RNA–Protein interactions for RNA: ENST00000641491.1

PHGDH-218, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-218ENST00000641491 TEX43Q6ZNM6 134 aa8.86□□□□□ -0.99
PHGDH-218ENST00000641491 MRPL52Q86TS9 123 aaKnown RBP8.86□□□□□ -0.99
PHGDH-218ENST00000641491 TOMM6Q96B49 74 aa8.86□□□□□ -0.99
PHGDH-218ENST00000641491 TMEM141Q96I45 108 aa8.86□□□□□ -0.99
PHGDH-218ENST00000641491 A0A1B0GUV1 79 aa8.85□□□□□ -0.99
PHGDH-218ENST00000641491 LINC01546A6NGU7 62 aa8.85□□□□□ -0.99
PHGDH-218ENST00000641491 LEPROTL1O95214 131 aa8.85□□□□□ -0.99
PHGDH-218ENST00000641491 Q8N976 141 aa8.85□□□□□ -0.99
PHGDH-218ENST00000641491 UBE2WQ96B02 151 aa8.85□□□□□ -0.99
PHGDH-218ENST00000641491 TIMM21Q9BVV7 248 aa8.85□□□□□ -0.99
PHGDH-218ENST00000641491 VCX2Q9H322 139 aa8.85□□□□□ -0.99
PHGDH-218ENST00000641491 KLK12Q9UKR0 248 aa8.85□□□□□ -0.99
PHGDH-218ENST00000641491 TMA7Q9Y2S6 64 aaKnown RBP8.85□□□□□ -0.99
PHGDH-218ENST00000641491 UBE2D4Q9Y2X8 147 aa8.85□□□□□ -0.99
PHGDH-218ENST00000641491 STARD9Q9P2P6 4700 aa8.84□□□□□ -0.99
PHGDH-218ENST00000641491 TRAV8-3A0A0A6YYJ7 113 aa8.84□□□□□ -0.99
PHGDH-218ENST00000641491 NBDYA0A0U1RRE5 68 aa8.84□□□□□ -0.99
PHGDH-218ENST00000641491 NPSP0C0P6 89 aa8.84□□□□□ -0.99
PHGDH-218ENST00000641491 ERASQ7Z444 233 aa8.84□□□□□ -0.99
PHGDH-218ENST00000641491 ZNF664Q8N3J9 261 aa8.84□□□□□ -0.99
PHGDH-218ENST00000641491 TIMM17AQ99595 171 aa8.84□□□□□ -0.99
PHGDH-218ENST00000641491 PYGO1Q9Y3Y4 419 aa8.84□□□□□ -0.99
PHGDH-218ENST00000641491 IFITM10A6NMD0 228 aa8.83□□□□□ -1
PHGDH-218ENST00000641491 PSCAO43653 123 aa8.83□□□□□ -1
PHGDH-218ENST00000641491 SS18Q15532 418 aa8.83□□□□□ -1
PHGDH-218ENST00000641491 CLPSL2Q6UWE3 100 aa8.83□□□□□ -1
PHGDH-218ENST00000641491 NFE4Q86UQ8 179 aa8.83□□□□□ -1
PHGDH-218ENST00000641491 LINC00269Q8N2A0 174 aa8.83□□□□□ -1
PHGDH-218ENST00000641491 FAM19A2Q8N3H0 131 aa8.83□□□□□ -1
PHGDH-218ENST00000641491 Q9HAA7 133 aa8.83□□□□□ -1
PHGDH-218ENST00000641491 CSDC2Q9Y534 153 aaKnown RBP8.83□□□□□ -1
PHGDH-218ENST00000641491 M0R2N4 97 aa8.82□□□□□ -1
PHGDH-218ENST00000641491 PRSS1P07477 247 aa8.82□□□□□ -1
PHGDH-218ENST00000641491 FABP4P15090 132 aa8.82□□□□□ -1
PHGDH-218ENST00000641491 REG3AQ06141 175 aa8.82□□□□□ -1
PHGDH-218ENST00000641491 PDZD11Q5EBL8 140 aa8.82□□□□□ -1
PHGDH-218ENST00000641491 Q6ZUT4 128 aa8.82□□□□□ -1
PHGDH-218ENST00000641491 C1orf43Q9BWL3 253 aa8.82□□□□□ -1
PHGDH-218ENST00000641491 TM2D2Q9BX73 214 aa8.82□□□□□ -1
PHGDH-218ENST00000641491 COX11Q9Y6N1 276 aa8.82□□□□□ -1
PHGDH-218ENST00000641491 H0Y8G0 127 aa8.81□□□□□ -1
PHGDH-218ENST00000641491 MRPS36P82909 103 aaKnown RBP8.81□□□□□ -1
PHGDH-218ENST00000641491 MIAQ16674 131 aa8.81□□□□□ -1
PHGDH-218ENST00000641491 URB1-AS1Q96HZ7 61 aa8.81□□□□□ -1
PHGDH-218ENST00000641491 MAP1LC3CQ9BXW4 147 aa8.81□□□□□ -1
PHGDH-218ENST00000641491 PCLOQ9Y6V0 5065 aa8.8□□□□□ -1
PHGDH-218ENST00000641491 IGLV4-60A0A075B6I1 120 aa8.8□□□□□ -1
PHGDH-218ENST00000641491 IGKV2D-24A0A075B6R9 120 aa8.8□□□□□ -1
PHGDH-218ENST00000641491 TRAV13-1A0A0B4J241 112 aa8.8□□□□□ -1
PHGDH-218ENST00000641491 RNASE13Q5GAN3 156 aaKnown RBP8.8□□□□□ -1
PHGDH-218ENST00000641491 COA6Q5JTJ3 125 aaKnown RBP8.8□□□□□ -1
PHGDH-218ENST00000641491 IFI27L1Q96BM0 104 aa8.8□□□□□ -1
PHGDH-218ENST00000641491 CDC42SE2Q9NRR3 84 aa8.8□□□□□ -1
PHGDH-218ENST00000641491 IGLV4-3A0A075B6K6 122 aa8.79□□□□□ -1
PHGDH-218ENST00000641491 TRAV8-4A0A0B4J246 113 aa8.79□□□□□ -1
PHGDH-218ENST00000641491 IBA57-AS1B1ANH7 110 aa8.79□□□□□ -1
PHGDH-218ENST00000641491 CCL25O15444 150 aa8.79□□□□□ -1
PHGDH-218ENST00000641491 SEC11AP67812 179 aa8.79□□□□□ -1
PHGDH-218ENST00000641491 PACRGQ96M98 296 aaPredicted RBP8.79□□□□□ -1
PHGDH-218ENST00000641491 C20orf202A1L168 122 aa8.78□□□□□ -1
PHGDH-218ENST00000641491 PMVKQ15126 192 aa8.78□□□□□ -1
PHGDH-218ENST00000641491 Q8N3U1 123 aa8.78□□□□□ -1
PHGDH-218ENST00000641491 GEMIN7Q9H840 131 aaKnown RBP8.78□□□□□ -1
PHGDH-218ENST00000641491 HERC2O95714 4834 aa8.78□□□□□ -1
PHGDH-218ENST00000641491 IGIPA6NJ69 53 aa8.77□□□□□ -1.01
PHGDH-218ENST00000641491 SNRPEP62304 92 aaKnown RBP8.77□□□□□ -1.01
PHGDH-218ENST00000641491 C1orf134Q5TEV5 83 aa8.77□□□□□ -1.01
PHGDH-218ENST00000641491 C6orf223Q8N319 242 aa8.77□□□□□ -1.01
PHGDH-218ENST00000641491 IGLV10-54A0A075B6I4 117 aa8.76□□□□□ -1.01
PHGDH-218ENST00000641491 MALP21145 153 aa8.76□□□□□ -1.01
PHGDH-218ENST00000641491 XCL1P47992 114 aa8.76□□□□□ -1.01
PHGDH-218ENST00000641491 BAALCQ8WXS3 180 aa8.76□□□□□ -1.01
PHGDH-218ENST00000641491 OPRPNQ99935 248 aaPredicted RBP8.76□□□□□ -1.01
PHGDH-218ENST00000641491 PLECQ15149 4684 aaKnown RBP8.75□□□□□ -1.01
PHGDH-218ENST00000641491 A0A096LNJ9 63 aa8.75□□□□□ -1.01
PHGDH-218ENST00000641491 LINC00959A0A1B0GUT2 108 aa8.75□□□□□ -1.01
PHGDH-218ENST00000641491 NUPR1O60356 82 aa8.75□□□□□ -1.01
PHGDH-218ENST00000641491 LINC00310P59036 64 aa8.75□□□□□ -1.01
PHGDH-218ENST00000641491 KRTDAPP60985 99 aa8.75□□□□□ -1.01
PHGDH-218ENST00000641491 PRR34Q9NV39 138 aa8.75□□□□□ -1.01
PHGDH-218ENST00000641491 EREGO14944 169 aa8.74□□□□□ -1.01
PHGDH-218ENST00000641491 AKR1D1P51857 326 aa8.74□□□□□ -1.01
PHGDH-218ENST00000641491 HERVK_113P63121 156 aa8.74□□□□□ -1.01
PHGDH-218ENST00000641491 HIST3H2BBQ8N257 126 aa8.74□□□□□ -1.01
PHGDH-218ENST00000641491 CHCHD10Q8WYQ3 142 aaPredicted RBP8.74□□□□□ -1.01
PHGDH-218ENST00000641491 CHTOPQ9Y3Y2 248 aaKnown RBP8.74□□□□□ -1.01
PHGDH-218ENST00000641491 TRAV12-1A0A0B4J245 112 aa8.73□□□□□ -1.01
PHGDH-218ENST00000641491 GAGE12HA6NDE8 117 aa8.73□□□□□ -1.01
PHGDH-218ENST00000641491 H3BRM9 83 aa8.73□□□□□ -1.01
PHGDH-218ENST00000641491 APOMO95445 188 aa8.73□□□□□ -1.01
PHGDH-218ENST00000641491 ENHOQ6UWT2 76 aa8.73□□□□□ -1.01
PHGDH-218ENST00000641491 AMELXQ99217 191 aa8.73□□□□□ -1.01
PHGDH-218ENST00000641491 CST9LQ9H4G1 147 aa8.73□□□□□ -1.01
PHGDH-218ENST00000641491 PRSS29PA6NIE9 313 aa8.72□□□□□ -1.01
PHGDH-218ENST00000641491 COX7A2LO14548 114 aa8.72□□□□□ -1.01
PHGDH-218ENST00000641491 CFAP161Q6P656 301 aa8.72□□□□□ -1.01
PHGDH-218ENST00000641491 LINC00469Q8N7U9 141 aa8.72□□□□□ -1.01
PHGDH-218ENST00000641491 RYR1P21817 5038 aa8.71□□□□□ -1.02
PHGDH-218ENST00000641491 C5orf52A6NGY3 159 aa8.71□□□□□ -1.02
PHGDH-218ENST00000641491 PLNP26678 52 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 148.1 ms