RNA–Protein interactions for RNA: ENST00000636238.1

CIITA-214, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5

Gene CIITA, Length 498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-214ENST00000636238 RPL32P62910 135 aaKnown RBP5.05□□□□□ -1.6
CIITA-214ENST00000636238 HHLA3Q9XRX5 114 aa5.05□□□□□ -1.6
CIITA-214ENST00000636238 TRBV7-3A0A075B6L6 115 aa5.04□□□□□ -1.6
CIITA-214ENST00000636238 A0A0J9YY99 117 aa5.04□□□□□ -1.6
CIITA-214ENST00000636238 TRBV6-4A0A1B0GX49 114 aa5.04□□□□□ -1.6
CIITA-214ENST00000636238 A6NJY4 79 aa5.04□□□□□ -1.6
CIITA-214ENST00000636238 H0Y8G0 127 aa5.04□□□□□ -1.6
CIITA-214ENST00000636238 CIDEAO60543 219 aa5.04□□□□□ -1.6
CIITA-214ENST00000636238 SCGB1D1O95968 90 aa5.04□□□□□ -1.6
CIITA-214ENST00000636238 CRYBA4P53673 196 aa5.04□□□□□ -1.6
CIITA-214ENST00000636238 RPL39P62891 51 aaKnown RBP5.04□□□□□ -1.6
CIITA-214ENST00000636238 RPL36AP83881 106 aaKnown RBP5.04□□□□□ -1.6
CIITA-214ENST00000636238 ORMDL2Q53FV1 153 aa5.04□□□□□ -1.6
CIITA-214ENST00000636238 PYY3Q5JQD4 70 aa5.04□□□□□ -1.6
CIITA-214ENST00000636238 RPL36ALQ969Q0 106 aaKnown RBP5.04□□□□□ -1.6
CIITA-214ENST00000636238 KIR2DL4Q99706 377 aa5.04□□□□□ -1.6
CIITA-214ENST00000636238 TRAV9-2A0A087WT02 112 aa5.03□□□□□ -1.6
CIITA-214ENST00000636238 TRAV26-1A0A087WT03 109 aa5.03□□□□□ -1.6
CIITA-214ENST00000636238 TRBV10-1A0A0K0K1A3 114 aa5.03□□□□□ -1.6
CIITA-214ENST00000636238 PAX4O43316 350 aa5.03□□□□□ -1.6
CIITA-214ENST00000636238 GYPEP15421 78 aa5.03□□□□□ -1.6
CIITA-214ENST00000636238 UBE2D3P61077 147 aa5.03□□□□□ -1.6
CIITA-214ENST00000636238 UBE2D2P62837 147 aa5.03□□□□□ -1.6
CIITA-214ENST00000636238 JOSD1Q15040 202 aaPredicted RBP5.03□□□□□ -1.6
CIITA-214ENST00000636238 RHOHQ15669 191 aa5.03□□□□□ -1.6
CIITA-214ENST00000636238 ESRGQ1W209 222 aa5.03□□□□□ -1.6
CIITA-214ENST00000636238 C2orf66Q6UXQ4 117 aa5.03□□□□□ -1.6
CIITA-214ENST00000636238 LINC00518Q8N0U6 118 aa5.03□□□□□ -1.6
CIITA-214ENST00000636238 Q8N976 141 aa5.03□□□□□ -1.6
CIITA-214ENST00000636238 NTN5Q8WTR8 489 aaPredicted RBP5.03□□□□□ -1.6
CIITA-214ENST00000636238 TOMM6Q96B49 74 aa5.03□□□□□ -1.6
CIITA-214ENST00000636238 IFI27L1Q96BM0 104 aa5.03□□□□□ -1.6
CIITA-214ENST00000636238 PRADC1Q9BSG0 188 aa5.03□□□□□ -1.6
CIITA-214ENST00000636238 HSPB8Q9UJY1 196 aa5.03□□□□□ -1.6
CIITA-214ENST00000636238 A0A087WTM6 91 aa5.02□□□□□ -1.61
CIITA-214ENST00000636238 A0A096LPF7 62 aa5.02□□□□□ -1.61
CIITA-214ENST00000636238 SYS1-DBNDD2H3BUS1 97 aa5.02□□□□□ -1.61
CIITA-214ENST00000636238 K7EMI3 77 aa5.02□□□□□ -1.61
CIITA-214ENST00000636238 SIVA1O15304 175 aa5.02□□□□□ -1.61
CIITA-214ENST00000636238 GCSHP23434 173 aa5.02□□□□□ -1.61
CIITA-214ENST00000636238 COTL1Q14019 142 aa5.02□□□□□ -1.61
CIITA-214ENST00000636238 VSIG2Q96IQ7 327 aa5.02□□□□□ -1.61
CIITA-214ENST00000636238 SCGB3A1Q96QR1 104 aa5.02□□□□□ -1.61
CIITA-214ENST00000636238 C12orf57Q99622 126 aa5.02□□□□□ -1.61
CIITA-214ENST00000636238 PMCHL2Q9BQD1 86 aa5.02□□□□□ -1.61
CIITA-214ENST00000636238 CHCHD7Q9BUK0 85 aa5.02□□□□□ -1.61
CIITA-214ENST00000636238 MAP1LC3CQ9BXW4 147 aa5.02□□□□□ -1.61
CIITA-214ENST00000636238 PRO0255Q9UI72 69 aa5.02□□□□□ -1.61
CIITA-214ENST00000636238 CYSLTR1Q9Y271 337 aa5.02□□□□□ -1.61
CIITA-214ENST00000636238 DNAH8Q96JB1 4490 aa5.02□□□□□ -1.61
CIITA-214ENST00000636238 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.01□□□□□ -1.61
CIITA-214ENST00000636238 IGKV2-29A2NJV5 120 aaPredicted RBP5.01□□□□□ -1.61
CIITA-214ENST00000636238 PLA2G1BP04054 148 aaKnown RBP5.01□□□□□ -1.61
CIITA-214ENST00000636238 PRSS1P07477 247 aa5.01□□□□□ -1.61
CIITA-214ENST00000636238 SMIM6P0DI80 62 aa5.01□□□□□ -1.61
CIITA-214ENST00000636238 KRTAP10-1P60331 282 aa5.01□□□□□ -1.61
CIITA-214ENST00000636238 ZC2HC1BQ5TFG8 222 aa5.01□□□□□ -1.61
CIITA-214ENST00000636238 NTM-AS1Q6ZSK4 140 aa5.01□□□□□ -1.61
CIITA-214ENST00000636238 ATOH7Q8N100 152 aa5.01□□□□□ -1.61
CIITA-214ENST00000636238 C20orf203Q8NBC4 194 aa5.01□□□□□ -1.61
CIITA-214ENST00000636238 OPRPNQ99935 248 aaPredicted RBP5.01□□□□□ -1.61
CIITA-214ENST00000636238 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5□□□□□ -1.61
CIITA-214ENST00000636238 ATP5LO75964 103 aa5□□□□□ -1.61
CIITA-214ENST00000636238 LINC00694P0DN24 101 aa5□□□□□ -1.61
CIITA-214ENST00000636238 PET117Q6UWS5 81 aa5□□□□□ -1.61
CIITA-214ENST00000636238 Q6ZN92 141 aa5□□□□□ -1.61
CIITA-214ENST00000636238 DAZ4Q86SG3 579 aaKnown RBP5□□□□□ -1.61
CIITA-214ENST00000636238 ATP6V0E2Q8NHE4 81 aa5□□□□□ -1.61
CIITA-214ENST00000636238 DAZ3Q9NR90 486 aaKnown RBP5□□□□□ -1.61
CIITA-214ENST00000636238 IGIPA6NJ69 53 aa4.99□□□□□ -1.61
CIITA-214ENST00000636238 G0S2P27469 103 aa4.99□□□□□ -1.61
CIITA-214ENST00000636238 ERASQ7Z444 233 aa4.99□□□□□ -1.61
CIITA-214ENST00000636238 C10orf126Q8N4M7 172 aa4.99□□□□□ -1.61
CIITA-214ENST00000636238 BAALCQ8WXS3 180 aa4.99□□□□□ -1.61
CIITA-214ENST00000636238 IGLV4-3A0A075B6K6 122 aa4.98□□□□□ -1.61
CIITA-214ENST00000636238 C20orf202A1L168 122 aa4.98□□□□□ -1.61
CIITA-214ENST00000636238 OXTP01178 125 aa4.98□□□□□ -1.61
CIITA-214ENST00000636238 GAGE6Q13070 117 aa4.98□□□□□ -1.61
CIITA-214ENST00000636238 MAJINQ3KP22 176 aa4.98□□□□□ -1.61
CIITA-214ENST00000636238 RNASE13Q5GAN3 156 aaKnown RBP4.98□□□□□ -1.61
CIITA-214ENST00000636238 LINC01545Q5VT33 79 aa4.98□□□□□ -1.61
CIITA-214ENST00000636238 TMEM141Q96I45 108 aa4.98□□□□□ -1.61
CIITA-214ENST00000636238 TMEM243Q9BU79 118 aa4.98□□□□□ -1.61
CIITA-214ENST00000636238 ICOSQ9Y6W8 199 aa4.98□□□□□ -1.61
CIITA-214ENST00000636238 TRBV25-1A0A075B6N4 114 aa4.97□□□□□ -1.61
CIITA-214ENST00000636238 A0A087WX48 190 aa4.97□□□□□ -1.61
CIITA-214ENST00000636238 TRBV6-8A0A0A6YYG3 113 aa4.97□□□□□ -1.61
CIITA-214ENST00000636238 hDV102S1A0JD36 115 aa4.97□□□□□ -1.61
CIITA-214ENST00000636238 SMR3BP02814 79 aaPredicted RBP4.97□□□□□ -1.61
CIITA-214ENST00000636238 ODF1Q14990 250 aa4.97□□□□□ -1.61
CIITA-214ENST00000636238 MRPL23Q16540 153 aaKnown RBP4.97□□□□□ -1.61
CIITA-214ENST00000636238 TEX43Q6ZNM6 134 aa4.97□□□□□ -1.61
CIITA-214ENST00000636238 FAM104AQ969W3 186 aa4.97□□□□□ -1.61
CIITA-214ENST00000636238 TIMM17AQ99595 171 aa4.97□□□□□ -1.61
CIITA-214ENST00000636238 CHCHD5Q9BSY4 110 aa4.97□□□□□ -1.61
CIITA-214ENST00000636238 GTSF1LQ9H1H1 148 aa4.97□□□□□ -1.61
CIITA-214ENST00000636238 PRO1933Q9H354 126 aa4.97□□□□□ -1.61
CIITA-214ENST00000636238 MRPL35Q9NZE8 188 aaKnown RBP4.97□□□□□ -1.61
CIITA-214ENST00000636238 UBE2D4Q9Y2X8 147 aa4.97□□□□□ -1.61
CIITA-214ENST00000636238 CHTOPQ9Y3Y2 248 aaKnown RBP4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 137.8 ms