RNA–Protein interactions for RNA: ENST00000636769.1

SCN2A-213, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

TSL 5

Gene SCN2A, Length 8,573 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-213ENST00000636769 COL4A3Q01955 1670 aa4.52□□□□□ -1.69
SCN2A-213ENST00000636769 ZNF73O43830 326 aaPredicted RBP4.52□□□□□ -1.69
SCN2A-213ENST00000636769 Q8N814 137 aa4.52□□□□□ -1.69
SCN2A-213ENST00000636769 FRMPD3Q5JV73 1810 aa4.52□□□□□ -1.69
SCN2A-213ENST00000636769 A0A096LNJ9 63 aa4.51□□□□□ -1.69
SCN2A-213ENST00000636769 DEFB1P60022 68 aa4.51□□□□□ -1.69
SCN2A-213ENST00000636769 DEFB136Q30KP8 78 aa4.51□□□□□ -1.69
SCN2A-213ENST00000636769 PLA2G5P39877 138 aa4.51□□□□□ -1.69
SCN2A-213ENST00000636769 CXCL6P80162 114 aa4.51□□□□□ -1.69
SCN2A-213ENST00000636769 Q6ZTI0 123 aa4.51□□□□□ -1.69
SCN2A-213ENST00000636769 C3orf84H3BNL1 204 aa4.51□□□□□ -1.69
SCN2A-213ENST00000636769 PLXND1Q9Y4D7 1925 aa4.51□□□□□ -1.69
SCN2A-213ENST00000636769 ACACAQ13085 2346 aa4.51□□□□□ -1.69
SCN2A-213ENST00000636769 CRYGDP07320 174 aa4.51□□□□□ -1.69
SCN2A-213ENST00000636769 C4orf48Q5BLP8 95 aa4.51□□□□□ -1.69
SCN2A-213ENST00000636769 PLA2G2CQ5R387 149 aa4.51□□□□□ -1.69
SCN2A-213ENST00000636769 MED13Q9UHV7 2174 aa4.51□□□□□ -1.69
SCN2A-213ENST00000636769 C1orf229Q6ZS94 237 aaPredicted RBP4.5□□□□□ -1.69
SCN2A-213ENST00000636769 C11orf21Q9P2W6 132 aa4.5□□□□□ -1.69
SCN2A-213ENST00000636769 TICRRQ7Z2Z1 1910 aa4.5□□□□□ -1.69
SCN2A-213ENST00000636769 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.5□□□□□ -1.69
SCN2A-213ENST00000636769 hDV103S1A0JD37 113 aa4.5□□□□□ -1.69
SCN2A-213ENST00000636769 LY6LH3BQJ8 138 aa4.5□□□□□ -1.69
SCN2A-213ENST00000636769 IGHV4-38-2P0DP08 117 aa4.5□□□□□ -1.69
SCN2A-213ENST00000636769 MGAMO43451 1857 aa4.5□□□□□ -1.69
SCN2A-213ENST00000636769 RIF1Q5UIP0 2472 aaKnown RBP4.5□□□□□ -1.69
SCN2A-213ENST00000636769 HELZP42694 1942 aaKnown RBP4.5□□□□□ -1.69
SCN2A-213ENST00000636769 EP400Q96L91 3159 aa4.5□□□□□ -1.69
SCN2A-213ENST00000636769 FBXL19-AS1Q494R0 122 aa4.5□□□□□ -1.69
SCN2A-213ENST00000636769 WFDC13Q8IUB5 93 aa4.5□□□□□ -1.69
SCN2A-213ENST00000636769 A8MZ25 164 aa4.5□□□□□ -1.69
SCN2A-213ENST00000636769 HIGD2AQ9BW72 106 aa4.5□□□□□ -1.69
SCN2A-213ENST00000636769 NCKAP5O14513 1909 aa4.5□□□□□ -1.69
SCN2A-213ENST00000636769 IGHV4-61A0A0C4DH41 118 aa4.49□□□□□ -1.69
SCN2A-213ENST00000636769 PRO0461Q9UI25 63 aa4.49□□□□□ -1.69
SCN2A-213ENST00000636769 LINC01546A6NGU7 62 aa4.49□□□□□ -1.69
SCN2A-213ENST00000636769 PRR4Q16378 134 aa4.49□□□□□ -1.69
SCN2A-213ENST00000636769 FNDC1Q4ZHG4 1894 aaPredicted RBP4.49□□□□□ -1.69
SCN2A-213ENST00000636769 SBSPONQ8IVN8 264 aa4.49□□□□□ -1.69
SCN2A-213ENST00000636769 AMELXQ99217 191 aa4.49□□□□□ -1.69
SCN2A-213ENST00000636769 CELA1Q9UNI1 258 aa4.49□□□□□ -1.69
SCN2A-213ENST00000636769 DOCK7Q96N67 2140 aa4.49□□□□□ -1.69
SCN2A-213ENST00000636769 PLAC8L1A1L4L8 177 aa4.49□□□□□ -1.69
SCN2A-213ENST00000636769 MSMPQ1L6U9 139 aa4.49□□□□□ -1.69
SCN2A-213ENST00000636769 TNFRSF13BO14836 293 aaPredicted RBP4.49□□□□□ -1.69
SCN2A-213ENST00000636769 Q96MF0 132 aa4.49□□□□□ -1.69
SCN2A-213ENST00000636769 DAZAP2Q15038 168 aaPredicted RBP4.49□□□□□ -1.69
SCN2A-213ENST00000636769 LINC00242Q5T6M2 205 aa4.49□□□□□ -1.69
SCN2A-213ENST00000636769 SYCNQ0VAF6 134 aa4.48□□□□□ -1.69
SCN2A-213ENST00000636769 CDC42SE2Q9NRR3 84 aa4.48□□□□□ -1.69
SCN2A-213ENST00000636769 COL6A6A6NMZ7 2263 aa4.48□□□□□ -1.69
SCN2A-213ENST00000636769 IGLV2-18A0A075B6J9 118 aa4.48□□□□□ -1.69
SCN2A-213ENST00000636769 SMIM1B2RUZ4 78 aa4.48□□□□□ -1.69
SCN2A-213ENST00000636769 FAM30AQ9NZY2 134 aa4.48□□□□□ -1.69
SCN2A-213ENST00000636769 ABCA4P78363 2273 aa4.48□□□□□ -1.69
SCN2A-213ENST00000636769 ZFP36P26651 326 aaKnown RBP4.48□□□□□ -1.69
SCN2A-213ENST00000636769 FAM19A1Q7Z5A9 133 aa4.48□□□□□ -1.69
SCN2A-213ENST00000636769 ZGRF1Q86YA3 2104 aa4.48□□□□□ -1.69
SCN2A-213ENST00000636769 LINC00959A0A1B0GUT2 108 aa4.48□□□□□ -1.69
SCN2A-213ENST00000636769 C22orf34Q6ZV56 151 aa4.48□□□□□ -1.69
SCN2A-213ENST00000636769 TSPEAR-AS2P59090 65 aa4.48□□□□□ -1.69
SCN2A-213ENST00000636769 Q8N6K4 173 aa4.48□□□□□ -1.69
SCN2A-213ENST00000636769 LINC00208Q96KT6 92 aa4.48□□□□□ -1.69
SCN2A-213ENST00000636769 GAS8-AS1O95177 125 aa4.48□□□□□ -1.69
SCN2A-213ENST00000636769 LINC00846Q9NV44 126 aa4.48□□□□□ -1.69
SCN2A-213ENST00000636769 ZNF706Q9Y5V0 76 aaPredicted RBP4.48□□□□□ -1.69
SCN2A-213ENST00000636769 A0A1B0GW54 56 aa4.47□□□□□ -1.69
SCN2A-213ENST00000636769 PSPHP1O15172 72 aa4.47□□□□□ -1.69
SCN2A-213ENST00000636769 ESM1Q9NQ30 184 aa4.47□□□□□ -1.69
SCN2A-213ENST00000636769 Q6ZVQ6 151 aa4.47□□□□□ -1.69
SCN2A-213ENST00000636769 XAGE1AQ9HD64 81 aa4.47□□□□□ -1.69
SCN2A-213ENST00000636769 PRR9Q5T870 116 aa4.47□□□□□ -1.69
SCN2A-213ENST00000636769 DSCAML1Q8TD84 2053 aa4.46□□□□□ -1.69
SCN2A-213ENST00000636769 LINC01547P58512 204 aaPredicted RBP4.46□□□□□ -1.69
SCN2A-213ENST00000636769 DEFB114Q30KQ6 69 aa4.46□□□□□ -1.69
SCN2A-213ENST00000636769 A0A087WYN8 130 aa4.46□□□□□ -1.7
SCN2A-213ENST00000636769 PLXNB3Q9ULL4 1909 aa4.46□□□□□ -1.7
SCN2A-213ENST00000636769 A0A087WZ39 114 aa4.46□□□□□ -1.7
SCN2A-213ENST00000636769 F8W735 103 aaPredicted RBP4.46□□□□□ -1.7
SCN2A-213ENST00000636769 LINC01561Q8N1V8 128 aa4.46□□□□□ -1.7
SCN2A-213ENST00000636769 SMCPP49901 116 aaPredicted RBP4.46□□□□□ -1.7
SCN2A-213ENST00000636769 ADAMTSL4-AS1Q5T5F5 129 aa4.46□□□□□ -1.7
SCN2A-213ENST00000636769 GTF3C1Q12789 2109 aa4.46□□□□□ -1.7
SCN2A-213ENST00000636769 PIP4P1Q86T03 277 aa4.46□□□□□ -1.7
SCN2A-213ENST00000636769 IGHV4-30-2A0A087WSY4 118 aa4.45□□□□□ -1.7
SCN2A-213ENST00000636769 DEFB135Q30KP9 77 aa4.45□□□□□ -1.7
SCN2A-213ENST00000636769 ARHGAP21Q5T5U3 1957 aa4.45□□□□□ -1.7
SCN2A-213ENST00000636769 F8WDY8 70 aa4.45□□□□□ -1.7
SCN2A-213ENST00000636769 EGFEM1PQ0D2K5 195 aa4.45□□□□□ -1.7
SCN2A-213ENST00000636769 C1orf137Q5JT78 98 aa4.45□□□□□ -1.7
SCN2A-213ENST00000636769 CHCHD7Q9BUK0 85 aa4.45□□□□□ -1.7
SCN2A-213ENST00000636769 C4orf26Q17RF5 130 aa4.45□□□□□ -1.7
SCN2A-213ENST00000636769 DCANP1Q8TF63 244 aa4.45□□□□□ -1.7
SCN2A-213ENST00000636769 FREM1Q5H8C1 2179 aa4.44□□□□□ -1.7
SCN2A-213ENST00000636769 TTC28Q96AY4 2481 aa4.44□□□□□ -1.7
SCN2A-213ENST00000636769 MAPK1IP1LQ8NDC0 245 aa4.44□□□□□ -1.7
SCN2A-213ENST00000636769 LRCOL1A6NCL2 159 aa4.44□□□□□ -1.7
SCN2A-213ENST00000636769 C10orf142B7Z368 130 aa4.44□□□□□ -1.7
SCN2A-213ENST00000636769 ANAPC1Q9H1A4 1944 aa4.44□□□□□ -1.7
SCN2A-213ENST00000636769 COL4A4P53420 1690 aaPredicted RBP4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms