RNA–Protein interactions for RNA: ENST00000636443.1

SYNGAP1-215, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 79 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-215ENST00000636443 MGST2Q99735 147 aa0.73□□□□□ -2.29
SYNGAP1-215ENST00000636443 SLC25A2Q9BXI2 301 aa0.73□□□□□ -2.29
SYNGAP1-215ENST00000636443 KRTAP4-8Q9BYQ9 185 aa0.73□□□□□ -2.29
SYNGAP1-215ENST00000636443 MED9Q9NWA0 146 aa0.73□□□□□ -2.29
SYNGAP1-215ENST00000636443 PSENENQ9NZ42 101 aa0.73□□□□□ -2.29
SYNGAP1-215ENST00000636443 IGHV3OR16-9A0A0B4J2B5 98 aa0.72□□□□□ -2.29
SYNGAP1-215ENST00000636443 UBE2L5PA0A1B0GUS4 154 aa0.72□□□□□ -2.29
SYNGAP1-215ENST00000636443 A0A1W2PNM2 257 aa0.72□□□□□ -2.29
SYNGAP1-215ENST00000636443 FABP5P3A8MUU1 101 aa0.72□□□□□ -2.29
SYNGAP1-215ENST00000636443 A8MWL6 223 aa0.72□□□□□ -2.29
SYNGAP1-215ENST00000636443 SSSCA1O60232 199 aa0.72□□□□□ -2.29
SYNGAP1-215ENST00000636443 UPK1BO75841 260 aa0.72□□□□□ -2.29
SYNGAP1-215ENST00000636443 FOXA3P55318 350 aaPredicted RBP0.72□□□□□ -2.29
SYNGAP1-215ENST00000636443 TAS2R30P59541 319 aa0.72□□□□□ -2.29
SYNGAP1-215ENST00000636443 AP3S2P59780 193 aa0.72□□□□□ -2.29
SYNGAP1-215ENST00000636443 DNAL1Q4LDG9 190 aa0.72□□□□□ -2.29
SYNGAP1-215ENST00000636443 RNASE10Q5GAN6 216 aaKnown RBP0.72□□□□□ -2.29
SYNGAP1-215ENST00000636443 SPANXN2Q5MJ10 180 aa0.72□□□□□ -2.29
SYNGAP1-215ENST00000636443 SUMO4Q6EEV6 95 aa0.72□□□□□ -2.29
SYNGAP1-215ENST00000636443 RASL11AQ6T310 242 aa0.72□□□□□ -2.29
SYNGAP1-215ENST00000636443 SOSTDC1Q6X4U4 206 aa0.72□□□□□ -2.29
SYNGAP1-215ENST00000636443 TMEM91Q6ZNR0 172 aa0.72□□□□□ -2.29
SYNGAP1-215ENST00000636443 Q6ZNX1 250 aa0.72□□□□□ -2.29
SYNGAP1-215ENST00000636443 MIR17HGQ75NE6 70 aa0.72□□□□□ -2.29
SYNGAP1-215ENST00000636443 PACRGLQ8N7B6 248 aa0.72□□□□□ -2.29
SYNGAP1-215ENST00000636443 NUDT10Q8NFP7 164 aa0.72□□□□□ -2.29
SYNGAP1-215ENST00000636443 SMCR5Q8TEV8 140 aa0.72□□□□□ -2.29
SYNGAP1-215ENST00000636443 GLYATL2Q8WU03 294 aa0.72□□□□□ -2.29
SYNGAP1-215ENST00000636443 APH1BQ8WW43 257 aa0.72□□□□□ -2.29
SYNGAP1-215ENST00000636443 MRAP2Q96G30 205 aa0.72□□□□□ -2.29
SYNGAP1-215ENST00000636443 NUDT11Q96G61 164 aa0.72□□□□□ -2.29
SYNGAP1-215ENST00000636443 Q96NJ1 140 aa0.72□□□□□ -2.29
SYNGAP1-215ENST00000636443 KRTAP4-11Q9BYQ6 195 aa0.72□□□□□ -2.29
SYNGAP1-215ENST00000636443 OTORQ9NRC9 128 aa0.72□□□□□ -2.29
SYNGAP1-215ENST00000636443 NUDT15Q9NV35 164 aa0.72□□□□□ -2.29
SYNGAP1-215ENST00000636443 TXNL4BQ9NX01 149 aaKnown RBP0.72□□□□□ -2.29
SYNGAP1-215ENST00000636443 TOMM7Q9P0U1 55 aa0.72□□□□□ -2.29
SYNGAP1-215ENST00000636443 KCNIP3Q9Y2W7 256 aa0.72□□□□□ -2.29
SYNGAP1-215ENST00000636443 TGIF2-C20orf24A0A0A6YYL0 155 aa0.71□□□□□ -2.3
SYNGAP1-215ENST00000636443 LOC100130705A0A1B0GUX0 176 aa0.71□□□□□ -2.3
SYNGAP1-215ENST00000636443 ETDCA0A1B0GVM5 59 aa0.71□□□□□ -2.3
SYNGAP1-215ENST00000636443 KRBOX1C9JBD0 128 aa0.71□□□□□ -2.3
SYNGAP1-215ENST00000636443 M0QY20 66 aa0.71□□□□□ -2.3
SYNGAP1-215ENST00000636443 M0R378 163 aa0.71□□□□□ -2.3
SYNGAP1-215ENST00000636443 TMEM127O75204 238 aa0.71□□□□□ -2.3
SYNGAP1-215ENST00000636443 NCR2O95944 276 aa0.71□□□□□ -2.3
SYNGAP1-215ENST00000636443 SCGB1D2O95969 90 aa0.71□□□□□ -2.3
SYNGAP1-215ENST00000636443 ANXA3P12429 323 aa0.71□□□□□ -2.3
SYNGAP1-215ENST00000636443 PMCHP20382 165 aa0.71□□□□□ -2.3
SYNGAP1-215ENST00000636443 DEFA1P59665 94 aa0.71□□□□□ -2.3
SYNGAP1-215ENST00000636443 FABP5Q01469 135 aa0.71□□□□□ -2.3
SYNGAP1-215ENST00000636443 FLI1Q01543 452 aaPredicted RBP0.71□□□□□ -2.3
SYNGAP1-215ENST00000636443 IL18Q14116 193 aa0.71□□□□□ -2.3
SYNGAP1-215ENST00000636443 SPHARQ15513 63 aa0.71□□□□□ -2.3
SYNGAP1-215ENST00000636443 Q1RN00 199 aa0.71□□□□□ -2.3
SYNGAP1-215ENST00000636443 KRTAP19-8Q3LI54 63 aa0.71□□□□□ -2.3
SYNGAP1-215ENST00000636443 KRTAP20-2Q3LI61 65 aa0.71□□□□□ -2.3
SYNGAP1-215ENST00000636443 LINC00483Q53H64 154 aa0.71□□□□□ -2.3
SYNGAP1-215ENST00000636443 GCSAMLQ5JQS6 135 aa0.71□□□□□ -2.3
SYNGAP1-215ENST00000636443 SAPCD1Q5SSQ6 148 aa0.71□□□□□ -2.3
SYNGAP1-215ENST00000636443 C1orf195Q5TG92 126 aa0.71□□□□□ -2.3
SYNGAP1-215ENST00000636443 LYSMD2Q8IV50 215 aa0.71□□□□□ -2.3
SYNGAP1-215ENST00000636443 OR10AG1Q8NH19 301 aa0.71□□□□□ -2.3
SYNGAP1-215ENST00000636443 AP3S1Q92572 193 aa0.71□□□□□ -2.3
SYNGAP1-215ENST00000636443 RAB24Q969Q5 203 aa0.71□□□□□ -2.3
SYNGAP1-215ENST00000636443 FXYD5Q96DB9 178 aa0.71□□□□□ -2.3
SYNGAP1-215ENST00000636443 TPPP3Q9BW30 176 aa0.71□□□□□ -2.3
SYNGAP1-215ENST00000636443 CYSTM1Q9H1C7 97 aa0.71□□□□□ -2.3
SYNGAP1-215ENST00000636443 ACOT13Q9NPJ3 140 aa0.71□□□□□ -2.3
SYNGAP1-215ENST00000636443 NIT2Q9NQR4 276 aa0.71□□□□□ -2.3
SYNGAP1-215ENST00000636443 CDC42SE2Q9NRR3 84 aa0.71□□□□□ -2.3
SYNGAP1-215ENST00000636443 PYGO1Q9Y3Y4 419 aa0.71□□□□□ -2.3
SYNGAP1-215ENST00000636443 TRAV1-2A0A0B4J238 106 aa0.7□□□□□ -2.3
SYNGAP1-215ENST00000636443 PIGBOS1A0A0B4J2F0 54 aa0.7□□□□□ -2.3
SYNGAP1-215ENST00000636443 SERTM2A0A1B0GWG4 89 aa0.7□□□□□ -2.3
SYNGAP1-215ENST00000636443 CTDSP2O14595 271 aa0.7□□□□□ -2.3
SYNGAP1-215ENST00000636443 SH2D1AO60880 128 aa0.7□□□□□ -2.3
SYNGAP1-215ENST00000636443 SLC25A6P12236 298 aa0.7□□□□□ -2.3
SYNGAP1-215ENST00000636443 BCAP31P51572 246 aa0.7□□□□□ -2.3
SYNGAP1-215ENST00000636443 SMAGPQ0VAQ4 97 aa0.7□□□□□ -2.3
SYNGAP1-215ENST00000636443 KHDC3LQ587J8 217 aa0.7□□□□□ -2.3
SYNGAP1-215ENST00000636443 C6orf226Q5I0X4 101 aa0.7□□□□□ -2.3
SYNGAP1-215ENST00000636443 C22orf42Q6IC83 251 aa0.7□□□□□ -2.3
SYNGAP1-215ENST00000636443 IGFL1Q6UW32 110 aa0.7□□□□□ -2.3
SYNGAP1-215ENST00000636443 SMIM29Q86T20 159 aa0.7□□□□□ -2.3
SYNGAP1-215ENST00000636443 SNX29P2Q8IUI4 249 aa0.7□□□□□ -2.3
SYNGAP1-215ENST00000636443 OR5H6Q8NGV6 325 aa0.7□□□□□ -2.3
SYNGAP1-215ENST00000636443 S100A16Q96FQ6 103 aaKnown RBP0.7□□□□□ -2.3
SYNGAP1-215ENST00000636443 FAM167A-AS1Q96KT0 104 aa0.7□□□□□ -2.3
SYNGAP1-215ENST00000636443 FAM218AQ96MZ4 157 aa0.7□□□□□ -2.3
SYNGAP1-215ENST00000636443 SEC22CQ9BRL7 303 aa0.7□□□□□ -2.3
SYNGAP1-215ENST00000636443 MRPS26Q9BYN8 205 aaKnown RBP0.7□□□□□ -2.3
SYNGAP1-215ENST00000636443 FAM107BQ9H098 131 aa0.7□□□□□ -2.3
SYNGAP1-215ENST00000636443 MBD2Q9UBB5 411 aa0.7□□□□□ -2.3
SYNGAP1-215ENST00000636443 RSL24D1Q9UHA3 163 aaKnown RBP0.7□□□□□ -2.3
SYNGAP1-215ENST00000636443 LSM2Q9Y333 95 aaKnown RBP0.7□□□□□ -2.3
SYNGAP1-215ENST00000636443 SMIM31A0A1B0GVY4 71 aa0.69□□□□□ -2.3
SYNGAP1-215ENST00000636443 TCRBV3S1A0A5B6 114 aa0.69□□□□□ -2.3
SYNGAP1-215ENST00000636443 C9orf170A2RU37 121 aa0.69□□□□□ -2.3
SYNGAP1-215ENST00000636443 C7orf77A4D0Y5 90 aa0.69□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms