RNA–Protein interactions for RNA: ENST00000629570.1

LINC00550-202, long intergenic non-protein coding RNA 550, humanhuman

TSL 3

Gene LINC00550, Length 317 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-202ENST00000629570 ENHOQ6UWT2 76 aa3.69□□□□□ -1.82
LINC00550-202ENST00000629570 TMEM136Q6ZRR5 245 aa3.69□□□□□ -1.82
LINC00550-202ENST00000629570 ORMDL3Q8N138 153 aa3.69□□□□□ -1.82
LINC00550-202ENST00000629570 LINC00269Q8N2A0 174 aa3.69□□□□□ -1.82
LINC00550-202ENST00000629570 SVBPQ8N300 66 aa3.69□□□□□ -1.82
LINC00550-202ENST00000629570 MAPKAPK5-AS1Q8N8E1 139 aa3.69□□□□□ -1.82
LINC00550-202ENST00000629570 C20orf203Q8NBC4 194 aa3.69□□□□□ -1.82
LINC00550-202ENST00000629570 PRR34Q9NV39 138 aa3.69□□□□□ -1.82
LINC00550-202ENST00000629570 IGKV2D-24A0A075B6R9 120 aa3.68□□□□□ -1.82
LINC00550-202ENST00000629570 TRAV9-1A0A075B6T8 112 aa3.68□□□□□ -1.82
LINC00550-202ENST00000629570 A0A1B0GUV1 79 aa3.68□□□□□ -1.82
LINC00550-202ENST00000629570 LRCOL1A6NCL2 159 aa3.68□□□□□ -1.82
LINC00550-202ENST00000629570 VCYO14598 125 aa3.68□□□□□ -1.82
LINC00550-202ENST00000629570 LECT2O14960 151 aa3.68□□□□□ -1.82
LINC00550-202ENST00000629570 SNAPINO95295 136 aa3.68□□□□□ -1.82
LINC00550-202ENST00000629570 CRPP02741 224 aa3.68□□□□□ -1.82
LINC00550-202ENST00000629570 PPBPP02775 128 aa3.68□□□□□ -1.82
LINC00550-202ENST00000629570 FGF6P10767 208 aa3.68□□□□□ -1.82
LINC00550-202ENST00000629570 ESDP10768 282 aa3.68□□□□□ -1.82
LINC00550-202ENST00000629570 S100PP25815 95 aa3.68□□□□□ -1.82
LINC00550-202ENST00000629570 REG3AQ06141 175 aa3.68□□□□□ -1.82
LINC00550-202ENST00000629570 ELOBQ15370 118 aa3.68□□□□□ -1.82
LINC00550-202ENST00000629570 SPATA12Q7Z6I5 190 aa3.68□□□□□ -1.82
LINC00550-202ENST00000629570 PRELID3AQ96N28 172 aa3.68□□□□□ -1.82
LINC00550-202ENST00000629570 C20orf78Q9BR46 151 aa3.68□□□□□ -1.82
LINC00550-202ENST00000629570 SMIM2Q9BVW6 85 aa3.68□□□□□ -1.82
LINC00550-202ENST00000629570 IGLV10-54A0A075B6I4 117 aa3.67□□□□□ -1.82
LINC00550-202ENST00000629570 TGIF2-C20orf24A0A0A6YYL0 155 aa3.67□□□□□ -1.82
LINC00550-202ENST00000629570 PHOX2AO14813 284 aa3.67□□□□□ -1.82
LINC00550-202ENST00000629570 TCAPO15273 167 aa3.67□□□□□ -1.82
LINC00550-202ENST00000629570 FCER1GP30273 86 aa3.67□□□□□ -1.82
LINC00550-202ENST00000629570 RPL32P62910 135 aaKnown RBP3.67□□□□□ -1.82
LINC00550-202ENST00000629570 Q0VG73 95 aa3.67□□□□□ -1.82
LINC00550-202ENST00000629570 MIAQ16674 131 aa3.67□□□□□ -1.82
LINC00550-202ENST00000629570 RNF151Q2KHN1 245 aa3.67□□□□□ -1.82
LINC00550-202ENST00000629570 KIAA1644Q3SXP7 199 aa3.67□□□□□ -1.82
LINC00550-202ENST00000629570 AMMECR1LQ6DCA0 310 aa3.67□□□□□ -1.82
LINC00550-202ENST00000629570 RNASEKQ6P5S7 137 aaKnown RBP3.67□□□□□ -1.82
LINC00550-202ENST00000629570 KIR2DL4Q99706 377 aa3.67□□□□□ -1.82
LINC00550-202ENST00000629570 C1orf43Q9BWL3 253 aa3.67□□□□□ -1.82
LINC00550-202ENST00000629570 TM2D2Q9BX73 214 aa3.67□□□□□ -1.82
LINC00550-202ENST00000629570 DYNC1H1Q14204 4646 aaKnown RBP3.67□□□□□ -1.82
LINC00550-202ENST00000629570 IGKV3OR2-268A0A0C4DH90 116 aa3.66□□□□□ -1.82
LINC00550-202ENST00000629570 LOC389332A0A1B0GUA5 103 aa3.66□□□□□ -1.82
LINC00550-202ENST00000629570 C16orf90A8MZG2 172 aa3.66□□□□□ -1.82
LINC00550-202ENST00000629570 H7C423 109 aa3.66□□□□□ -1.82
LINC00550-202ENST00000629570 HLA-DQA1P01909 254 aa3.66□□□□□ -1.82
LINC00550-202ENST00000629570 RPL39P62891 51 aaKnown RBP3.66□□□□□ -1.82
LINC00550-202ENST00000629570 KRTAP15-1Q3LI76 137 aa3.66□□□□□ -1.82
LINC00550-202ENST00000629570 KRTAP26-1Q6PEX3 210 aa3.66□□□□□ -1.82
LINC00550-202ENST00000629570 MRPL52Q86TS9 123 aaKnown RBP3.66□□□□□ -1.82
LINC00550-202ENST00000629570 CBLN2Q8IUK8 224 aa3.66□□□□□ -1.82
LINC00550-202ENST00000629570 Q8N814 137 aa3.66□□□□□ -1.82
LINC00550-202ENST00000629570 OR5A1Q8NGJ0 315 aa3.66□□□□□ -1.82
LINC00550-202ENST00000629570 BAALCQ8WXS3 180 aa3.66□□□□□ -1.82
LINC00550-202ENST00000629570 RMI2Q96E14 147 aa3.66□□□□□ -1.82
LINC00550-202ENST00000629570 GNB1LQ9BYB4 327 aa3.66□□□□□ -1.82
LINC00550-202ENST00000629570 MAP1LC3AQ9H492 121 aa3.66□□□□□ -1.82
LINC00550-202ENST00000629570 LAMTOR2Q9Y2Q5 125 aa3.66□□□□□ -1.82
LINC00550-202ENST00000629570 UBE2D4Q9Y2X8 147 aa3.66□□□□□ -1.82
LINC00550-202ENST00000629570 ZNF25P17030 456 aaPredicted RBP3.65□□□□□ -1.83
LINC00550-202ENST00000629570 RNASE13Q5GAN3 156 aaKnown RBP3.65□□□□□ -1.83
LINC00550-202ENST00000629570 Q6ZUT4 128 aa3.65□□□□□ -1.83
LINC00550-202ENST00000629570 YPEL4Q96NS1 127 aa3.65□□□□□ -1.83
LINC00550-202ENST00000629570 COX11Q9Y6N1 276 aa3.65□□□□□ -1.83
LINC00550-202ENST00000629570 DNAH5Q8TE73 4624 aa3.65□□□□□ -1.83
LINC00550-202ENST00000629570 LRP1BQ9NZR2 4599 aa3.65□□□□□ -1.83
LINC00550-202ENST00000629570 RYR1P21817 5038 aa3.65□□□□□ -1.83
LINC00550-202ENST00000629570 HERC2O95714 4834 aa3.64□□□□□ -1.83
LINC00550-202ENST00000629570 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.64□□□□□ -1.83
LINC00550-202ENST00000629570 TRAV8-4A0A0B4J246 113 aa3.64□□□□□ -1.83
LINC00550-202ENST00000629570 PRSS47A8MTI9 375 aa3.64□□□□□ -1.83
LINC00550-202ENST00000629570 USP17L23D6RBM5 183 aa3.64□□□□□ -1.83
LINC00550-202ENST00000629570 MT-ND6P03923 174 aa3.64□□□□□ -1.83
LINC00550-202ENST00000629570 RAB5AP20339 215 aa3.64□□□□□ -1.83
LINC00550-202ENST00000629570 IFI27P40305 119 aaPredicted RBP3.64□□□□□ -1.83
LINC00550-202ENST00000629570 FABP9Q0Z7S8 132 aa3.64□□□□□ -1.83
LINC00550-202ENST00000629570 ZNF664Q8N3J9 261 aa3.64□□□□□ -1.83
LINC00550-202ENST00000629570 Q8N8P6 123 aa3.64□□□□□ -1.83
LINC00550-202ENST00000629570 CHCHD10Q8WYQ3 142 aaPredicted RBP3.64□□□□□ -1.83
LINC00550-202ENST00000629570 FAM104AQ969W3 186 aa3.64□□□□□ -1.83
LINC00550-202ENST00000629570 TMEM101Q96IK0 257 aa3.64□□□□□ -1.83
LINC00550-202ENST00000629570 OPRPNQ99935 248 aaPredicted RBP3.64□□□□□ -1.83
LINC00550-202ENST00000629570 ALKBH7Q9BT30 221 aaPredicted RBP3.64□□□□□ -1.83
LINC00550-202ENST00000629570 CDC42SE2Q9NRR3 84 aa3.64□□□□□ -1.83
LINC00550-202ENST00000629570 IGLV5-52A0A0A0MRZ9 124 aa3.63□□□□□ -1.83
LINC00550-202ENST00000629570 LINC00959A0A1B0GUT2 108 aa3.63□□□□□ -1.83
LINC00550-202ENST00000629570 GAGE12HA6NDE8 117 aa3.63□□□□□ -1.83
LINC00550-202ENST00000629570 XCL1P47992 114 aa3.63□□□□□ -1.83
LINC00550-202ENST00000629570 KRTAP10-1P60331 282 aa3.63□□□□□ -1.83
LINC00550-202ENST00000629570 COX19Q49B96 90 aa3.63□□□□□ -1.83
LINC00550-202ENST00000629570 LINC01620Q4KN68 170 aa3.63□□□□□ -1.83
LINC00550-202ENST00000629570 DGAT2L7PQ6IED9 249 aa3.63□□□□□ -1.83
LINC00550-202ENST00000629570 NTN5Q8WTR8 489 aaPredicted RBP3.63□□□□□ -1.83
LINC00550-202ENST00000629570 TMEM18Q96B42 140 aa3.63□□□□□ -1.83
LINC00550-202ENST00000629570 TIMM21Q9BVV7 248 aa3.63□□□□□ -1.83
LINC00550-202ENST00000629570 NXT2Q9NPJ8 142 aaKnown RBP3.63□□□□□ -1.83
LINC00550-202ENST00000629570 SMCO4Q9NRQ5 59 aa3.63□□□□□ -1.83
LINC00550-202ENST00000629570 SPANXA1Q9NS26 97 aa3.63□□□□□ -1.83
LINC00550-202ENST00000629570 CSDC2Q9Y534 153 aaKnown RBP3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms