.96□□□□□ -0.02
Shkbp1-201ENSMUST00000003857 P01853 167 aa14.96□□□□□ -0.02
Shkbp1-201ENSMUST00000003857 Gcm1P70348 436 aa14.96□□□□□ -0.02
Shkbp1-201ENSMUST00000003857 Olfr1381Q7TQT4 311 aa14.96□□□□□ -0.02
Shkbp1-201ENSMUST00000003857 Olfr1373Q7TQT6 311 aa14.96□□□□□ -0.02
Shkbp1-201ENSMUST00000003857 Rhbdd1Q8BHC7 315 aa14.96□□□□□ -0.02
Shkbp1-201ENSMUST00000003857 Gm9949Q8C9F4 104 aa14.96□□□□□ -0.02
Shkbp1-201ENSMUST00000003857 Gm9958Q8C9U4 106 aa14.96□□□□□ -0.02
Shkbp1-201ENSMUST00000003857 Necap1Q9CR95 275 aa14.96□□□□□ -0.02
Shkbp1-201ENSMUST00000003857 Tmub1Q9JMG3 245 aa14.96□□□□□ -0.02
Shkbp1-201ENSMUST00000003857 Osr1Q9WVG7 266 aa14.96□□□□□ -0.02
Shkbp1-201ENSMUST00000003857 Map1aQ9QYR6 2776 aa14.95□□□□□ -0.02
Shkbp1-201ENSMUST00000003857 E030018B13RikJ3QMS9 113 aa14.95□□□□□ -0.02
Retrieved 100 of 22,080 RNA–protein pairs in 47.7 ms