RNA–Protein interactions for RNA: ENST00000634363.1

SNRNP48-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 781 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-203ENST00000634363 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.24□□□□□ -0.77
SNRNP48-203ENST00000634363 IGKV2-29A2NJV5 120 aaPredicted RBP10.24□□□□□ -0.77
SNRNP48-203ENST00000634363 H7C423 109 aa10.24□□□□□ -0.77
SNRNP48-203ENST00000634363 PHOX2AO14813 284 aa10.24□□□□□ -0.77
SNRNP48-203ENST00000634363 SNAPINO95295 136 aa10.24□□□□□ -0.77
SNRNP48-203ENST00000634363 MIAQ16674 131 aa10.24□□□□□ -0.77
SNRNP48-203ENST00000634363 RNASEKQ6P5S7 137 aaKnown RBP10.24□□□□□ -0.77
SNRNP48-203ENST00000634363 TMEM136Q6ZRR5 245 aa10.24□□□□□ -0.77
SNRNP48-203ENST00000634363 LINC00269Q8N2A0 174 aa10.24□□□□□ -0.77
SNRNP48-203ENST00000634363 KRTAP29-1A8MX34 341 aaPredicted RBP10.23□□□□□ -0.77
SNRNP48-203ENST00000634363 NPYP01303 97 aa10.23□□□□□ -0.77
SNRNP48-203ENST00000634363 ENHOQ6UWT2 76 aa10.23□□□□□ -0.77
SNRNP48-203ENST00000634363 C20orf203Q8NBC4 194 aa10.23□□□□□ -0.77
SNRNP48-203ENST00000634363 BAALCQ8WXS3 180 aa10.23□□□□□ -0.77
SNRNP48-203ENST00000634363 PRELID3AQ96N28 172 aa10.23□□□□□ -0.77
SNRNP48-203ENST00000634363 VPS13BQ7Z7G8 4022 aa10.22□□□□□ -0.77
SNRNP48-203ENST00000634363 MYCBP2O75592 4640 aa10.22□□□□□ -0.77
SNRNP48-203ENST00000634363 IGLV4-60A0A075B6I1 120 aa10.22□□□□□ -0.77
SNRNP48-203ENST00000634363 TCAPO15273 167 aa10.22□□□□□ -0.77
SNRNP48-203ENST00000634363 FGF6P10767 208 aa10.22□□□□□ -0.77
SNRNP48-203ENST00000634363 RPL32P62910 135 aaKnown RBP10.22□□□□□ -0.77
SNRNP48-203ENST00000634363 REG3AQ06141 175 aa10.22□□□□□ -0.77
SNRNP48-203ENST00000634363 Q6ZSA8 131 aa10.22□□□□□ -0.77
SNRNP48-203ENST00000634363 SMIM2Q9BVW6 85 aa10.22□□□□□ -0.77
SNRNP48-203ENST00000634363 PRR34Q9NV39 138 aa10.22□□□□□ -0.77
SNRNP48-203ENST00000634363 LAMTOR2Q9Y2Q5 125 aa10.22□□□□□ -0.77
SNRNP48-203ENST00000634363 ESDP10768 282 aa10.21□□□□□ -0.77
SNRNP48-203ENST00000634363 ZNF25P17030 456 aaPredicted RBP10.21□□□□□ -0.77
SNRNP48-203ENST00000634363 TMEM101Q96IK0 257 aa10.21□□□□□ -0.77
SNRNP48-203ENST00000634363 SMAGPQ0VAQ4 97 aa10.2□□□□□ -0.78
SNRNP48-203ENST00000634363 MAP1LC3AQ9H492 121 aa10.2□□□□□ -0.78
SNRNP48-203ENST00000634363 HLA-DQA1P01909 254 aa10.19□□□□□ -0.78
SNRNP48-203ENST00000634363 COX19Q49B96 90 aa10.19□□□□□ -0.78
SNRNP48-203ENST00000634363 SCXQ7RTU7 201 aa10.19□□□□□ -0.78
SNRNP48-203ENST00000634363 OR5A1Q8NGJ0 315 aa10.19□□□□□ -0.78
SNRNP48-203ENST00000634363 TMEM18Q96B42 140 aa10.19□□□□□ -0.78
SNRNP48-203ENST00000634363 TRAV8-4A0A0B4J246 113 aa10.18□□□□□ -0.78
SNRNP48-203ENST00000634363 IGLV10-54A0A075B6I4 117 aa10.17□□□□□ -0.78
SNRNP48-203ENST00000634363 IGKV3OR2-268A0A0C4DH90 116 aa10.17□□□□□ -0.78
SNRNP48-203ENST00000634363 RAB5AP20339 215 aa10.17□□□□□ -0.78
SNRNP48-203ENST00000634363 SERTAD4-AS1Q5TG53 156 aa10.17□□□□□ -0.78
SNRNP48-203ENST00000634363 DGAT2L7PQ6IED9 249 aa10.17□□□□□ -0.78
SNRNP48-203ENST00000634363 MRPL52Q86TS9 123 aaKnown RBP10.17□□□□□ -0.78
SNRNP48-203ENST00000634363 GNB1LQ9BYB4 327 aa10.17□□□□□ -0.78
SNRNP48-203ENST00000634363 LOC389332A0A1B0GUA5 103 aa10.16□□□□□ -0.78
SNRNP48-203ENST00000634363 MT-ND6P03923 174 aa10.16□□□□□ -0.78
SNRNP48-203ENST00000634363 SLC7A5P1Q8MH63 180 aa10.16□□□□□ -0.78
SNRNP48-203ENST00000634363 KIAA1644Q3SXP7 199 aa10.15□□□□□ -0.78
SNRNP48-203ENST00000634363 CHAC1Q9BUX1 264 aa10.15□□□□□ -0.78
SNRNP48-203ENST00000634363 PRSS47A8MTI9 375 aa10.14□□□□□ -0.79
SNRNP48-203ENST00000634363 TGIF2-C20orf24A0A0A6YYL0 155 aa10.13□□□□□ -0.79
SNRNP48-203ENST00000634363 C14orf177Q52M58 125 aa10.13□□□□□ -0.79
SNRNP48-203ENST00000634363 ZNF664Q8N3J9 261 aa10.13□□□□□ -0.79
SNRNP48-203ENST00000634363 Q8N8P6 123 aa10.13□□□□□ -0.79
SNRNP48-203ENST00000634363 CIRBP-AS1Q8TBR5 109 aa10.13□□□□□ -0.79
SNRNP48-203ENST00000634363 MRPL18Q9H0U6 180 aaKnown RBP10.13□□□□□ -0.79
SNRNP48-203ENST00000634363 UBE2D4Q9Y2X8 147 aa10.13□□□□□ -0.79
SNRNP48-203ENST00000634363 CSDC2Q9Y534 153 aaKnown RBP10.13□□□□□ -0.79
SNRNP48-203ENST00000634363 FABP9Q0Z7S8 132 aa10.12□□□□□ -0.79
SNRNP48-203ENST00000634363 TIMM21Q9BVV7 248 aa10.12□□□□□ -0.79
SNRNP48-203ENST00000634363 NXT2Q9NPJ8 142 aaKnown RBP10.12□□□□□ -0.79
SNRNP48-203ENST00000634363 CDC42SE2Q9NRR3 84 aa10.12□□□□□ -0.79
SNRNP48-203ENST00000634363 RPL39P62891 51 aaKnown RBP10.11□□□□□ -0.79
SNRNP48-203ENST00000634363 KRTAP26-1Q6PEX3 210 aa10.11□□□□□ -0.79
SNRNP48-203ENST00000634363 SPANXA1Q9NS26 97 aa10.11□□□□□ -0.79
SNRNP48-203ENST00000634363 GAGE12HA6NDE8 117 aa10.1□□□□□ -0.79
SNRNP48-203ENST00000634363 USP17L23D6RBM5 183 aa10.1□□□□□ -0.79
SNRNP48-203ENST00000634363 K7EMI3 77 aa10.1□□□□□ -0.79
SNRNP48-203ENST00000634363 OXTP01178 125 aa10.1□□□□□ -0.79
SNRNP48-203ENST00000634363 KRTAP10-4P60372 401 aaPredicted RBP10.1□□□□□ -0.79
SNRNP48-203ENST00000634363 ORMDL2Q53FV1 153 aa10.1□□□□□ -0.79
SNRNP48-203ENST00000634363 CHCHD10Q8WYQ3 142 aaPredicted RBP10.1□□□□□ -0.79
SNRNP48-203ENST00000634363 TRAPPC1Q9Y5R8 145 aa10.1□□□□□ -0.79
SNRNP48-203ENST00000634363 IFI27P40305 119 aaPredicted RBP10.09□□□□□ -0.79
SNRNP48-203ENST00000634363 SS18Q15532 418 aa10.09□□□□□ -0.79
SNRNP48-203ENST00000634363 Q6ZUT4 128 aa10.09□□□□□ -0.79
SNRNP48-203ENST00000634363 PLA2G2DQ9UNK4 145 aa10.09□□□□□ -0.79
SNRNP48-203ENST00000634363 LINC00959A0A1B0GUT2 108 aa10.08□□□□□ -0.8
SNRNP48-203ENST00000634363 XCL1P47992 114 aa10.08□□□□□ -0.8
SNRNP48-203ENST00000634363 RNASE13Q5GAN3 156 aaKnown RBP10.08□□□□□ -0.8
SNRNP48-203ENST00000634363 PRSS3P2Q8NHM4 247 aa10.08□□□□□ -0.8
SNRNP48-203ENST00000634363 ALKBH7Q9BT30 221 aaPredicted RBP10.08□□□□□ -0.8
SNRNP48-203ENST00000634363 SMCO4Q9NRQ5 59 aa10.08□□□□□ -0.8
SNRNP48-203ENST00000634363 CYSLTR1Q9Y271 337 aa10.08□□□□□ -0.8
SNRNP48-203ENST00000634363 CCL25O15444 150 aa10.07□□□□□ -0.8
SNRNP48-203ENST00000634363 G0S2P27469 103 aa10.07□□□□□ -0.8
SNRNP48-203ENST00000634363 TRAV13-1A0A0B4J241 112 aa10.06□□□□□ -0.8
SNRNP48-203ENST00000634363 MRPS36P82909 103 aaKnown RBP10.06□□□□□ -0.8
SNRNP48-203ENST00000634363 CFAP161Q6P656 301 aa10.06□□□□□ -0.8
SNRNP48-203ENST00000634363 CBLN2Q8IUK8 224 aa10.06□□□□□ -0.8
SNRNP48-203ENST00000634363 C1orf196B1AJZ1 125 aa10.05□□□□□ -0.8
SNRNP48-203ENST00000634363 RPL37AP61513 92 aaKnown RBP10.05□□□□□ -0.8
SNRNP48-203ENST00000634363 C2orf66Q6UXQ4 117 aa10.05□□□□□ -0.8
SNRNP48-203ENST00000634363 hDV102S1A0JD36 115 aa10.04□□□□□ -0.8
SNRNP48-203ENST00000634363 PRSS1P07477 247 aa10.04□□□□□ -0.8
SNRNP48-203ENST00000634363 FOXI1Q12951 378 aa10.04□□□□□ -0.8
SNRNP48-203ENST00000634363 FA2HQ7L5A8 372 aa10.04□□□□□ -0.8
SNRNP48-203ENST00000634363 YPEL4Q96NS1 127 aa10.04□□□□□ -0.8
SNRNP48-203ENST00000634363 KRTAP3-3Q9BYR6 98 aa10.04□□□□□ -0.8
SNRNP48-203ENST00000634363 KRTAP3-2Q9BYR7 98 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms