RNA–Protein interactions for RNA: ENST00000628496.2

SOX2-OT-248, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 801 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-248ENST00000628496 FAM229AH3BQW9 127 aa8.93□□□□□ -0.98
SOX2-OT-248ENST00000628496 HLA-DQA1P01909 254 aa8.93□□□□□ -0.98
SOX2-OT-248ENST00000628496 MRPL52Q86TS9 123 aaKnown RBP8.93□□□□□ -0.98
SOX2-OT-248ENST00000628496 NTN5Q8WTR8 489 aaPredicted RBP8.93□□□□□ -0.98
SOX2-OT-248ENST00000628496 LRP1BQ9NZR2 4599 aa8.93□□□□□ -0.98
SOX2-OT-248ENST00000628496 KIAA1109Q2LD37 5005 aa8.93□□□□□ -0.98
SOX2-OT-248ENST00000628496 IGLV5-52A0A0A0MRZ9 124 aa8.92□□□□□ -0.98
SOX2-OT-248ENST00000628496 TRAV8-4A0A0B4J246 113 aa8.92□□□□□ -0.98
SOX2-OT-248ENST00000628496 IGKV3OR2-268A0A0C4DH90 116 aa8.92□□□□□ -0.98
SOX2-OT-248ENST00000628496 OR5A1Q8NGJ0 315 aa8.92□□□□□ -0.98
SOX2-OT-248ENST00000628496 LAMTOR2Q9Y2Q5 125 aa8.92□□□□□ -0.98
SOX2-OT-248ENST00000628496 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.91□□□□□ -0.98
SOX2-OT-248ENST00000628496 PRSS47A8MTI9 375 aa8.91□□□□□ -0.98
SOX2-OT-248ENST00000628496 TCAPO15273 167 aa8.91□□□□□ -0.98
SOX2-OT-248ENST00000628496 KRTAP10-1P60331 282 aa8.91□□□□□ -0.98
SOX2-OT-248ENST00000628496 SVBPQ8N300 66 aa8.91□□□□□ -0.98
SOX2-OT-248ENST00000628496 TMEM101Q96IK0 257 aa8.91□□□□□ -0.98
SOX2-OT-248ENST00000628496 UBE2D4Q9Y2X8 147 aa8.91□□□□□ -0.98
SOX2-OT-248ENST00000628496 USP17L23D6RBM5 183 aa8.9□□□□□ -0.98
SOX2-OT-248ENST00000628496 NDUFA5Q16718 116 aa8.9□□□□□ -0.98
SOX2-OT-248ENST00000628496 CDC42SE2Q9NRR3 84 aa8.9□□□□□ -0.98
SOX2-OT-248ENST00000628496 LOC389332A0A1B0GUA5 103 aa8.89□□□□□ -0.99
SOX2-OT-248ENST00000628496 CDK2AP2O75956 126 aa8.89□□□□□ -0.99
SOX2-OT-248ENST00000628496 SNAPINO95295 136 aa8.89□□□□□ -0.99
SOX2-OT-248ENST00000628496 GCSHP23434 173 aa8.89□□□□□ -0.99
SOX2-OT-248ENST00000628496 LORP23490 312 aaPredicted RBP8.89□□□□□ -0.99
SOX2-OT-248ENST00000628496 RPL39P62891 51 aaKnown RBP8.89□□□□□ -0.99
SOX2-OT-248ENST00000628496 KIAA1644Q3SXP7 199 aa8.89□□□□□ -0.99
SOX2-OT-248ENST00000628496 ZNF664Q8N3J9 261 aa8.89□□□□□ -0.99
SOX2-OT-248ENST00000628496 GNB1LQ9BYB4 327 aa8.89□□□□□ -0.99
SOX2-OT-248ENST00000628496 MRPL18Q9H0U6 180 aaKnown RBP8.89□□□□□ -0.99
SOX2-OT-248ENST00000628496 MAP1LC3AQ9H492 121 aa8.89□□□□□ -0.99
SOX2-OT-248ENST00000628496 CSDC2Q9Y534 153 aaKnown RBP8.89□□□□□ -0.99
SOX2-OT-248ENST00000628496 HERC2O95714 4834 aa8.88□□□□□ -0.99
SOX2-OT-248ENST00000628496 SLC7A5P1Q8MH63 180 aa8.88□□□□□ -0.99
SOX2-OT-248ENST00000628496 CHCHD10Q8WYQ3 142 aaPredicted RBP8.88□□□□□ -0.99
SOX2-OT-248ENST00000628496 TGIF2-C20orf24A0A0A6YYL0 155 aa8.87□□□□□ -0.99
SOX2-OT-248ENST00000628496 LINC00959A0A1B0GUT2 108 aa8.87□□□□□ -0.99
SOX2-OT-248ENST00000628496 GAGE12HA6NDE8 117 aa8.87□□□□□ -0.99
SOX2-OT-248ENST00000628496 PRSS1P07477 247 aa8.87□□□□□ -0.99
SOX2-OT-248ENST00000628496 C14orf177Q52M58 125 aa8.87□□□□□ -0.99
SOX2-OT-248ENST00000628496 RNASE13Q5GAN3 156 aaKnown RBP8.87□□□□□ -0.99
SOX2-OT-248ENST00000628496 DGAT2L7PQ6IED9 249 aa8.87□□□□□ -0.99
SOX2-OT-248ENST00000628496 Q6ZUT4 128 aa8.87□□□□□ -0.99
SOX2-OT-248ENST00000628496 TMEM18Q96B42 140 aa8.87□□□□□ -0.99
SOX2-OT-248ENST00000628496 TIMM21Q9BVV7 248 aa8.87□□□□□ -0.99
SOX2-OT-248ENST00000628496 RAB5AP20339 215 aa8.86□□□□□ -0.99
SOX2-OT-248ENST00000628496 SMAGPQ0VAQ4 97 aa8.86□□□□□ -0.99
SOX2-OT-248ENST00000628496 Q8N8P6 123 aa8.86□□□□□ -0.99
SOX2-OT-248ENST00000628496 FAM104AQ969W3 186 aa8.86□□□□□ -0.99
SOX2-OT-248ENST00000628496 MT-ND6P03923 174 aa8.85□□□□□ -0.99
SOX2-OT-248ENST00000628496 XCL1P47992 114 aa8.85□□□□□ -0.99
SOX2-OT-248ENST00000628496 FOXI1Q12951 378 aa8.85□□□□□ -0.99
SOX2-OT-248ENST00000628496 COX19Q49B96 90 aa8.85□□□□□ -0.99
SOX2-OT-248ENST00000628496 LINC01620Q4KN68 170 aa8.85□□□□□ -0.99
SOX2-OT-248ENST00000628496 SPANXA1Q9NS26 97 aa8.85□□□□□ -0.99
SOX2-OT-248ENST00000628496 RYR1P21817 5038 aa8.85□□□□□ -0.99
SOX2-OT-248ENST00000628496 CCL25O15444 150 aa8.84□□□□□ -0.99
SOX2-OT-248ENST00000628496 IFI27P40305 119 aaPredicted RBP8.84□□□□□ -0.99
SOX2-OT-248ENST00000628496 OPRPNQ99935 248 aaPredicted RBP8.84□□□□□ -0.99
SOX2-OT-248ENST00000628496 ALKBH7Q9BT30 221 aaPredicted RBP8.84□□□□□ -0.99
SOX2-OT-248ENST00000628496 KRTAP17-1Q9BYP8 105 aa8.84□□□□□ -0.99
SOX2-OT-248ENST00000628496 NXT2Q9NPJ8 142 aaKnown RBP8.84□□□□□ -0.99
SOX2-OT-248ENST00000628496 APOBP04114 4563 aaKnown RBP8.84□□□□□ -0.99
SOX2-OT-248ENST00000628496 XGP55808 180 aa8.83□□□□□ -1
SOX2-OT-248ENST00000628496 SS18Q15532 418 aa8.83□□□□□ -1
SOX2-OT-248ENST00000628496 C15orf56Q8N910 161 aa8.83□□□□□ -1
SOX2-OT-248ENST00000628496 YPEL4Q96NS1 127 aa8.83□□□□□ -1
SOX2-OT-248ENST00000628496 TRAV13-1A0A0B4J241 112 aa8.82□□□□□ -1
SOX2-OT-248ENST00000628496 hDV102S1A0JD36 115 aa8.82□□□□□ -1
SOX2-OT-248ENST00000628496 MRPS36P82909 103 aaKnown RBP8.82□□□□□ -1
SOX2-OT-248ENST00000628496 FABP9Q0Z7S8 132 aa8.82□□□□□ -1
SOX2-OT-248ENST00000628496 ORMDL2Q53FV1 153 aa8.82□□□□□ -1
SOX2-OT-248ENST00000628496 FAM30AQ9NZY2 134 aa8.82□□□□□ -1
SOX2-OT-248ENST00000628496 TMA7Q9Y2S6 64 aaKnown RBP8.82□□□□□ -1
SOX2-OT-248ENST00000628496 HSPG2P98160 4391 aa8.82□□□□□ -1
SOX2-OT-248ENST00000628496 C1orf196B1AJZ1 125 aa8.81□□□□□ -1
SOX2-OT-248ENST00000628496 K7EMI3 77 aa8.81□□□□□ -1
SOX2-OT-248ENST00000628496 HAMPP81172 84 aa8.81□□□□□ -1
SOX2-OT-248ENST00000628496 CD164L2Q6UWJ8 174 aa8.81□□□□□ -1
SOX2-OT-248ENST00000628496 C2orf66Q6UXQ4 117 aa8.81□□□□□ -1
SOX2-OT-248ENST00000628496 PYGO1Q9Y3Y4 419 aa8.81□□□□□ -1
SOX2-OT-248ENST00000628496 IGLV4-3A0A075B6K6 122 aa8.8□□□□□ -1
SOX2-OT-248ENST00000628496 Q6ZSA8 131 aa8.8□□□□□ -1
SOX2-OT-248ENST00000628496 CBLN2Q8IUK8 224 aa8.8□□□□□ -1
SOX2-OT-248ENST00000628496 CYSLTR1Q9Y271 337 aa8.8□□□□□ -1
SOX2-OT-248ENST00000628496 TRAPPC1Q9Y5R8 145 aa8.8□□□□□ -1
SOX2-OT-248ENST00000628496 LINC01546A6NGU7 62 aa8.79□□□□□ -1
SOX2-OT-248ENST00000628496 SLPIP03973 132 aa8.79□□□□□ -1
SOX2-OT-248ENST00000628496 CNBPP62633 177 aaKnown RBP8.79□□□□□ -1
SOX2-OT-248ENST00000628496 HIGD2BQ4VC39 106 aa8.79□□□□□ -1
SOX2-OT-248ENST00000628496 CFAP161Q6P656 301 aa8.79□□□□□ -1
SOX2-OT-248ENST00000628496 PRSS3P2Q8NHM4 247 aa8.79□□□□□ -1
SOX2-OT-248ENST00000628496 GVQW2A0A096LPI5 108 aaPredicted RBP8.78□□□□□ -1
SOX2-OT-248ENST00000628496 IFITM10A6NMD0 228 aa8.78□□□□□ -1
SOX2-OT-248ENST00000628496 IGIPA6NJ69 53 aa8.77□□□□□ -1.01
SOX2-OT-248ENST00000628496 C9orf163Q8N9P6 203 aa8.77□□□□□ -1.01
SOX2-OT-248ENST00000628496 TMEM141Q96I45 108 aa8.77□□□□□ -1.01
SOX2-OT-248ENST00000628496 SMCO4Q9NRQ5 59 aa8.77□□□□□ -1.01
SOX2-OT-248ENST00000628496 IGHV1-58A0A0C4DH39 117 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms