RNA–Protein interactions for RNA: ENST00000636840.1

PNKP-226, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 117 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-226ENST00000636840 CSDC2Q9Y534 153 aaKnown RBP5.47□□□□□ -1.53
PNKP-226ENST00000636840 IGLV5-52A0A0A0MRZ9 124 aa5.46□□□□□ -1.54
PNKP-226ENST00000636840 CCL25O15444 150 aa5.46□□□□□ -1.54
PNKP-226ENST00000636840 ORMDL2Q53FV1 153 aa5.46□□□□□ -1.54
PNKP-226ENST00000636840 ZNF664Q8N3J9 261 aa5.46□□□□□ -1.54
PNKP-226ENST00000636840 Q8N814 137 aa5.46□□□□□ -1.54
PNKP-226ENST00000636840 Q8N8P6 123 aa5.46□□□□□ -1.54
PNKP-226ENST00000636840 PRSS3P2Q8NHM4 247 aa5.46□□□□□ -1.54
PNKP-226ENST00000636840 TIMM21Q9BVV7 248 aa5.46□□□□□ -1.54
PNKP-226ENST00000636840 CDC42SE2Q9NRR3 84 aa5.46□□□□□ -1.54
PNKP-226ENST00000636840 IGLV10-54A0A075B6I4 117 aa5.45□□□□□ -1.54
PNKP-226ENST00000636840 C1orf196B1AJZ1 125 aa5.45□□□□□ -1.54
PNKP-226ENST00000636840 GCSHP23434 173 aa5.45□□□□□ -1.54
PNKP-226ENST00000636840 KIAA1644Q3SXP7 199 aa5.45□□□□□ -1.54
PNKP-226ENST00000636840 MRPL18Q9H0U6 180 aaKnown RBP5.45□□□□□ -1.54
PNKP-226ENST00000636840 TRAPPC1Q9Y5R8 145 aa5.45□□□□□ -1.54
PNKP-226ENST00000636840 PKD1P98161 4303 aa5.45□□□□□ -1.54
PNKP-226ENST00000636840 DNAH11Q96DT5 4516 aa5.44□□□□□ -1.54
PNKP-226ENST00000636840 LINC01549A6NIU2 74 aa5.44□□□□□ -1.54
PNKP-226ENST00000636840 LECT2O14960 151 aa5.44□□□□□ -1.54
PNKP-226ENST00000636840 IFI27P40305 119 aaPredicted RBP5.44□□□□□ -1.54
PNKP-226ENST00000636840 KRTAP10-2P60368 255 aa5.44□□□□□ -1.54
PNKP-226ENST00000636840 SLC7A5P1Q8MH63 180 aa5.44□□□□□ -1.54
PNKP-226ENST00000636840 BIRC6Q9NR09 4857 aa5.44□□□□□ -1.54
PNKP-226ENST00000636840 SMCO4Q9NRQ5 59 aa5.44□□□□□ -1.54
PNKP-226ENST00000636840 SPANXA1Q9NS26 97 aa5.44□□□□□ -1.54
PNKP-226ENST00000636840 AP5S1Q9NUS5 200 aa5.44□□□□□ -1.54
PNKP-226ENST00000636840 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.43□□□□□ -1.54
PNKP-226ENST00000636840 LINC00959A0A1B0GUT2 108 aa5.43□□□□□ -1.54
PNKP-226ENST00000636840 GAGE12HA6NDE8 117 aa5.43□□□□□ -1.54
PNKP-226ENST00000636840 USP17L23D6RBM5 183 aa5.43□□□□□ -1.54
PNKP-226ENST00000636840 PAPPA-AS1Q5QFB9 102 aa5.43□□□□□ -1.54
PNKP-226ENST00000636840 MAPKAPK5-AS1Q8N8E1 139 aa5.43□□□□□ -1.54
PNKP-226ENST00000636840 CHCHD10Q8WYQ3 142 aaPredicted RBP5.43□□□□□ -1.54
PNKP-226ENST00000636840 CYSLTR1Q9Y271 337 aa5.43□□□□□ -1.54
PNKP-226ENST00000636840 UBE2D4Q9Y2X8 147 aa5.43□□□□□ -1.54
PNKP-226ENST00000636840 DYNC1H1Q14204 4646 aaKnown RBP5.43□□□□□ -1.54
PNKP-226ENST00000636840 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.42□□□□□ -1.54
PNKP-226ENST00000636840 TGIF2-C20orf24A0A0A6YYL0 155 aa5.42□□□□□ -1.54
PNKP-226ENST00000636840 RPL39P62891 51 aaKnown RBP5.42□□□□□ -1.54
PNKP-226ENST00000636840 MRPS36P82909 103 aaKnown RBP5.42□□□□□ -1.54
PNKP-226ENST00000636840 Q6ZN92 141 aa5.42□□□□□ -1.54
PNKP-226ENST00000636840 FA2HQ7L5A8 372 aa5.42□□□□□ -1.54
PNKP-226ENST00000636840 ALKBH7Q9BT30 221 aaPredicted RBP5.42□□□□□ -1.54
PNKP-226ENST00000636840 PYGO1Q9Y3Y4 419 aa5.42□□□□□ -1.54
PNKP-226ENST00000636840 HECTD4Q9Y4D8 3996 aa5.41□□□□□ -1.54
PNKP-226ENST00000636840 TRAV13-1A0A0B4J241 112 aa5.41□□□□□ -1.54
PNKP-226ENST00000636840 NPSP0C0P6 89 aa5.41□□□□□ -1.54
PNKP-226ENST00000636840 MALP21145 153 aa5.41□□□□□ -1.54
PNKP-226ENST00000636840 XCL1P47992 114 aa5.41□□□□□ -1.54
PNKP-226ENST00000636840 RAB5BP61020 215 aa5.41□□□□□ -1.54
PNKP-226ENST00000636840 KRTAP26-1Q6PEX3 210 aa5.41□□□□□ -1.54
PNKP-226ENST00000636840 CD164L2Q6UWJ8 174 aa5.41□□□□□ -1.54
PNKP-226ENST00000636840 C2orf66Q6UXQ4 117 aa5.41□□□□□ -1.54
PNKP-226ENST00000636840 VCX2Q9H322 139 aa5.41□□□□□ -1.54
PNKP-226ENST00000636840 hDV102S1A0JD36 115 aa5.4□□□□□ -1.54
PNKP-226ENST00000636840 IFITM10A6NMD0 228 aa5.4□□□□□ -1.54
PNKP-226ENST00000636840 CDK2AP2O75956 126 aa5.4□□□□□ -1.54
PNKP-226ENST00000636840 APOMO95445 188 aa5.4□□□□□ -1.54
PNKP-226ENST00000636840 WFDC2Q14508 124 aa5.4□□□□□ -1.54
PNKP-226ENST00000636840 TEX43Q6ZNM6 134 aa5.4□□□□□ -1.54
PNKP-226ENST00000636840 TMEM141Q96I45 108 aa5.4□□□□□ -1.54
PNKP-226ENST00000636840 C2orf88Q9BSF0 95 aa5.4□□□□□ -1.54
PNKP-226ENST00000636840 IGHV1-58A0A0C4DH39 117 aa5.39□□□□□ -1.55
PNKP-226ENST00000636840 ZNF561-AS1K7EIQ3 104 aa5.39□□□□□ -1.55
PNKP-226ENST00000636840 COX7A2LO14548 114 aa5.39□□□□□ -1.55
PNKP-226ENST00000636840 PRSS1P07477 247 aa5.39□□□□□ -1.55
PNKP-226ENST00000636840 FUSP35637 526 aaKnown RBP eCLIP5.39□□□□□ -1.55
PNKP-226ENST00000636840 SEC11AP67812 179 aa5.39□□□□□ -1.55
PNKP-226ENST00000636840 RNASE13Q5GAN3 156 aaKnown RBP5.39□□□□□ -1.55
PNKP-226ENST00000636840 Q6ZUT4 128 aa5.39□□□□□ -1.55
PNKP-226ENST00000636840 SCGB3A1Q96QR1 104 aa5.39□□□□□ -1.55
PNKP-226ENST00000636840 PKHD1P08F94 4074 aa5.39□□□□□ -1.55
PNKP-226ENST00000636840 LINC00614P0C842 121 aa5.38□□□□□ -1.55
PNKP-226ENST00000636840 FOXI1Q12951 378 aa5.38□□□□□ -1.55
PNKP-226ENST00000636840 ERASQ7Z444 233 aa5.38□□□□□ -1.55
PNKP-226ENST00000636840 TOMM6Q96B49 74 aa5.38□□□□□ -1.55
PNKP-226ENST00000636840 OPRPNQ99935 248 aaPredicted RBP5.38□□□□□ -1.55
PNKP-226ENST00000636840 PKIGQ9Y2B9 76 aa5.38□□□□□ -1.55
PNKP-226ENST00000636840 IGLV4-3A0A075B6K6 122 aa5.37□□□□□ -1.55
PNKP-226ENST00000636840 KRTAP10-1P60331 282 aa5.37□□□□□ -1.55
PNKP-226ENST00000636840 CBLN2Q8IUK8 224 aa5.37□□□□□ -1.55
PNKP-226ENST00000636840 C9orf163Q8N9P6 203 aa5.37□□□□□ -1.55
PNKP-226ENST00000636840 DPH3Q96FX2 82 aa5.37□□□□□ -1.55
PNKP-226ENST00000636840 TIMM17AQ99595 171 aa5.37□□□□□ -1.55
PNKP-226ENST00000636840 LRP1BQ9NZR2 4599 aa5.36□□□□□ -1.55
PNKP-226ENST00000636840 IGHV3-64A0A075B6Q5 118 aa5.36□□□□□ -1.55
PNKP-226ENST00000636840 LINC01546A6NGU7 62 aa5.36□□□□□ -1.55
PNKP-226ENST00000636840 IGIPA6NJ69 53 aa5.36□□□□□ -1.55
PNKP-226ENST00000636840 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.36□□□□□ -1.55
PNKP-226ENST00000636840 CNBPP62633 177 aaKnown RBP5.36□□□□□ -1.55
PNKP-226ENST00000636840 HIGD2BQ4VC39 106 aa5.36□□□□□ -1.55
PNKP-226ENST00000636840 C5orf38Q86SI9 138 aa5.36□□□□□ -1.55
PNKP-226ENST00000636840 C18orf32Q8TCD1 76 aa5.36□□□□□ -1.55
PNKP-226ENST00000636840 DNAH5Q8TE73 4624 aa5.35□□□□□ -1.55
PNKP-226ENST00000636840 GVQW2A0A096LPI5 108 aaPredicted RBP5.35□□□□□ -1.55
PNKP-226ENST00000636840 F8WDY8 70 aa5.35□□□□□ -1.55
PNKP-226ENST00000636840 BAGE3Q86Y29 109 aa5.35□□□□□ -1.55
PNKP-226ENST00000636840 YPEL4Q96NS1 127 aa5.35□□□□□ -1.55
PNKP-226ENST00000636840 AMELXQ99217 191 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms