RNA–Protein interactions for RNA: ENST00000637223.1

CLN6-218, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-218ENST00000637223 NXT2Q9NPJ8 142 aaKnown RBP11.53□□□□□ -0.56
CLN6-218ENST00000637223 ABCA13Q86UQ4 5058 aa11.52□□□□□ -0.57
CLN6-218ENST00000637223 TRAV8-3A0A0A6YYJ7 113 aa11.52□□□□□ -0.57
CLN6-218ENST00000637223 TCAPO15273 167 aa11.52□□□□□ -0.57
CLN6-218ENST00000637223 SERF1AO75920 110 aa11.52□□□□□ -0.57
CLN6-218ENST00000637223 LINC00614P0C842 121 aa11.52□□□□□ -0.57
CLN6-218ENST00000637223 FGF6P10767 208 aa11.52□□□□□ -0.57
CLN6-218ENST00000637223 S100A2P29034 98 aa11.52□□□□□ -0.57
CLN6-218ENST00000637223 TNP2Q05952 138 aa11.52□□□□□ -0.57
CLN6-218ENST00000637223 AMMECR1LQ6DCA0 310 aa11.52□□□□□ -0.57
CLN6-218ENST00000637223 RNASEKQ6P5S7 137 aaKnown RBP11.52□□□□□ -0.57
CLN6-218ENST00000637223 CLPSL2Q6UWE3 100 aa11.52□□□□□ -0.57
CLN6-218ENST00000637223 C20orf203Q8NBC4 194 aa11.52□□□□□ -0.57
CLN6-218ENST00000637223 TMEM18Q96B42 140 aa11.52□□□□□ -0.57
CLN6-218ENST00000637223 A0A1B0GUV1 79 aa11.51□□□□□ -0.57
CLN6-218ENST00000637223 LINC01546A6NGU7 62 aa11.51□□□□□ -0.57
CLN6-218ENST00000637223 H7C423 109 aa11.51□□□□□ -0.57
CLN6-218ENST00000637223 CRPP02741 224 aa11.51□□□□□ -0.57
CLN6-218ENST00000637223 ENHOQ6UWT2 76 aa11.51□□□□□ -0.57
CLN6-218ENST00000637223 LINC00269Q8N2A0 174 aa11.51□□□□□ -0.57
CLN6-218ENST00000637223 PRSS3P2Q8NHM4 247 aa11.5□□□□□ -0.57
CLN6-218ENST00000637223 KRTAP4-5Q9BYR2 181 aa11.5□□□□□ -0.57
CLN6-218ENST00000637223 LINC00310P59036 64 aa11.49□□□□□ -0.57
CLN6-218ENST00000637223 Q8N8P6 123 aa11.49□□□□□ -0.57
CLN6-218ENST00000637223 AP5S1Q9NUS5 200 aa11.49□□□□□ -0.57
CLN6-218ENST00000637223 IGKV2D-24A0A075B6R9 120 aa11.48□□□□□ -0.57
CLN6-218ENST00000637223 PSCAO43653 123 aa11.48□□□□□ -0.57
CLN6-218ENST00000637223 HSBP1O75506 76 aa11.48□□□□□ -0.57
CLN6-218ENST00000637223 FA2HQ7L5A8 372 aa11.48□□□□□ -0.57
CLN6-218ENST00000637223 PRR34Q9NV39 138 aa11.48□□□□□ -0.57
CLN6-218ENST00000637223 ZNF25P17030 456 aaPredicted RBP11.47□□□□□ -0.57
CLN6-218ENST00000637223 IFI27P40305 119 aaPredicted RBP11.47□□□□□ -0.57
CLN6-218ENST00000637223 REG3AQ06141 175 aa11.47□□□□□ -0.57
CLN6-218ENST00000637223 RMI2Q96E14 147 aa11.47□□□□□ -0.57
CLN6-218ENST00000637223 TMEM101Q96IK0 257 aa11.47□□□□□ -0.57
CLN6-218ENST00000637223 HIST1H2BLQ99880 126 aa11.47□□□□□ -0.57
CLN6-218ENST00000637223 TM2D2Q9BX73 214 aa11.47□□□□□ -0.57
CLN6-218ENST00000637223 IGKV3OR2-268A0A0C4DH90 116 aa11.46□□□□□ -0.57
CLN6-218ENST00000637223 RPL39P62891 51 aaKnown RBP11.46□□□□□ -0.57
CLN6-218ENST00000637223 MRPL52Q86TS9 123 aaKnown RBP11.46□□□□□ -0.57
CLN6-218ENST00000637223 OR5A1Q8NGJ0 315 aa11.46□□□□□ -0.57
CLN6-218ENST00000637223 URB1-AS1Q96HZ7 61 aa11.46□□□□□ -0.57
CLN6-218ENST00000637223 LINC01549A6NIU2 74 aa11.45□□□□□ -0.58
CLN6-218ENST00000637223 IFITM10A6NMD0 228 aa11.45□□□□□ -0.58
CLN6-218ENST00000637223 NUPR1O60356 82 aa11.45□□□□□ -0.58
CLN6-218ENST00000637223 G0S2P27469 103 aa11.45□□□□□ -0.58
CLN6-218ENST00000637223 MIAQ16674 131 aa11.45□□□□□ -0.58
CLN6-218ENST00000637223 C1orf43Q9BWL3 253 aa11.45□□□□□ -0.58
CLN6-218ENST00000637223 UBE2D4Q9Y2X8 147 aa11.45□□□□□ -0.58
CLN6-218ENST00000637223 IGLV10-54A0A075B6I4 117 aa11.44□□□□□ -0.58
CLN6-218ENST00000637223 A0A1B0GVY2 172 aa11.44□□□□□ -0.58
CLN6-218ENST00000637223 DGAT2L7PQ6IED9 249 aa11.44□□□□□ -0.58
CLN6-218ENST00000637223 DNAH11Q96DT5 4516 aa11.43□□□□□ -0.58
CLN6-218ENST00000637223 FABP4P15090 132 aa11.43□□□□□ -0.58
CLN6-218ENST00000637223 SMAGPQ0VAQ4 97 aa11.43□□□□□ -0.58
CLN6-218ENST00000637223 COX11Q9Y6N1 276 aa11.43□□□□□ -0.58
CLN6-218ENST00000637223 A0A087WTM6 91 aa11.42□□□□□ -0.58
CLN6-218ENST00000637223 ORMDL2Q53FV1 153 aa11.42□□□□□ -0.58
CLN6-218ENST00000637223 PDZD11Q5EBL8 140 aa11.42□□□□□ -0.58
CLN6-218ENST00000637223 MAPKAPK5-AS1Q8N8E1 139 aa11.42□□□□□ -0.58
CLN6-218ENST00000637223 CDC42SE2Q9NRR3 84 aa11.42□□□□□ -0.58
CLN6-218ENST00000637223 RNASE13Q5GAN3 156 aaKnown RBP11.41□□□□□ -0.58
CLN6-218ENST00000637223 Q6ZUT4 128 aa11.41□□□□□ -0.58
CLN6-218ENST00000637223 ZNF664Q8N3J9 261 aa11.41□□□□□ -0.58
CLN6-218ENST00000637223 TIMM21Q9BVV7 248 aa11.41□□□□□ -0.58
CLN6-218ENST00000637223 LRCOL1A6NCL2 159 aa11.4□□□□□ -0.58
CLN6-218ENST00000637223 LECT2O14960 151 aa11.4□□□□□ -0.58
CLN6-218ENST00000637223 WFDC2Q14508 124 aa11.4□□□□□ -0.58
CLN6-218ENST00000637223 BAALCQ8WXS3 180 aa11.4□□□□□ -0.58
CLN6-218ENST00000637223 SPANXA1Q9NS26 97 aa11.4□□□□□ -0.58
CLN6-218ENST00000637223 CSDC2Q9Y534 153 aaKnown RBP11.4□□□□□ -0.58
CLN6-218ENST00000637223 PKD1P98161 4303 aa11.4□□□□□ -0.58
CLN6-218ENST00000637223 TRAV8-4A0A0B4J246 113 aa11.39□□□□□ -0.59
CLN6-218ENST00000637223 EREGO14944 169 aa11.39□□□□□ -0.59
CLN6-218ENST00000637223 HBDP02042 147 aa11.39□□□□□ -0.59
CLN6-218ENST00000637223 C2orf66Q6UXQ4 117 aa11.39□□□□□ -0.59
CLN6-218ENST00000637223 OPRPNQ99935 248 aaPredicted RBP11.39□□□□□ -0.59
CLN6-218ENST00000637223 HSPB8Q9UJY1 196 aa11.39□□□□□ -0.59
CLN6-218ENST00000637223 CYSLTR1Q9Y271 337 aa11.39□□□□□ -0.59
CLN6-218ENST00000637223 AKR1D1P51857 326 aa11.38□□□□□ -0.59
CLN6-218ENST00000637223 KRTAP26-1Q6PEX3 210 aa11.38□□□□□ -0.59
CLN6-218ENST00000637223 SPATA12Q7Z6I5 190 aa11.38□□□□□ -0.59
CLN6-218ENST00000637223 OR10D4PQ8NGN7 298 aa11.38□□□□□ -0.59
CLN6-218ENST00000637223 LEPROTL1O95214 131 aa11.37□□□□□ -0.59
CLN6-218ENST00000637223 FAM19A2Q8N3H0 131 aa11.37□□□□□ -0.59
CLN6-218ENST00000637223 CHCHD10Q8WYQ3 142 aaPredicted RBP11.37□□□□□ -0.59
CLN6-218ENST00000637223 LINC00959A0A1B0GUT2 108 aa11.36□□□□□ -0.59
CLN6-218ENST00000637223 GAGE12HA6NDE8 117 aa11.36□□□□□ -0.59
CLN6-218ENST00000637223 SMIM6P0DI80 62 aa11.36□□□□□ -0.59
CLN6-218ENST00000637223 FUSP35637 526 aaKnown RBP eCLIP11.36□□□□□ -0.59
CLN6-218ENST00000637223 KRTAP10-2P60368 255 aa11.36□□□□□ -0.59
CLN6-218ENST00000637223 FAM104AQ969W3 186 aa11.36□□□□□ -0.59
CLN6-218ENST00000637223 PKHD1P08F94 4074 aa11.36□□□□□ -0.59
CLN6-218ENST00000637223 MRPS36P82909 103 aaKnown RBP11.35□□□□□ -0.59
CLN6-218ENST00000637223 PYGO1Q9Y3Y4 419 aa11.35□□□□□ -0.59
CLN6-218ENST00000637223 IGLV4-3A0A075B6K6 122 aa11.34□□□□□ -0.59
CLN6-218ENST00000637223 A0A096LNJ9 63 aa11.34□□□□□ -0.59
CLN6-218ENST00000637223 TRAV13-1A0A0B4J241 112 aa11.34□□□□□ -0.59
CLN6-218ENST00000637223 CCL25O15444 150 aa11.34□□□□□ -0.59
CLN6-218ENST00000637223 XCL1P47992 114 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms