RNA–Protein interactions for RNA: ENST00000638889.1

CCDC7-211, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-211ENST00000638889 TMEM263Q8WUH6 116 aaKnown RBP-0.35□□□□□ -2.47
CCDC7-211ENST00000638889 BORCS7Q96B45 105 aa-0.35□□□□□ -2.47
CCDC7-211ENST00000638889 BTF3L4Q96K17 158 aa-0.35□□□□□ -2.47
CCDC7-211ENST00000638889 FAM167A-AS1Q96KT0 104 aa-0.35□□□□□ -2.47
CCDC7-211ENST00000638889 MCEEQ96PE7 176 aa-0.35□□□□□ -2.47
CCDC7-211ENST00000638889 PPP1R2P1Q96PQ5 205 aa-0.35□□□□□ -2.47
CCDC7-211ENST00000638889 MGST2Q99735 147 aa-0.35□□□□□ -2.47
CCDC7-211ENST00000638889 C20orf27Q9GZN8 174 aa-0.35□□□□□ -2.47
CCDC7-211ENST00000638889 NMNAT1Q9HAN9 279 aaPredicted RBP-0.35□□□□□ -2.47
CCDC7-211ENST00000638889 GLTPQ9NZD2 209 aa-0.35□□□□□ -2.47
CCDC7-211ENST00000638889 PKIGQ9Y2B9 76 aa-0.35□□□□□ -2.47
CCDC7-211ENST00000638889 NOP16Q9Y3C1 178 aaKnown RBP-0.35□□□□□ -2.47
CCDC7-211ENST00000638889 LSM5Q9Y4Y9 91 aaKnown RBP-0.35□□□□□ -2.47
CCDC7-211ENST00000638889 LINC00312Q9Y6C7 94 aa-0.35□□□□□ -2.47
CCDC7-211ENST00000638889 ZNF142P52746 1687 aaPredicted RBP-0.35□□□□□ -2.47
CCDC7-211ENST00000638889 CTTNBP2Q8WZ74 1663 aa-0.35□□□□□ -2.47
CCDC7-211ENST00000638889 MYH7BA7E2Y1 1941 aa-0.35□□□□□ -2.47
CCDC7-211ENST00000638889 MED23Q9ULK4 1368 aa-0.35□□□□□ -2.47
CCDC7-211ENST00000638889 NKTRP30414 1462 aaKnown RBP-0.35□□□□□ -2.47
CCDC7-211ENST00000638889 ATP7BP35670 1465 aa-0.35□□□□□ -2.47
CCDC7-211ENST00000638889 PXDNQ92626 1479 aa-0.35□□□□□ -2.47
CCDC7-211ENST00000638889 CEP164Q9UPV0 1460 aa-0.35□□□□□ -2.47
CCDC7-211ENST00000638889 DNAH14Q0VDD8 3507 aa-0.35□□□□□ -2.47
CCDC7-211ENST00000638889 CDC42BPAQ5VT25 1732 aa-0.35□□□□□ -2.47
CCDC7-211ENST00000638889 RREB1Q92766 1687 aa-0.36□□□□□ -2.47
CCDC7-211ENST00000638889 DISP2A7MBM2 1401 aa-0.36□□□□□ -2.47
CCDC7-211ENST00000638889 PRG4Q92954 1404 aaPredicted RBP-0.36□□□□□ -2.47
CCDC7-211ENST00000638889 ADGRL3Q9HAR2 1447 aa-0.36□□□□□ -2.47
CCDC7-211ENST00000638889 KIAA1107Q9UPP5 1409 aa-0.36□□□□□ -2.47
CCDC7-211ENST00000638889 NCOA3Q9Y6Q9 1424 aa-0.36□□□□□ -2.47
CCDC7-211ENST00000638889 CUX1P39880 1505 aa-0.36□□□□□ -2.47
CCDC7-211ENST00000638889 PRDM15P57071 1507 aaPredicted RBP-0.36□□□□□ -2.47
CCDC7-211ENST00000638889 TULP4Q9NRJ4 1543 aa-0.36□□□□□ -2.47
CCDC7-211ENST00000638889 ARHGEF12Q9NZN5 1544 aa-0.36□□□□□ -2.47
CCDC7-211ENST00000638889 TRBV19A0A075B6N1 114 aa-0.36□□□□□ -2.47
CCDC7-211ENST00000638889 TRAV13-1A0A0B4J241 112 aa-0.36□□□□□ -2.47
CCDC7-211ENST00000638889 FAM236DA0A1B0GTK5 79 aa-0.36□□□□□ -2.47
CCDC7-211ENST00000638889 LOC100130705A0A1B0GUX0 176 aa-0.36□□□□□ -2.47
CCDC7-211ENST00000638889 LOC285095A0A1B0GVY8 99 aa-0.36□□□□□ -2.47
CCDC7-211ENST00000638889 IGLC7A0M8Q6 106 aa-0.36□□□□□ -2.47
CCDC7-211ENST00000638889 J3QLW9 94 aa-0.36□□□□□ -2.47
CCDC7-211ENST00000638889 M0QZ92 97 aa-0.36□□□□□ -2.47
CCDC7-211ENST00000638889 HMGB3O15347 200 aaKnown RBP-0.36□□□□□ -2.47
CCDC7-211ENST00000638889 NDUFC2O95298 119 aa-0.36□□□□□ -2.47
CCDC7-211ENST00000638889 SFT2D2O95562 160 aa-0.36□□□□□ -2.47
CCDC7-211ENST00000638889 HBDP02042 147 aa-0.36□□□□□ -2.47
CCDC7-211ENST00000638889 APOA2P02652 100 aa-0.36□□□□□ -2.47
CCDC7-211ENST00000638889 TRGC2P03986 189 aa-0.36□□□□□ -2.47
CCDC7-211ENST00000638889 S100A6P06703 90 aa-0.36□□□□□ -2.47
CCDC7-211ENST00000638889 ACYP1P07311 99 aa-0.36□□□□□ -2.47
CCDC7-211ENST00000638889 IFI6P09912 130 aa-0.36□□□□□ -2.47
CCDC7-211ENST00000638889 IGLC1P0CG04 106 aa-0.36□□□□□ -2.47
CCDC7-211ENST00000638889 FAM236CP0DP71 79 aa-0.36□□□□□ -2.47
CCDC7-211ENST00000638889 DEFB130BP0DP73 79 aa-0.36□□□□□ -2.47
CCDC7-211ENST00000638889 DEFB130AP0DP74 79 aa-0.36□□□□□ -2.47
CCDC7-211ENST00000638889 HIST1H1BP16401 226 aaKnown RBP-0.36□□□□□ -2.47
CCDC7-211ENST00000638889 OGNP20774 298 aaKnown RBP-0.36□□□□□ -2.47
CCDC7-211ENST00000638889 COX7BP24311 80 aa-0.36□□□□□ -2.47
CCDC7-211ENST00000638889 PPP1R2P41236 205 aa-0.36□□□□□ -2.47
CCDC7-211ENST00000638889 SRP9P49458 86 aaKnown RBP-0.36□□□□□ -2.47
CCDC7-211ENST00000638889 TCL1AP56279 114 aa-0.36□□□□□ -2.47
CCDC7-211ENST00000638889 LINC00158P58513 81 aa-0.36□□□□□ -2.47
CCDC7-211ENST00000638889 SPCS3P61009 180 aa-0.36□□□□□ -2.47
CCDC7-211ENST00000638889 UBE2G1P62253 170 aa-0.36□□□□□ -2.47
CCDC7-211ENST00000638889 RPL38P63173 70 aaKnown RBP-0.36□□□□□ -2.47
CCDC7-211ENST00000638889 SKP1P63208 163 aa-0.36□□□□□ -2.47
CCDC7-211ENST00000638889 GNGT1P63211 74 aa-0.36□□□□□ -2.47
CCDC7-211ENST00000638889 MRPS15P82914 257 aaKnown RBP-0.36□□□□□ -2.47
CCDC7-211ENST00000638889 PLGLB1Q02325 96 aa-0.36□□□□□ -2.47
CCDC7-211ENST00000638889 WHAMMP3Q1A5X7 153 aa-0.36□□□□□ -2.47
CCDC7-211ENST00000638889 SCGB2B2Q4G0G5 96 aa-0.36□□□□□ -2.47
CCDC7-211ENST00000638889 TMEM128Q5BJH2 165 aa-0.36□□□□□ -2.47
CCDC7-211ENST00000638889 C10orf128Q5T292 105 aa-0.36□□□□□ -2.47
CCDC7-211ENST00000638889 C9orf153Q5TBE3 101 aa-0.36□□□□□ -2.47
CCDC7-211ENST00000638889 SPANXN1Q5VSR9 72 aa-0.36□□□□□ -2.47
CCDC7-211ENST00000638889 PPP1R2P3Q6NXS1 205 aa-0.36□□□□□ -2.47
CCDC7-211ENST00000638889 COX6B2Q6YFQ2 88 aa-0.36□□□□□ -2.47
CCDC7-211ENST00000638889 C6orf201Q7Z4U5 140 aa-0.36□□□□□ -2.47
CCDC7-211ENST00000638889 C5orf38Q86SI9 138 aa-0.36□□□□□ -2.47
CCDC7-211ENST00000638889 TAC4Q86UU9 113 aa-0.36□□□□□ -2.47
CCDC7-211ENST00000638889 CTAGE3PQ8IX95 158 aa-0.36□□□□□ -2.47
CCDC7-211ENST00000638889 MMGT1Q8N4V1 131 aa-0.36□□□□□ -2.47
CCDC7-211ENST00000638889 OTUD6BQ8N6M0 293 aa-0.36□□□□□ -2.47
CCDC7-211ENST00000638889 ATP6V0E2Q8NHE4 81 aa-0.36□□□□□ -2.47
CCDC7-211ENST00000638889 LCN9Q8WX39 176 aa-0.36□□□□□ -2.47
CCDC7-211ENST00000638889 LEAP2Q969E1 77 aa-0.36□□□□□ -2.47
CCDC7-211ENST00000638889 SLC35B4Q969S0 331 aa-0.36□□□□□ -2.47
CCDC7-211ENST00000638889 AQP10Q96PS8 301 aa-0.36□□□□□ -2.47
CCDC7-211ENST00000638889 TRGV9Q99603 122 aa-0.36□□□□□ -2.47
CCDC7-211ENST00000638889 SNRNP25Q9BV90 132 aaKnown RBP-0.36□□□□□ -2.47
CCDC7-211ENST00000638889 TTTY10Q9BZA0 68 aa-0.36□□□□□ -2.47
CCDC7-211ENST00000638889 DYNLRB1Q9NP97 96 aa-0.36□□□□□ -2.47
CCDC7-211ENST00000638889 NOP10Q9NPE3 64 aaKnown RBP-0.36□□□□□ -2.47
CCDC7-211ENST00000638889 FGFR1OP2Q9NVK5 253 aa-0.36□□□□□ -2.47
CCDC7-211ENST00000638889 IL20Q9NYY1 176 aa-0.36□□□□□ -2.47
CCDC7-211ENST00000638889 LENEPQ9Y5L5 61 aa-0.36□□□□□ -2.47
CCDC7-211ENST00000638889 SERP1Q9Y6X1 66 aa-0.36□□□□□ -2.47
CCDC7-211ENST00000638889 LINC01558Q9Y6Z2 57 aa-0.36□□□□□ -2.47
CCDC7-211ENST00000638889 DOCK5Q9H7D0 1870 aa-0.36□□□□□ -2.47
CCDC7-211ENST00000638889 KIAA0556O60303 1618 aa-0.36□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms