RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 PTTG1IPP53801 180 aa10.91□□□□□ -0.66
CLN6-212ENST00000636020 ISOC2Q96AB3 205 aa10.91□□□□□ -0.66
CLN6-212ENST00000636020 CARD19Q96LW7 228 aa10.91□□□□□ -0.66
CLN6-212ENST00000636020 LINC00526Q96FQ7 95 aa10.9□□□□□ -0.66
CLN6-212ENST00000636020 MUC21A0A140T8X8 626 aa10.89□□□□□ -0.67
CLN6-212ENST00000636020 H0Y9J4 135 aa10.89□□□□□ -0.67
CLN6-212ENST00000636020 M0QY20 66 aa10.89□□□□□ -0.67
CLN6-212ENST00000636020 KRTAP1-4P0C5Y4 121 aa10.89□□□□□ -0.67
CLN6-212ENST00000636020 AMTP48728 403 aa10.89□□□□□ -0.67
CLN6-212ENST00000636020 RHEBQ15382 184 aa10.89□□□□□ -0.67
CLN6-212ENST00000636020 SSBP4Q9BWG4 385 aaPredicted RBP10.89□□□□□ -0.67
CLN6-212ENST00000636020 C7orf77A4D0Y5 90 aa10.88□□□□□ -0.67
CLN6-212ENST00000636020 UBE2L6O14933 153 aa10.88□□□□□ -0.67
CLN6-212ENST00000636020 SNAI2O43623 268 aa10.88□□□□□ -0.67
CLN6-212ENST00000636020 IGLV7-43P04211 117 aa10.88□□□□□ -0.67
CLN6-212ENST00000636020 SPANXN1Q5VSR9 72 aa10.88□□□□□ -0.67
CLN6-212ENST00000636020 FOXI1Q12951 378 aa10.87□□□□□ -0.67
CLN6-212ENST00000636020 GAGE2BQ13066 116 aa10.87□□□□□ -0.67
CLN6-212ENST00000636020 PGLYRP4Q96LB8 373 aa10.87□□□□□ -0.67
CLN6-212ENST00000636020 C19orf71A6NCJ1 209 aa10.86□□□□□ -0.67
CLN6-212ENST00000636020 CXCL1P09341 107 aa10.86□□□□□ -0.67
CLN6-212ENST00000636020 SMIM17P0DL12 118 aa10.86□□□□□ -0.67
CLN6-212ENST00000636020 FAM231DQ6ZW35 169 aa10.86□□□□□ -0.67
CLN6-212ENST00000636020 BIN3Q9NQY0 253 aa10.86□□□□□ -0.67
CLN6-212ENST00000636020 OSTCQ9NRP0 149 aa10.86□□□□□ -0.67
CLN6-212ENST00000636020 OR5AL1P0C617 328 aa10.85□□□□□ -0.67
CLN6-212ENST00000636020 SSTP61278 116 aa10.85□□□□□ -0.67
CLN6-212ENST00000636020 C9orf116Q5BN46 136 aaPredicted RBP10.85□□□□□ -0.67
CLN6-212ENST00000636020 RNASE7Q9H1E1 156 aaKnown RBP10.85□□□□□ -0.67
CLN6-212ENST00000636020 RPS10P5Q9NQ39 176 aa10.85□□□□□ -0.67
CLN6-212ENST00000636020 LOC107984640A0A0U1RRK4 108 aa10.84□□□□□ -0.67
CLN6-212ENST00000636020 SCO1O75880 301 aa10.84□□□□□ -0.67
CLN6-212ENST00000636020 SYCNQ0VAF6 134 aa10.84□□□□□ -0.67
CLN6-212ENST00000636020 PHF5AQ7RTV0 110 aaKnown RBP10.84□□□□□ -0.67
CLN6-212ENST00000636020 ANAPC16Q96DE5 110 aa10.84□□□□□ -0.67
CLN6-212ENST00000636020 AP1S3Q96PC3 154 aa10.84□□□□□ -0.67
CLN6-212ENST00000636020 IGHV1-58A0A0C4DH39 117 aa10.83□□□□□ -0.68
CLN6-212ENST00000636020 MT-ND4LP03901 98 aa10.83□□□□□ -0.68
CLN6-212ENST00000636020 UBE2D1P51668 147 aa10.83□□□□□ -0.68
CLN6-212ENST00000636020 SUMO4Q6EEV6 95 aa10.83□□□□□ -0.68
CLN6-212ENST00000636020 NUDT10Q8NFP7 164 aa10.83□□□□□ -0.68
CLN6-212ENST00000636020 NUDT11Q96G61 164 aa10.83□□□□□ -0.68
CLN6-212ENST00000636020 CTDSP1Q9GZU7 261 aa10.83□□□□□ -0.68
CLN6-212ENST00000636020 V9GYV3 84 aa10.83□□□□□ -0.68
CLN6-212ENST00000636020 PPP1R2P9O14990 202 aa10.82□□□□□ -0.68
CLN6-212ENST00000636020 RPL13AP40429 203 aaKnown RBP10.82□□□□□ -0.68
CLN6-212ENST00000636020 TMEM242Q9NWH2 141 aa10.82□□□□□ -0.68
CLN6-212ENST00000636020 MGPP08493 103 aa10.81□□□□□ -0.68
CLN6-212ENST00000636020 GATCO43716 136 aaKnown RBP10.8□□□□□ -0.68
CLN6-212ENST00000636020 TSPAN13O95857 204 aa10.8□□□□□ -0.68
CLN6-212ENST00000636020 COTL1Q14019 142 aa10.8□□□□□ -0.68
CLN6-212ENST00000636020 CBLN2Q8IUK8 224 aa10.8□□□□□ -0.68
CLN6-212ENST00000636020 RPP21Q9H633 154 aaKnown RBP10.8□□□□□ -0.68
CLN6-212ENST00000636020 CT83Q5H943 113 aa10.79□□□□□ -0.68
CLN6-212ENST00000636020 RASL11AQ6T310 242 aa10.79□□□□□ -0.68
CLN6-212ENST00000636020 ZNF561-AS1K7EIQ3 104 aa10.78□□□□□ -0.68
CLN6-212ENST00000636020 FGF6P10767 208 aa10.78□□□□□ -0.68
CLN6-212ENST00000636020 XCL1P47992 114 aa10.78□□□□□ -0.68
CLN6-212ENST00000636020 KRTAP11-1Q8IUC1 163 aa10.78□□□□□ -0.68
CLN6-212ENST00000636020 NIT2Q9NQR4 276 aa10.78□□□□□ -0.68
CLN6-212ENST00000636020 SMCO4Q9NRQ5 59 aa10.78□□□□□ -0.68
CLN6-212ENST00000636020 CAMPP49913 170 aa10.77□□□□□ -0.69
CLN6-212ENST00000636020 OR2D3Q8NGH3 330 aa10.77□□□□□ -0.69
CLN6-212ENST00000636020 YPEL4Q96NS1 127 aa10.77□□□□□ -0.69
CLN6-212ENST00000636020 A0A087WZ39 114 aa10.76□□□□□ -0.69
CLN6-212ENST00000636020 AMMECR1LQ6DCA0 310 aa10.76□□□□□ -0.69
CLN6-212ENST00000636020 IMMP2LQ96T52 175 aa10.76□□□□□ -0.69
CLN6-212ENST00000636020 SMIM27A0A1W2PRY6 76 aa10.75□□□□□ -0.69
CLN6-212ENST00000636020 CCL25O15444 150 aa10.75□□□□□ -0.69
CLN6-212ENST00000636020 RNASEKQ6P5S7 137 aaKnown RBP10.75□□□□□ -0.69
CLN6-212ENST00000636020 OR5A1Q8NGJ0 315 aa10.75□□□□□ -0.69
CLN6-212ENST00000636020 TSKUQ8WUA8 353 aa10.75□□□□□ -0.69
CLN6-212ENST00000636020 A8MWL6 223 aa10.74□□□□□ -0.69
CLN6-212ENST00000636020 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.74□□□□□ -0.69
CLN6-212ENST00000636020 RPS20P60866 119 aaKnown RBP10.74□□□□□ -0.69
CLN6-212ENST00000636020 NUP35Q8NFH5 326 aa10.74□□□□□ -0.69
CLN6-212ENST00000636020 IGLV4-69A0A075B6H9 119 aa10.73□□□□□ -0.69
CLN6-212ENST00000636020 LINC00959A0A1B0GUT2 108 aa10.73□□□□□ -0.69
CLN6-212ENST00000636020 APOMO95445 188 aa10.73□□□□□ -0.69
CLN6-212ENST00000636020 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.72□□□□□ -0.69
CLN6-212ENST00000636020 IGKV2-29A2NJV5 120 aaPredicted RBP10.72□□□□□ -0.69
CLN6-212ENST00000636020 IGLC6P0CF74 106 aa10.72□□□□□ -0.69
CLN6-212ENST00000636020 S100PP25815 95 aa10.72□□□□□ -0.69
CLN6-212ENST00000636020 TRAV9-1A0A075B6T8 112 aa10.71□□□□□ -0.69
CLN6-212ENST00000636020 XKRY2A2RUG3 117 aa10.71□□□□□ -0.69
CLN6-212ENST00000636020 NTF3P20783 257 aa10.71□□□□□ -0.69
CLN6-212ENST00000636020 FOXA3P55318 350 aaPredicted RBP10.71□□□□□ -0.69
CLN6-212ENST00000636020 TRBV24-1A0A075B6N3 115 aa10.7□□□□□ -0.7
CLN6-212ENST00000636020 COLCA2A8K830 154 aa10.7□□□□□ -0.7
CLN6-212ENST00000636020 HIGD1CA8MV81 97 aa10.7□□□□□ -0.7
CLN6-212ENST00000636020 H7C423 109 aa10.7□□□□□ -0.7
CLN6-212ENST00000636020 RPL18AQ02543 176 aaKnown RBP10.7□□□□□ -0.7
CLN6-212ENST00000636020 NAT8BQ9UHF3 227 aa10.7□□□□□ -0.7
CLN6-212ENST00000636020 TGIF2-C20orf24A0A0A6YYL0 155 aa10.69□□□□□ -0.7
CLN6-212ENST00000636020 CTRLP40313 264 aa10.69□□□□□ -0.7
CLN6-212ENST00000636020 CD164L2Q6UWJ8 174 aa10.69□□□□□ -0.7
CLN6-212ENST00000636020 CDIP1Q9H305 208 aa10.69□□□□□ -0.7
CLN6-212ENST00000636020 CAMK2N2Q96S95 79 aa10.68□□□□□ -0.7
CLN6-212ENST00000636020 NCR2O95944 276 aa10.67□□□□□ -0.7
CLN6-212ENST00000636020 ZNF25P17030 456 aaPredicted RBP10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms