RNA–Protein interactions for RNA: ENST00000640840.1

PRICKLE1-220, Transcript of prickle planar cell polarity protein 1, humanhuman

TSL 5

Gene PRICKLE1, Length 3,735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE1-220ENST00000640840 IGKV3D-20A0A0C4DH25 116 aa4.27□□□□□ -1.73
PRICKLE1-220ENST00000640840 C10orf126Q8N4M7 172 aa4.27□□□□□ -1.73
PRICKLE1-220ENST00000640840 ZNF56Q15929 161 aa4.26□□□□□ -1.73
PRICKLE1-220ENST00000640840 NEXN-AS1Q8NBZ9 246 aa4.26□□□□□ -1.73
PRICKLE1-220ENST00000640840 RPL39LQ96EH5 51 aaKnown RBP4.26□□□□□ -1.73
PRICKLE1-220ENST00000640840 MDFICQ9P1T7 246 aa4.26□□□□□ -1.73
PRICKLE1-220ENST00000640840 TRAV8-4A0A0B4J246 113 aa4.26□□□□□ -1.73
PRICKLE1-220ENST00000640840 IGHV3-30P01768 117 aa4.26□□□□□ -1.73
PRICKLE1-220ENST00000640840 IGHV3-30-5P0DP03 117 aa4.26□□□□□ -1.73
PRICKLE1-220ENST00000640840 ZNF22P17026 224 aaPredicted RBP4.26□□□□□ -1.73
PRICKLE1-220ENST00000640840 PSMG4Q5JS54 123 aa4.26□□□□□ -1.73
PRICKLE1-220ENST00000640840 RNF182Q8N6D2 247 aa4.26□□□□□ -1.73
PRICKLE1-220ENST00000640840 B9D2Q9BPU9 175 aa4.26□□□□□ -1.73
PRICKLE1-220ENST00000640840 TRAV2A0A0B4J234 112 aa4.26□□□□□ -1.73
PRICKLE1-220ENST00000640840 C11orf86A6NJI1 115 aa4.26□□□□□ -1.73
PRICKLE1-220ENST00000640840 J3KT08 172 aa4.26□□□□□ -1.73
PRICKLE1-220ENST00000640840 TMEM61Q8N0U2 210 aa4.26□□□□□ -1.73
PRICKLE1-220ENST00000640840 STARD9Q9P2P6 4700 aa4.26□□□□□ -1.73
PRICKLE1-220ENST00000640840 RPL35AP18077 110 aaKnown RBP4.25□□□□□ -1.73
PRICKLE1-220ENST00000640840 ASIPP42127 132 aa4.25□□□□□ -1.73
PRICKLE1-220ENST00000640840 IL17DQ8TAD2 202 aa4.25□□□□□ -1.73
PRICKLE1-220ENST00000640840 MRPL53Q96EL3 112 aaKnown RBP4.25□□□□□ -1.73
PRICKLE1-220ENST00000640840 LINC00477Q96M19 166 aa4.25□□□□□ -1.73
PRICKLE1-220ENST00000640840 PRO1854Q9UHT4 67 aa4.25□□□□□ -1.73
PRICKLE1-220ENST00000640840 IGHV3-64A0A075B6Q5 118 aa4.25□□□□□ -1.73
PRICKLE1-220ENST00000640840 IGHV3OR16-13A0A075B7E8 117 aa4.25□□□□□ -1.73
PRICKLE1-220ENST00000640840 IGHV3-74A0A0B4J1X5 117 aa4.25□□□□□ -1.73
PRICKLE1-220ENST00000640840 IGHV3-66A0A0C4DH42 116 aa4.25□□□□□ -1.73
PRICKLE1-220ENST00000640840 OR10J6PQ8NGY7 276 aa4.25□□□□□ -1.73
PRICKLE1-220ENST00000640840 SMAD5-AS1Q9Y6J3 95 aa4.25□□□□□ -1.73
PRICKLE1-220ENST00000640840 TGP01266 2768 aa4.25□□□□□ -1.73
PRICKLE1-220ENST00000640840 TRGV11A0A075B6L2 103 aa4.25□□□□□ -1.73
PRICKLE1-220ENST00000640840 SPANXCQ9NY87 97 aa4.25□□□□□ -1.73
PRICKLE1-220ENST00000640840 FAM236AA0A1B0GUQ0 79 aa4.24□□□□□ -1.73
PRICKLE1-220ENST00000640840 FAM236BA0A1B0GV22 79 aa4.24□□□□□ -1.73
PRICKLE1-220ENST00000640840 BUB3O43684 328 aa4.24□□□□□ -1.73
PRICKLE1-220ENST00000640840 DUSP14O95147 198 aaKnown RBP4.24□□□□□ -1.73
PRICKLE1-220ENST00000640840 IGHV3-33P01772 117 aa4.24□□□□□ -1.73
PRICKLE1-220ENST00000640840 C20orf173Q96LM9 149 aa4.24□□□□□ -1.73
PRICKLE1-220ENST00000640840 CNFNQ9BYD5 112 aa4.24□□□□□ -1.73
PRICKLE1-220ENST00000640840 Q6Q795 121 aa4.24□□□□□ -1.73
PRICKLE1-220ENST00000640840 C2orf66Q6UXQ4 117 aa4.24□□□□□ -1.73
PRICKLE1-220ENST00000640840 DCANP1Q8TF63 244 aa4.24□□□□□ -1.73
PRICKLE1-220ENST00000640840 RHPN1-AS1Q9BWJ2 59 aa4.24□□□□□ -1.73
PRICKLE1-220ENST00000640840 TRAV12-1A0A0B4J245 112 aa4.24□□□□□ -1.73
PRICKLE1-220ENST00000640840 SOCS3O14543 225 aa4.24□□□□□ -1.73
PRICKLE1-220ENST00000640840 TSHBP01222 138 aa4.24□□□□□ -1.73
PRICKLE1-220ENST00000640840 Q1RN00 199 aa4.24□□□□□ -1.73
PRICKLE1-220ENST00000640840 SMIM2Q9BVW6 85 aa4.24□□□□□ -1.73
PRICKLE1-220ENST00000640840 EDA2RQ9HAV5 297 aa4.24□□□□□ -1.73
PRICKLE1-220ENST00000640840 IGLV4-69A0A075B6H9 119 aa4.23□□□□□ -1.73
PRICKLE1-220ENST00000640840 IGHV4-30-4P0DP06 118 aa4.23□□□□□ -1.73
PRICKLE1-220ENST00000640840 RPL39P62891 51 aaKnown RBP4.23□□□□□ -1.73
PRICKLE1-220ENST00000640840 ODF3L2Q3SX64 289 aa4.23□□□□□ -1.73
PRICKLE1-220ENST00000640840 LYPD1Q8N2G4 141 aa4.23□□□□□ -1.73
PRICKLE1-220ENST00000640840 TM2D3Q9BRN9 247 aa4.23□□□□□ -1.73
PRICKLE1-220ENST00000640840 CYSTM1Q9H1C7 97 aa4.23□□□□□ -1.73
PRICKLE1-220ENST00000640840 RETNQ9HD89 108 aa4.23□□□□□ -1.73
PRICKLE1-220ENST00000640840 RBAKDNA6NC62 111 aa4.23□□□□□ -1.73
PRICKLE1-220ENST00000640840 RBMY1BA6NDE4 496 aaKnown RBP4.23□□□□□ -1.73
PRICKLE1-220ENST00000640840 RBMY1EA6NEQ0 496 aaKnown RBP4.23□□□□□ -1.73
PRICKLE1-220ENST00000640840 RBMY1DP0C7P1 496 aaKnown RBP4.23□□□□□ -1.73
PRICKLE1-220ENST00000640840 TMEM170BQ5T4T1 132 aa4.23□□□□□ -1.73
PRICKLE1-220ENST00000640840 LYRM7Q5U5X0 104 aa4.23□□□□□ -1.73
PRICKLE1-220ENST00000640840 TOMM6Q96B49 74 aa4.23□□□□□ -1.73
PRICKLE1-220ENST00000640840 IGHV3-49A0A0A0MS15 119 aa4.23□□□□□ -1.73
PRICKLE1-220ENST00000640840 M0R381 172 aa4.23□□□□□ -1.73
PRICKLE1-220ENST00000640840 SPANXN1Q5VSR9 72 aa4.23□□□□□ -1.73
PRICKLE1-220ENST00000640840 MUSTN1Q8IVN3 82 aa4.23□□□□□ -1.73
PRICKLE1-220ENST00000640840 SLC25A29Q8N8R3 303 aa4.23□□□□□ -1.73
PRICKLE1-220ENST00000640840 TMEM263Q8WUH6 116 aaKnown RBP4.23□□□□□ -1.73
PRICKLE1-220ENST00000640840 CLEC2BQ92478 149 aa4.23□□□□□ -1.73
PRICKLE1-220ENST00000640840 AMELXQ99217 191 aa4.23□□□□□ -1.73
PRICKLE1-220ENST00000640840 OPRPNQ99935 248 aaPredicted RBP4.23□□□□□ -1.73
PRICKLE1-220ENST00000640840 H3BMM0 161 aa4.22□□□□□ -1.73
PRICKLE1-220ENST00000640840 K7EQG2 157 aa4.22□□□□□ -1.73
PRICKLE1-220ENST00000640840 TRIAP1O43715 76 aa4.22□□□□□ -1.73
PRICKLE1-220ENST00000640840 NPC2P61916 151 aa4.22□□□□□ -1.73
PRICKLE1-220ENST00000640840 HERVK_113P63121 156 aa4.22□□□□□ -1.73
PRICKLE1-220ENST00000640840 DYNLRB2Q8TF09 96 aa4.22□□□□□ -1.73
PRICKLE1-220ENST00000640840 UBE2WQ96B02 151 aa4.22□□□□□ -1.73
PRICKLE1-220ENST00000640840 H7C423 109 aa4.22□□□□□ -1.73
PRICKLE1-220ENST00000640840 DEFB1P60022 68 aa4.22□□□□□ -1.73
PRICKLE1-220ENST00000640840 PMVKQ15126 192 aa4.22□□□□□ -1.73
PRICKLE1-220ENST00000640840 C9orf153Q5TBE3 101 aa4.22□□□□□ -1.73
PRICKLE1-220ENST00000640840 C2orf82Q6UX34 121 aa4.22□□□□□ -1.73
PRICKLE1-220ENST00000640840 METTL26Q96S19 204 aa4.22□□□□□ -1.73
PRICKLE1-220ENST00000640840 TENM3Q9P273 2699 aa4.22□□□□□ -1.73
PRICKLE1-220ENST00000640840 HERVK_113P61574 105 aa4.22□□□□□ -1.73
PRICKLE1-220ENST00000640840 SUMO2P61956 95 aaKnown RBP4.22□□□□□ -1.73
PRICKLE1-220ENST00000640840 CD164L2Q6UWJ8 174 aa4.22□□□□□ -1.73
PRICKLE1-220ENST00000640840 WFDC10AQ9H1F0 79 aa4.22□□□□□ -1.73
PRICKLE1-220ENST00000640840 PRR9Q5T870 116 aa4.21□□□□□ -1.73
PRICKLE1-220ENST00000640840 COX8CQ7Z4L0 72 aa4.21□□□□□ -1.73
PRICKLE1-220ENST00000640840 POM121L12Q8N7R1 296 aa4.21□□□□□ -1.73
PRICKLE1-220ENST00000640840 AGPAT4-IT1Q9H0P7 198 aa4.21□□□□□ -1.73
PRICKLE1-220ENST00000640840 TRBV10-2A0A0K0K1G8 114 aa4.21□□□□□ -1.74
PRICKLE1-220ENST00000640840 A8MTW9 85 aa4.21□□□□□ -1.74
PRICKLE1-220ENST00000640840 MGPP08493 103 aa4.21□□□□□ -1.74
PRICKLE1-220ENST00000640840 SMCR5Q8TEV8 140 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms