RNA–Protein interactions for RNA: ENST00000642137.1

LINC00339-213, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 222 nt, Biotype transcribed processed pseudogene, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-213ENST00000642137 OR5A1Q8NGJ0 315 aa8.33□□□□□ -1.08
LINC00339-213ENST00000642137 KLK12Q9UKR0 248 aa8.33□□□□□ -1.08
LINC00339-213ENST00000642137 IGIPA6NJ69 53 aa8.32□□□□□ -1.08
LINC00339-213ENST00000642137 PDZD11Q5EBL8 140 aa8.32□□□□□ -1.08
LINC00339-213ENST00000642137 TMEM141Q96I45 108 aa8.32□□□□□ -1.08
LINC00339-213ENST00000642137 SCGB3A1Q96QR1 104 aa8.32□□□□□ -1.08
LINC00339-213ENST00000642137 TIMM17AQ99595 171 aa8.32□□□□□ -1.08
LINC00339-213ENST00000642137 VPS13DQ5THJ4 4388 aa8.32□□□□□ -1.08
LINC00339-213ENST00000642137 PMCHL1Q16048 86 aa8.31□□□□□ -1.08
LINC00339-213ENST00000642137 Q6ZR54 194 aa8.31□□□□□ -1.08
LINC00339-213ENST00000642137 FAM19A2Q8N3H0 131 aa8.31□□□□□ -1.08
LINC00339-213ENST00000642137 FAM104AQ969W3 186 aa8.31□□□□□ -1.08
LINC00339-213ENST00000642137 PRR34Q9NV39 138 aa8.31□□□□□ -1.08
LINC00339-213ENST00000642137 IGLV4-3A0A075B6K6 122 aa8.3□□□□□ -1.08
LINC00339-213ENST00000642137 PAPPA-AS1Q5QFB9 102 aa8.3□□□□□ -1.08
LINC00339-213ENST00000642137 ENHOQ6UWT2 76 aa8.3□□□□□ -1.08
LINC00339-213ENST00000642137 LINC00269Q8N2A0 174 aa8.3□□□□□ -1.08
LINC00339-213ENST00000642137 TRAV8-3A0A0A6YYJ7 113 aa8.29□□□□□ -1.08
LINC00339-213ENST00000642137 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.29□□□□□ -1.08
LINC00339-213ENST00000642137 M0R2N4 97 aa8.29□□□□□ -1.08
LINC00339-213ENST00000642137 ATP5LO75964 103 aa8.29□□□□□ -1.08
LINC00339-213ENST00000642137 S100A6P06703 90 aa8.29□□□□□ -1.08
LINC00339-213ENST00000642137 REG3AQ06141 175 aa8.29□□□□□ -1.08
LINC00339-213ENST00000642137 OPRPNQ99935 248 aaPredicted RBP8.29□□□□□ -1.08
LINC00339-213ENST00000642137 KRTAP1-5Q9BYS1 174 aa8.29□□□□□ -1.08
LINC00339-213ENST00000642137 ALMS1Q8TCU4 4167 aa8.29□□□□□ -1.08
LINC00339-213ENST00000642137 TRAV8-4A0A0B4J246 113 aa8.28□□□□□ -1.08
LINC00339-213ENST00000642137 CCL25O15444 150 aa8.28□□□□□ -1.08
LINC00339-213ENST00000642137 LEPROTL1O95214 131 aa8.28□□□□□ -1.08
LINC00339-213ENST00000642137 CRPP02741 224 aa8.28□□□□□ -1.08
LINC00339-213ENST00000642137 MIAQ16674 131 aa8.28□□□□□ -1.08
LINC00339-213ENST00000642137 Q6ZN92 141 aa8.28□□□□□ -1.08
LINC00339-213ENST00000642137 Q6ZUT4 128 aa8.28□□□□□ -1.08
LINC00339-213ENST00000642137 UBE2WQ96B02 151 aa8.28□□□□□ -1.08
LINC00339-213ENST00000642137 AMELXQ99217 191 aa8.28□□□□□ -1.08
LINC00339-213ENST00000642137 LYSTQ99698 3801 aa8.28□□□□□ -1.08
LINC00339-213ENST00000642137 VCX2Q9H322 139 aa8.28□□□□□ -1.08
LINC00339-213ENST00000642137 TEX43Q6ZNM6 134 aa8.27□□□□□ -1.09
LINC00339-213ENST00000642137 PACRGQ96M98 296 aaPredicted RBP8.27□□□□□ -1.09
LINC00339-213ENST00000642137 LINC00959A0A1B0GUT2 108 aa8.26□□□□□ -1.09
LINC00339-213ENST00000642137 SS18Q15532 418 aa8.26□□□□□ -1.09
LINC00339-213ENST00000642137 RNASE13Q5GAN3 156 aaKnown RBP8.26□□□□□ -1.09
LINC00339-213ENST00000642137 NFE4Q86UQ8 179 aa8.26□□□□□ -1.09
LINC00339-213ENST00000642137 IFI27L1Q96BM0 104 aa8.26□□□□□ -1.09
LINC00339-213ENST00000642137 RMI2Q96E14 147 aa8.26□□□□□ -1.09
LINC00339-213ENST00000642137 HSPB8Q9UJY1 196 aa8.26□□□□□ -1.09
LINC00339-213ENST00000642137 DNAH1Q9P2D7 4330 aa8.25□□□□□ -1.09
LINC00339-213ENST00000642137 IGKV3OR2-268A0A0C4DH90 116 aa8.25□□□□□ -1.09
LINC00339-213ENST00000642137 C5orf52A6NGY3 159 aa8.25□□□□□ -1.09
LINC00339-213ENST00000642137 FABP4P15090 132 aa8.25□□□□□ -1.09
LINC00339-213ENST00000642137 SNRPEP62304 92 aaKnown RBP8.25□□□□□ -1.09
LINC00339-213ENST00000642137 PMVKQ15126 192 aa8.25□□□□□ -1.09
LINC00339-213ENST00000642137 CLPSL2Q6UWE3 100 aa8.25□□□□□ -1.09
LINC00339-213ENST00000642137 LINC00173Q6ZV60 143 aa8.25□□□□□ -1.09
LINC00339-213ENST00000642137 C6orf223Q8N319 242 aa8.25□□□□□ -1.09
LINC00339-213ENST00000642137 BAALCQ8WXS3 180 aa8.25□□□□□ -1.09
LINC00339-213ENST00000642137 C2orf88Q9BSF0 95 aa8.25□□□□□ -1.09
LINC00339-213ENST00000642137 TM2D2Q9BX73 214 aa8.25□□□□□ -1.09
LINC00339-213ENST00000642137 COX11Q9Y6N1 276 aa8.25□□□□□ -1.09
LINC00339-213ENST00000642137 IFITM10A6NMD0 228 aa8.24□□□□□ -1.09
LINC00339-213ENST00000642137 PRSS1P07477 247 aa8.24□□□□□ -1.09
LINC00339-213ENST00000642137 C1orf134Q5TEV5 83 aa8.24□□□□□ -1.09
LINC00339-213ENST00000642137 ZC2HC1BQ5TFG8 222 aa8.24□□□□□ -1.09
LINC00339-213ENST00000642137 C1orf43Q9BWL3 253 aa8.24□□□□□ -1.09
LINC00339-213ENST00000642137 CST9LQ9H4G1 147 aa8.24□□□□□ -1.09
LINC00339-213ENST00000642137 Q9HAA7 133 aa8.24□□□□□ -1.09
LINC00339-213ENST00000642137 TRAV13-1A0A0B4J241 112 aa8.23□□□□□ -1.09
LINC00339-213ENST00000642137 PRSS29PA6NIE9 313 aa8.23□□□□□ -1.09
LINC00339-213ENST00000642137 UBE2D1P51668 147 aa8.23□□□□□ -1.09
LINC00339-213ENST00000642137 FAM19A3Q7Z5A8 133 aa8.23□□□□□ -1.09
LINC00339-213ENST00000642137 HIST3H2BBQ8N257 126 aa8.23□□□□□ -1.09
LINC00339-213ENST00000642137 DNAH6Q9C0G6 4158 aa8.22□□□□□ -1.09
LINC00339-213ENST00000642137 IGKV2D-24A0A075B6R9 120 aa8.22□□□□□ -1.09
LINC00339-213ENST00000642137 TRAV12-1A0A0B4J245 112 aa8.22□□□□□ -1.09
LINC00339-213ENST00000642137 S100A2P29034 98 aa8.22□□□□□ -1.09
LINC00339-213ENST00000642137 KRTAP26-1Q6PEX3 210 aa8.22□□□□□ -1.09
LINC00339-213ENST00000642137 CHCHD10Q8WYQ3 142 aaPredicted RBP8.22□□□□□ -1.09
LINC00339-213ENST00000642137 KMT2AQ03164 3969 aa8.22□□□□□ -1.09
LINC00339-213ENST00000642137 IGLV10-54A0A075B6I4 117 aa8.21□□□□□ -1.1
LINC00339-213ENST00000642137 SEC11AP67812 179 aa8.21□□□□□ -1.1
LINC00339-213ENST00000642137 LINC00242Q5T6M2 205 aa8.21□□□□□ -1.1
LINC00339-213ENST00000642137 CD164L2Q6UWJ8 174 aa8.21□□□□□ -1.1
LINC00339-213ENST00000642137 Q6ZRN7 208 aaPredicted RBP8.21□□□□□ -1.1
LINC00339-213ENST00000642137 MAP1LC3CQ9BXW4 147 aa8.21□□□□□ -1.1
LINC00339-213ENST00000642137 SACSQ9NZJ4 4579 aa8.2□□□□□ -1.1
LINC00339-213ENST00000642137 TINCRA0A1B0GVN0 87 aa8.19□□□□□ -1.1
LINC00339-213ENST00000642137 GAGE12HA6NDE8 117 aa8.19□□□□□ -1.1
LINC00339-213ENST00000642137 XCL1P47992 114 aa8.19□□□□□ -1.1
LINC00339-213ENST00000642137 SPATA12Q7Z6I5 190 aa8.19□□□□□ -1.1
LINC00339-213ENST00000642137 HIST1H2BLQ99880 126 aa8.19□□□□□ -1.1
LINC00339-213ENST00000642137 TMA7Q9Y2S6 64 aaKnown RBP8.19□□□□□ -1.1
LINC00339-213ENST00000642137 CHTOPQ9Y3Y2 248 aaKnown RBP8.19□□□□□ -1.1
LINC00339-213ENST00000642137 IGHV3OR16-9A0A0B4J2B5 98 aa8.18□□□□□ -1.1
LINC00339-213ENST00000642137 A0A0J9YXV3 536 aa8.18□□□□□ -1.1
LINC00339-213ENST00000642137 PSCAO43653 123 aa8.18□□□□□ -1.1
LINC00339-213ENST00000642137 IGLC3P0DOY3 106 aa8.18□□□□□ -1.1
LINC00339-213ENST00000642137 HERVK_113P63121 156 aa8.18□□□□□ -1.1
LINC00339-213ENST00000642137 COX6A2Q02221 97 aa8.18□□□□□ -1.1
LINC00339-213ENST00000642137 FOXI1Q12951 378 aa8.18□□□□□ -1.1
LINC00339-213ENST00000642137 HYDINQ4G0P3 5121 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms