RNA–Protein interactions for RNA: ENST00000635970.1

CLN8-209, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-209ENST00000635970 ERG28Q9UKR5 140 aa11.27□□□□□ -0.61
CLN8-209ENST00000635970 SLC25A20O43772 301 aa11.27□□□□□ -0.61
CLN8-209ENST00000635970 IGHV3-33P01772 117 aa11.27□□□□□ -0.61
CLN8-209ENST00000635970 EMP1P54849 157 aa11.26□□□□□ -0.61
CLN8-209ENST00000635970 ANKRD29Q8N6D5 301 aa11.26□□□□□ -0.61
CLN8-209ENST00000635970 TMEM263Q8WUH6 116 aaKnown RBP11.26□□□□□ -0.61
CLN8-209ENST00000635970 PTH2Q96A98 100 aa11.26□□□□□ -0.61
CLN8-209ENST00000635970 M0QY20 66 aa11.25□□□□□ -0.61
CLN8-209ENST00000635970 SFTA2Q6UW10 78 aa11.25□□□□□ -0.61
CLN8-209ENST00000635970 MRAPQ8TCY5 172 aa11.25□□□□□ -0.61
CLN8-209ENST00000635970 MUC4Q99102 2169 aa11.25□□□□□ -0.61
CLN8-209ENST00000635970 A4D1N5 150 aa11.25□□□□□ -0.61
CLN8-209ENST00000635970 DEFB1P60022 68 aa11.25□□□□□ -0.61
CLN8-209ENST00000635970 TRAV26-1A0A087WT03 109 aa11.24□□□□□ -0.61
CLN8-209ENST00000635970 A0A087WWL8 130 aa11.24□□□□□ -0.61
CLN8-209ENST00000635970 IGHV3-16A0A0C4DH30 117 aa11.24□□□□□ -0.61
CLN8-209ENST00000635970 ATXN8Q156A1 80 aa11.24□□□□□ -0.61
CLN8-209ENST00000635970 ZFAND6Q6FIF0 208 aa11.24□□□□□ -0.61
CLN8-209ENST00000635970 C20orf203Q8NBC4 194 aa11.24□□□□□ -0.61
CLN8-209ENST00000635970 DCANP1Q8TF63 244 aa11.24□□□□□ -0.61
CLN8-209ENST00000635970 WFDC10AQ9H1F0 79 aa11.24□□□□□ -0.61
CLN8-209ENST00000635970 I3L3M4 83 aa11.23□□□□□ -0.61
CLN8-209ENST00000635970 RHODO00212 210 aa11.23□□□□□ -0.61
CLN8-209ENST00000635970 JPT2Q9H910 190 aa11.23□□□□□ -0.61
CLN8-209ENST00000635970 TRAV25A0A0B4J276 109 aa11.23□□□□□ -0.61
CLN8-209ENST00000635970 Q8N1Y9 231 aa11.23□□□□□ -0.61
CLN8-209ENST00000635970 SVIPQ8NHG7 77 aa11.23□□□□□ -0.61
CLN8-209ENST00000635970 EDA2RQ9HAV5 297 aa11.23□□□□□ -0.61
CLN8-209ENST00000635970 PYGO1Q9Y3Y4 419 aa11.23□□□□□ -0.61
CLN8-209ENST00000635970 TRAV12-3A0A0B4J271 114 aa11.22□□□□□ -0.61
CLN8-209ENST00000635970 TRBV30A0A0K0K1B3 111 aa11.22□□□□□ -0.61
CLN8-209ENST00000635970 M0R2P5 195 aa11.22□□□□□ -0.61
CLN8-209ENST00000635970 DEFB121Q5J5C9 76 aa11.22□□□□□ -0.61
CLN8-209ENST00000635970 C9JAW5 83 aa11.21□□□□□ -0.61
CLN8-209ENST00000635970 ZNF22P17026 224 aaPredicted RBP11.21□□□□□ -0.61
CLN8-209ENST00000635970 ZNF56Q15929 161 aa11.21□□□□□ -0.61
CLN8-209ENST00000635970 RPL13AP40429 203 aaKnown RBP11.21□□□□□ -0.62
CLN8-209ENST00000635970 MUSTN1Q8IVN3 82 aa11.21□□□□□ -0.62
CLN8-209ENST00000635970 SNRPD3P62318 126 aaKnown RBP11.2□□□□□ -0.62
CLN8-209ENST00000635970 RNF183Q96D59 192 aa11.2□□□□□ -0.62
CLN8-209ENST00000635970 IGHV1OR15-1A0A075B7D0 117 aa11.19□□□□□ -0.62
CLN8-209ENST00000635970 TRAV2A0A0B4J234 112 aa11.19□□□□□ -0.62
CLN8-209ENST00000635970 FAM74A4Q5TZK3 123 aa11.19□□□□□ -0.62
CLN8-209ENST00000635970 Q6Q795 121 aa11.19□□□□□ -0.62
CLN8-209ENST00000635970 ODF3L2Q3SX64 289 aa11.19□□□□□ -0.62
CLN8-209ENST00000635970 ANAPC13Q9BS18 74 aa11.19□□□□□ -0.62
CLN8-209ENST00000635970 SPANXA1Q9NS26 97 aa11.19□□□□□ -0.62
CLN8-209ENST00000635970 C19orf73Q9NVV2 129 aa11.19□□□□□ -0.62
CLN8-209ENST00000635970 IGLV4-3A0A075B6K6 122 aa11.18□□□□□ -0.62
CLN8-209ENST00000635970 TRGV11A0A075B6L2 103 aa11.18□□□□□ -0.62
CLN8-209ENST00000635970 A0A0J9YXY3 114 aa11.18□□□□□ -0.62
CLN8-209ENST00000635970 TRBV10-2A0A0K0K1G8 114 aa11.18□□□□□ -0.62
CLN8-209ENST00000635970 IGHV4-30-4P0DP06 118 aa11.18□□□□□ -0.62
CLN8-209ENST00000635970 LINC01620Q4KN68 170 aa11.18□□□□□ -0.62
CLN8-209ENST00000635970 MRPS36P82909 103 aaKnown RBP11.17□□□□□ -0.62
CLN8-209ENST00000635970 CLUHP3Q96NS8 147 aa11.17□□□□□ -0.62
CLN8-209ENST00000635970 SPANXDQ9BXN6 97 aa11.17□□□□□ -0.62
CLN8-209ENST00000635970 SPANXCQ9NY87 97 aa11.17□□□□□ -0.62
CLN8-209ENST00000635970 SNCGO76070 127 aa11.17□□□□□ -0.62
CLN8-209ENST00000635970 COL7A1Q02388 2944 aa11.17□□□□□ -0.62
CLN8-209ENST00000635970 Q1RN00 199 aa11.16□□□□□ -0.62
CLN8-209ENST00000635970 K7EQG2 157 aa11.16□□□□□ -0.62
CLN8-209ENST00000635970 EIF4EBP3O60516 100 aaPredicted RBP11.16□□□□□ -0.62
CLN8-209ENST00000635970 COX6CP09669 75 aa11.16□□□□□ -0.62
CLN8-209ENST00000635970 GAGE2BQ13066 116 aa11.16□□□□□ -0.62
CLN8-209ENST00000635970 MRPL23Q16540 153 aaKnown RBP11.16□□□□□ -0.62
CLN8-209ENST00000635970 GAGE2EQ4V326 116 aa11.16□□□□□ -0.62
CLN8-209ENST00000635970 TIMM21Q9BVV7 248 aa11.16□□□□□ -0.62
CLN8-209ENST00000635970 MAP6D1Q9H9H5 199 aa11.16□□□□□ -0.62
CLN8-209ENST00000635970 GAGE2DQ9UEU5 116 aa11.16□□□□□ -0.62
CLN8-209ENST00000635970 A0A0J9YXV3 536 aa11.15□□□□□ -0.62
CLN8-209ENST00000635970 IGHV3-30-3P0DP02 117 aa11.15□□□□□ -0.62
CLN8-209ENST00000635970 PIK3CD-AS1Q5SR53 167 aa11.15□□□□□ -0.62
CLN8-209ENST00000635970 DNAH9Q9NYC9 4486 aa11.15□□□□□ -0.62
CLN8-209ENST00000635970 IGHV1-58A0A0C4DH39 117 aa11.14□□□□□ -0.63
CLN8-209ENST00000635970 H3BT86 120 aa11.14□□□□□ -0.63
CLN8-209ENST00000635970 GAGE5Q13069 117 aa11.14□□□□□ -0.63
CLN8-209ENST00000635970 GAGE6Q13070 117 aa11.14□□□□□ -0.63
CLN8-209ENST00000635970 OPRPNQ99935 248 aaPredicted RBP11.14□□□□□ -0.63
CLN8-209ENST00000635970 NTN5Q8WTR8 489 aaPredicted RBP11.14□□□□□ -0.63
CLN8-209ENST00000635970 TGP01266 2768 aa11.13□□□□□ -0.63
CLN8-209ENST00000635970 TIMM17BO60830 172 aa11.13□□□□□ -0.63
CLN8-209ENST00000635970 DEFB131AP59861 70 aa11.13□□□□□ -0.63
CLN8-209ENST00000635970 LITAFQ99732 161 aa11.13□□□□□ -0.63
CLN8-209ENST00000635970 TRAV8-4A0A0B4J246 113 aa11.12□□□□□ -0.63
CLN8-209ENST00000635970 TINCRA0A1B0GVN0 87 aa11.12□□□□□ -0.63
CLN8-209ENST00000635970 DEFB104AQ8WTQ1 72 aa11.12□□□□□ -0.63
CLN8-209ENST00000635970 RBMY1BA6NDE4 496 aaKnown RBP11.12□□□□□ -0.63
CLN8-209ENST00000635970 RBMY1EA6NEQ0 496 aaKnown RBP11.12□□□□□ -0.63
CLN8-209ENST00000635970 A8MZ25 164 aa11.12□□□□□ -0.63
CLN8-209ENST00000635970 H3BMM0 161 aa11.12□□□□□ -0.63
CLN8-209ENST00000635970 RBMY1DP0C7P1 496 aaKnown RBP11.12□□□□□ -0.63
CLN8-209ENST00000635970 IFITM1P13164 125 aa11.12□□□□□ -0.63
CLN8-209ENST00000635970 UBE2WQ96B02 151 aa11.12□□□□□ -0.63
CLN8-209ENST00000635970 H7C2G1 150 aa11.11□□□□□ -0.63
CLN8-209ENST00000635970 TRIAP1O43715 76 aa11.11□□□□□ -0.63
CLN8-209ENST00000635970 MIAQ16674 131 aa11.11□□□□□ -0.63
CLN8-209ENST00000635970 B9D2Q9BPU9 175 aa11.11□□□□□ -0.63
CLN8-209ENST00000635970 FAM110AQ9BQ89 295 aa11.11□□□□□ -0.63
CLN8-209ENST00000635970 SPXQ9BT56 116 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 268.2 ms