RNA–Protein interactions for RNA: ENST00000635675.2

LINC00339-210, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-210ENST00000635675 TM2D2Q9BX73 214 aa6.49□□□□□ -1.37
LINC00339-210ENST00000635675 LRCOL1A6NCL2 159 aa6.48□□□□□ -1.37
LINC00339-210ENST00000635675 TCAPO15273 167 aa6.48□□□□□ -1.37
LINC00339-210ENST00000635675 HSBP1O75506 76 aa6.48□□□□□ -1.37
LINC00339-210ENST00000635675 ANGP03950 147 aaKnown RBP6.48□□□□□ -1.37
LINC00339-210ENST00000635675 ESDP10768 282 aa6.48□□□□□ -1.37
LINC00339-210ENST00000635675 FABP4P15090 132 aa6.48□□□□□ -1.37
LINC00339-210ENST00000635675 C20orf78Q9BR46 151 aa6.48□□□□□ -1.37
LINC00339-210ENST00000635675 PRR34Q9NV39 138 aa6.48□□□□□ -1.37
LINC00339-210ENST00000635675 IGLV4-60A0A075B6I1 120 aa6.47□□□□□ -1.37
LINC00339-210ENST00000635675 H7C423 109 aa6.47□□□□□ -1.37
LINC00339-210ENST00000635675 UBE2L6O14933 153 aa6.47□□□□□ -1.37
LINC00339-210ENST00000635675 PSCAO43653 123 aa6.47□□□□□ -1.37
LINC00339-210ENST00000635675 KRTAP10-2P60368 255 aa6.47□□□□□ -1.37
LINC00339-210ENST00000635675 RPL32P62910 135 aaKnown RBP6.47□□□□□ -1.37
LINC00339-210ENST00000635675 SPATA12Q7Z6I5 190 aa6.47□□□□□ -1.37
LINC00339-210ENST00000635675 LINC00269Q8N2A0 174 aa6.47□□□□□ -1.37
LINC00339-210ENST00000635675 MAPKAPK5-AS1Q8N8E1 139 aa6.47□□□□□ -1.37
LINC00339-210ENST00000635675 C20orf203Q8NBC4 194 aa6.47□□□□□ -1.37
LINC00339-210ENST00000635675 RMI2Q96E14 147 aa6.47□□□□□ -1.37
LINC00339-210ENST00000635675 SMIM2Q9BVW6 85 aa6.47□□□□□ -1.37
LINC00339-210ENST00000635675 COX11Q9Y6N1 276 aa6.47□□□□□ -1.37
LINC00339-210ENST00000635675 IGKV2D-24A0A075B6R9 120 aa6.46□□□□□ -1.38
LINC00339-210ENST00000635675 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.46□□□□□ -1.38
LINC00339-210ENST00000635675 IGKV2-29A2NJV5 120 aaPredicted RBP6.46□□□□□ -1.38
LINC00339-210ENST00000635675 IFITM10A6NMD0 228 aa6.46□□□□□ -1.38
LINC00339-210ENST00000635675 EREGO14944 169 aa6.46□□□□□ -1.38
LINC00339-210ENST00000635675 LINC00614P0C842 121 aa6.46□□□□□ -1.38
LINC00339-210ENST00000635675 MIAQ16674 131 aa6.46□□□□□ -1.38
LINC00339-210ENST00000635675 COA6Q5JTJ3 125 aaKnown RBP6.46□□□□□ -1.38
LINC00339-210ENST00000635675 Q8N8P6 123 aa6.46□□□□□ -1.38
LINC00339-210ENST00000635675 LAMTOR2Q9Y2Q5 125 aa6.46□□□□□ -1.38
LINC00339-210ENST00000635675 BIRC6Q9NR09 4857 aa6.45□□□□□ -1.38
LINC00339-210ENST00000635675 CRPP02741 224 aa6.45□□□□□ -1.38
LINC00339-210ENST00000635675 FGF6P10767 208 aa6.45□□□□□ -1.38
LINC00339-210ENST00000635675 REG3AQ06141 175 aa6.45□□□□□ -1.38
LINC00339-210ENST00000635675 KIR2DL4Q99706 377 aa6.45□□□□□ -1.38
LINC00339-210ENST00000635675 PKHD1P08F94 4074 aa6.44□□□□□ -1.38
LINC00339-210ENST00000635675 PRSS47A8MTI9 375 aa6.44□□□□□ -1.38
LINC00339-210ENST00000635675 FCER1GP30273 86 aa6.44□□□□□ -1.38
LINC00339-210ENST00000635675 WFDC2Q14508 124 aa6.44□□□□□ -1.38
LINC00339-210ENST00000635675 CLPSL2Q6UWE3 100 aa6.44□□□□□ -1.38
LINC00339-210ENST00000635675 OR10D4PQ8NGN7 298 aa6.44□□□□□ -1.38
LINC00339-210ENST00000635675 TMEM18Q96B42 140 aa6.44□□□□□ -1.38
LINC00339-210ENST00000635675 CHCHD1Q96BP2 118 aaKnown RBP6.44□□□□□ -1.38
LINC00339-210ENST00000635675 HIST1H2BLQ99880 126 aa6.44□□□□□ -1.38
LINC00339-210ENST00000635675 C1orf43Q9BWL3 253 aa6.44□□□□□ -1.38
LINC00339-210ENST00000635675 NXT2Q9NPJ8 142 aaKnown RBP6.44□□□□□ -1.38
LINC00339-210ENST00000635675 AP5S1Q9NUS5 200 aa6.44□□□□□ -1.38
LINC00339-210ENST00000635675 PGPEP1Q9NXJ5 209 aa6.44□□□□□ -1.38
LINC00339-210ENST00000635675 H0Y8G0 127 aa6.43□□□□□ -1.38
LINC00339-210ENST00000635675 ZNF25P17030 456 aaPredicted RBP6.43□□□□□ -1.38
LINC00339-210ENST00000635675 AMMECR1LQ6DCA0 310 aa6.43□□□□□ -1.38
LINC00339-210ENST00000635675 KRTAP26-1Q6PEX3 210 aa6.43□□□□□ -1.38
LINC00339-210ENST00000635675 LINC00173Q6ZV60 143 aa6.43□□□□□ -1.38
LINC00339-210ENST00000635675 MRPL52Q86TS9 123 aaKnown RBP6.43□□□□□ -1.38
LINC00339-210ENST00000635675 BAALCQ8WXS3 180 aa6.43□□□□□ -1.38
LINC00339-210ENST00000635675 PACRGQ96M98 296 aaPredicted RBP6.43□□□□□ -1.38
LINC00339-210ENST00000635675 TRAV8-4A0A0B4J246 113 aa6.42□□□□□ -1.38
LINC00339-210ENST00000635675 C16orf90A8MZG2 172 aa6.42□□□□□ -1.38
LINC00339-210ENST00000635675 FUSP35637 526 aaKnown RBP eCLIP6.42□□□□□ -1.38
LINC00339-210ENST00000635675 Q8N814 137 aa6.42□□□□□ -1.38
LINC00339-210ENST00000635675 DNAH11Q96DT5 4516 aa6.42□□□□□ -1.38
LINC00339-210ENST00000635675 IGLV10-54A0A075B6I4 117 aa6.42□□□□□ -1.38
LINC00339-210ENST00000635675 LECT2O14960 151 aa6.42□□□□□ -1.38
LINC00339-210ENST00000635675 HBDP02042 147 aa6.42□□□□□ -1.38
LINC00339-210ENST00000635675 KRTDAPP60985 99 aa6.42□□□□□ -1.38
LINC00339-210ENST00000635675 CDPF1Q6NVV7 123 aa6.42□□□□□ -1.38
LINC00339-210ENST00000635675 OR5A1Q8NGJ0 315 aa6.42□□□□□ -1.38
LINC00339-210ENST00000635675 CSDC2Q9Y534 153 aaKnown RBP6.42□□□□□ -1.38
LINC00339-210ENST00000635675 A0A096LNJ9 63 aa6.41□□□□□ -1.38
LINC00339-210ENST00000635675 NTN5Q8WTR8 489 aaPredicted RBP6.41□□□□□ -1.38
LINC00339-210ENST00000635675 TMEM101Q96IK0 257 aa6.41□□□□□ -1.38
LINC00339-210ENST00000635675 CDC42SE2Q9NRR3 84 aa6.41□□□□□ -1.38
LINC00339-210ENST00000635675 UBE2D4Q9Y2X8 147 aa6.41□□□□□ -1.38
LINC00339-210ENST00000635675 LEPROTL1O95214 131 aa6.4□□□□□ -1.39
LINC00339-210ENST00000635675 RPL39P62891 51 aaKnown RBP6.4□□□□□ -1.39
LINC00339-210ENST00000635675 ORMDL2Q53FV1 153 aa6.4□□□□□ -1.39
LINC00339-210ENST00000635675 ZNF664Q8N3J9 261 aa6.4□□□□□ -1.39
LINC00339-210ENST00000635675 TIMM21Q9BVV7 248 aa6.4□□□□□ -1.39
LINC00339-210ENST00000635675 IGKV3OR2-268A0A0C4DH90 116 aa6.39□□□□□ -1.39
LINC00339-210ENST00000635675 SMAGPQ0VAQ4 97 aa6.39□□□□□ -1.39
LINC00339-210ENST00000635675 DGAT2L7PQ6IED9 249 aa6.39□□□□□ -1.39
LINC00339-210ENST00000635675 C2orf66Q6UXQ4 117 aa6.39□□□□□ -1.39
LINC00339-210ENST00000635675 FAM104AQ969W3 186 aa6.39□□□□□ -1.39
LINC00339-210ENST00000635675 IGLV5-52A0A0A0MRZ9 124 aa6.38□□□□□ -1.39
LINC00339-210ENST00000635675 LINC01546A6NGU7 62 aa6.38□□□□□ -1.39
LINC00339-210ENST00000635675 USP17L23D6RBM5 183 aa6.38□□□□□ -1.39
LINC00339-210ENST00000635675 C3orf79P0CE67 100 aa6.38□□□□□ -1.39
LINC00339-210ENST00000635675 LINC00959A0A1B0GUT2 108 aa6.37□□□□□ -1.39
LINC00339-210ENST00000635675 GAGE12HA6NDE8 117 aa6.37□□□□□ -1.39
LINC00339-210ENST00000635675 K7EMI3 77 aa6.37□□□□□ -1.39
LINC00339-210ENST00000635675 SCGB1D1O95968 90 aa6.37□□□□□ -1.39
LINC00339-210ENST00000635675 GCSHP23434 173 aa6.37□□□□□ -1.39
LINC00339-210ENST00000635675 KRTAP10-1P60331 282 aa6.37□□□□□ -1.39
LINC00339-210ENST00000635675 CHCHD10Q8WYQ3 142 aaPredicted RBP6.37□□□□□ -1.39
LINC00339-210ENST00000635675 SCGB3A1Q96QR1 104 aa6.37□□□□□ -1.39
LINC00339-210ENST00000635675 PMCHL2Q9BQD1 86 aa6.37□□□□□ -1.39
LINC00339-210ENST00000635675 SPANXA1Q9NS26 97 aa6.37□□□□□ -1.39
LINC00339-210ENST00000635675 HSPB8Q9UJY1 196 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 215.6 ms