RNA–Protein interactions for RNA: ENST00000640076.1

SCARB2-220, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 1,991 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-220ENST00000640076 TRAPPC1Q9Y5R8 145 aa5.62□□□□□ -1.51
SCARB2-220ENST00000640076 APCSP02743 223 aa5.62□□□□□ -1.51
SCARB2-220ENST00000640076 TRGC2P03986 189 aa5.62□□□□□ -1.51
SCARB2-220ENST00000640076 LINC00315P59091 139 aa5.62□□□□□ -1.51
SCARB2-220ENST00000640076 CFAP126Q5VTH2 177 aa5.62□□□□□ -1.51
SCARB2-220ENST00000640076 POM121L12Q8N7R1 296 aa5.62□□□□□ -1.51
SCARB2-220ENST00000640076 FRZBQ92765 325 aa5.62□□□□□ -1.51
SCARB2-220ENST00000640076 RNF185Q96GF1 192 aa5.62□□□□□ -1.51
SCARB2-220ENST00000640076 C11orf68Q9H3H3 251 aaKnown RBP5.62□□□□□ -1.51
SCARB2-220ENST00000640076 FBN3Q75N90 2809 aa5.61□□□□□ -1.51
SCARB2-220ENST00000640076 TRGV2A0A075B6R0 118 aa5.61□□□□□ -1.51
SCARB2-220ENST00000640076 PHOX2AO14813 284 aa5.61□□□□□ -1.51
SCARB2-220ENST00000640076 FAM74A4Q5TZK3 123 aa5.61□□□□□ -1.51
SCARB2-220ENST00000640076 UFSP1Q6NVU6 142 aa5.61□□□□□ -1.51
SCARB2-220ENST00000640076 HRCT1Q6UXD1 115 aa5.61□□□□□ -1.51
SCARB2-220ENST00000640076 PLEKHB2Q96CS7 222 aa5.61□□□□□ -1.51
SCARB2-220ENST00000640076 CELA1Q9UNI1 258 aa5.61□□□□□ -1.51
SCARB2-220ENST00000640076 SPART-AS1P0CW21 52 aa5.6□□□□□ -1.51
SCARB2-220ENST00000640076 DEFB130BP0DP73 79 aa5.6□□□□□ -1.51
SCARB2-220ENST00000640076 DEFB130AP0DP74 79 aa5.6□□□□□ -1.51
SCARB2-220ENST00000640076 KIAA1644Q3SXP7 199 aa5.6□□□□□ -1.51
SCARB2-220ENST00000640076 MRPL51Q4U2R6 128 aaKnown RBP5.6□□□□□ -1.51
SCARB2-220ENST00000640076 C18orf15Q96N68 181 aa5.6□□□□□ -1.51
SCARB2-220ENST00000640076 TRAV4A0A0B4J268 109 aa5.6□□□□□ -1.51
SCARB2-220ENST00000640076 A0A0J9YWU9 116 aa5.6□□□□□ -1.51
SCARB2-220ENST00000640076 A6NDN8 102 aa5.6□□□□□ -1.51
SCARB2-220ENST00000640076 K7EQD1 137 aa5.6□□□□□ -1.51
SCARB2-220ENST00000640076 ATP5G1P05496 136 aa5.6□□□□□ -1.51
SCARB2-220ENST00000640076 MGPP08493 103 aa5.6□□□□□ -1.51
SCARB2-220ENST00000640076 JOSD1Q15040 202 aaPredicted RBP5.6□□□□□ -1.51
SCARB2-220ENST00000640076 ZFP2Q6ZN57 461 aa5.6□□□□□ -1.51
SCARB2-220ENST00000640076 GTF2H5Q6ZYL4 71 aa5.6□□□□□ -1.51
SCARB2-220ENST00000640076 IGHV3-73A0A0B4J1V6 119 aa5.59□□□□□ -1.51
SCARB2-220ENST00000640076 TRAV26-2A0A0B4J265 109 aa5.59□□□□□ -1.51
SCARB2-220ENST00000640076 TEX48A0A1B0GUV7 120 aa5.59□□□□□ -1.51
SCARB2-220ENST00000640076 E9PLD3 99 aa5.59□□□□□ -1.51
SCARB2-220ENST00000640076 IGHV3-53P01767 116 aa5.59□□□□□ -1.51
SCARB2-220ENST00000640076 ZNF56Q15929 161 aa5.59□□□□□ -1.51
SCARB2-220ENST00000640076 TMEM70Q9BUB7 260 aa5.59□□□□□ -1.51
SCARB2-220ENST00000640076 U3KQK5 164 aa5.59□□□□□ -1.51
SCARB2-220ENST00000640076 D6R8Y8 96 aa5.58□□□□□ -1.52
SCARB2-220ENST00000640076 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.58□□□□□ -1.52
SCARB2-220ENST00000640076 GAS8-AS1O95177 125 aa5.58□□□□□ -1.52
SCARB2-220ENST00000640076 NCR2O95944 276 aa5.58□□□□□ -1.52
SCARB2-220ENST00000640076 CKS2P33552 79 aa5.58□□□□□ -1.52
SCARB2-220ENST00000640076 DAD1P61803 113 aa5.58□□□□□ -1.52
SCARB2-220ENST00000640076 ORMDL3Q8N138 153 aa5.58□□□□□ -1.52
SCARB2-220ENST00000640076 PRADC1Q9BSG0 188 aa5.58□□□□□ -1.52
SCARB2-220ENST00000640076 PFN2P35080 140 aa5.58□□□□□ -1.52
SCARB2-220ENST00000640076 BATFQ16520 125 aa5.58□□□□□ -1.52
SCARB2-220ENST00000640076 Q6ZN92 141 aa5.58□□□□□ -1.52
SCARB2-220ENST00000640076 KRTAP3-1Q9BYR8 98 aa5.58□□□□□ -1.52
SCARB2-220ENST00000640076 M0QY20 66 aa5.57□□□□□ -1.52
SCARB2-220ENST00000640076 HIST1H2BKO60814 126 aa5.57□□□□□ -1.52
SCARB2-220ENST00000640076 HIST1H2BJP06899 126 aa5.57□□□□□ -1.52
SCARB2-220ENST00000640076 PRSS1P07477 247 aa5.57□□□□□ -1.52
SCARB2-220ENST00000640076 HIST1H2BOP23527 126 aa5.57□□□□□ -1.52
SCARB2-220ENST00000640076 HIST1H2BBP33778 126 aa5.57□□□□□ -1.52
SCARB2-220ENST00000640076 HIST1H2BDP58876 126 aa5.57□□□□□ -1.52
SCARB2-220ENST00000640076 HIST1H2BCP62807 126 aa5.57□□□□□ -1.52
SCARB2-220ENST00000640076 HIST2H2BEQ16778 126 aa5.57□□□□□ -1.52
SCARB2-220ENST00000640076 C12orf74Q32Q52 190 aa5.57□□□□□ -1.52
SCARB2-220ENST00000640076 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.57□□□□□ -1.52
SCARB2-220ENST00000640076 HIST1H2BHQ93079 126 aa5.57□□□□□ -1.52
SCARB2-220ENST00000640076 PRELID3AQ96N28 172 aa5.57□□□□□ -1.52
SCARB2-220ENST00000640076 HIST1H2BNQ99877 126 aa5.57□□□□□ -1.52
SCARB2-220ENST00000640076 HIST1H2BMQ99879 126 aa5.57□□□□□ -1.52
SCARB2-220ENST00000640076 IGHV3-38A0A0C4DH36 116 aa5.56□□□□□ -1.52
SCARB2-220ENST00000640076 C8orf87E5RJ46 101 aa5.56□□□□□ -1.52
SCARB2-220ENST00000640076 J3QR89 54 aa5.56□□□□□ -1.52
SCARB2-220ENST00000640076 HOXA5P20719 270 aa5.56□□□□□ -1.52
SCARB2-220ENST00000640076 FHL2Q14192 279 aa5.56□□□□□ -1.52
SCARB2-220ENST00000640076 NRACQ8N912 160 aa5.56□□□□□ -1.52
SCARB2-220ENST00000640076 RPL39LQ96EH5 51 aaKnown RBP5.56□□□□□ -1.52
SCARB2-220ENST00000640076 NAA38Q9BRA0 125 aaKnown RBP5.56□□□□□ -1.52
SCARB2-220ENST00000640076 EDA2RQ9HAV5 297 aa5.56□□□□□ -1.52
SCARB2-220ENST00000640076 TRGV4A0A0C4DH28 118 aa5.56□□□□□ -1.52
SCARB2-220ENST00000640076 LOC107984640A0A0U1RRK4 108 aa5.56□□□□□ -1.52
SCARB2-220ENST00000640076 NPYP01303 97 aa5.56□□□□□ -1.52
SCARB2-220ENST00000640076 P0DMU3 169 aa5.56□□□□□ -1.52
SCARB2-220ENST00000640076 FAM231AP0DMU4 169 aa5.56□□□□□ -1.52
SCARB2-220ENST00000640076 FAM231CP0DMU5 169 aa5.56□□□□□ -1.52
SCARB2-220ENST00000640076 LINC00694P0DN24 101 aa5.56□□□□□ -1.52
SCARB2-220ENST00000640076 HSD52Q0P140 79 aa5.56□□□□□ -1.52
SCARB2-220ENST00000640076 ANKRD29Q8N6D5 301 aa5.56□□□□□ -1.52
SCARB2-220ENST00000640076 SLC25A29Q8N8R3 303 aa5.56□□□□□ -1.52
SCARB2-220ENST00000640076 COX11Q9Y6N1 276 aa5.56□□□□□ -1.52
SCARB2-220ENST00000640076 TRBV6-4A0A1B0GX49 114 aa5.55□□□□□ -1.52
SCARB2-220ENST00000640076 PPP1R17O96001 155 aa5.55□□□□□ -1.52
SCARB2-220ENST00000640076 TTC32Q5I0X7 151 aa5.55□□□□□ -1.52
SCARB2-220ENST00000640076 Q6ZTC4 211 aa5.55□□□□□ -1.52
SCARB2-220ENST00000640076 NFE4Q86UQ8 179 aa5.55□□□□□ -1.52
SCARB2-220ENST00000640076 C18orf32Q8TCD1 76 aa5.55□□□□□ -1.52
SCARB2-220ENST00000640076 TGP01266 2768 aa5.55□□□□□ -1.52
SCARB2-220ENST00000640076 TRBV6-5A0A0K0K1A5 114 aa5.55□□□□□ -1.52
SCARB2-220ENST00000640076 NANOS2P60321 138 aaKnown RBP5.55□□□□□ -1.52
SCARB2-220ENST00000640076 HHLA3Q9XRX5 114 aa5.55□□□□□ -1.52
SCARB2-220ENST00000640076 TRBV10-1A0A0K0K1A3 114 aa5.54□□□□□ -1.52
SCARB2-220ENST00000640076 HTN3P15516 51 aa5.54□□□□□ -1.52
SCARB2-220ENST00000640076 Q0VG73 95 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms